CGI_10012209 (Crassostrea gigas)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 CGI_10012209 T205829_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
En2
M00484_2.00
Mus musculus
NNYHATHN

NDATDRNN
PBM
Berger et al.(2008)
En2_0952
0.823 0.737
EN2
M03189_2.00
Homo sapiens
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
EN2_1
0.823 0.737
EN2
M03190_2.00
Homo sapiens
VBTAATTRNN

NNYAATTAVB
SELEX
Jolma et al.(2013)
EN2_2
0.823 0.737
En2
M03276_2.00
Mus musculus
VBTAATTASN

NSTAATTAVB
SELEX
Jolma et al.(2013)
En2_1
0.823 0.737
EN2
M05237_2.00
Homo sapiens
BTAATTRV

BYAATTAV
SELEX
Yin et al.(2017)
EN2_eDBD_HT-SELEX
0.823 0.737
EN2
M05238_2.00
Homo sapiens
VHTDAYGHB

VDCRTHADB
SELEX
Yin et al.(2017)
EN2_eDBD_Methyl-HT-SELEX_1
0.823 0.737
EN2
M05239_2.00
Homo sapiens
BTAATTRV

BYAATTAV
SELEX
Yin et al.(2017)
EN2_eDBD_Methyl-HT-SELEX_2
0.823 0.737
En1
M00519_2.00
Mus musculus
HNWTNNN

NNNAWND
PBM
Berger et al.(2008)
En1_3123
0.823 0.719
EN1
M03180_2.00
Homo sapiens
NNTAATTRVB

VBYAATTANN
SELEX
Jolma et al.(2013)
EN1_1
0.823 0.719
EN1
M03181_2.00
Homo sapiens
TAATTRSNYAATTA

TAATTRNSYAATTA
SELEX
Jolma et al.(2013)
EN1_2
0.823 0.719
EN1
M03182_2.00
Homo sapiens
BTAATTRN

NYAATTAV
SELEX
Jolma et al.(2013)
EN1_3
0.823 0.719
EN1
M03183_2.00
Homo sapiens
TDAKKRSNYMATTA

TAATKRNSYMMTHA
SELEX
Jolma et al.(2013)
EN1_4
0.823 0.719
EN1
M05218_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
EN1_eDBD_HT-SELEX
0.823 0.719
EN1
M05871_2.00
Homo sapiens
VNYAATTA

TAATTRNB
SMiLE-seq
Isakova et al.(2017)
EN1
0.823 0.719
EN1
M10714_2.00
Homo sapiens
RTDDTBB

VVAHHAY
Transfac
Matys et al.(2006)
V$EN1_01
0.823 0.719
EN1
M05219_2.00
Homo sapiens
NTAAYGAB

VTCRTTAN
SELEX
Yin et al.(2017)
EN1_eDBD_Methyl-HT-SELEX_1
0.823 0.719
EN1
M05220_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
EN1_eDBD_Methyl-HT-SELEX_2
0.823 0.719
en
M03793_2.00
Drosophila melanogaster
NTAATTRN

NYAATTAN
SELEX
Nitta et al.(2015)
en_1
0.820 0.702
en
M06485_2.00
Drosophila melanogaster
YTAATTR

YAATTAR
B1H
Mathelier et al.(2014)
MA0220.1
0.820 0.702
en
M06236_2.00
Drosophila melanogaster
NYTAATTR

YAATTARN
B1H
Zhu et al.(2011)
En_Cell_FBgn0000577
0.820 0.702
en
M06237_2.00
Drosophila melanogaster
DBTAATKR

YMATTAVH
B1H
Zhu et al.(2011)
en_FlyReg_FBgn0000577
0.820 0.702
en
M06238_2.00
Drosophila melanogaster
NNNTAATTRN

NYAATTANNN
B1H
Zhu et al.(2011)
en_SOLEXA_2_FBgn0000577
0.820 0.702
en
M06239_2.00
Drosophila melanogaster
NTAATTR

YAATTAN
B1H
Zhu et al.(2011)
En_SOLEXA_FBgn0000577
0.820 0.702
en
M09677_2.00
Drosophila melanogaster
HTAATTRN

NYAATTAD
Misc
Kulakovskiy et al.(2009)
en
0.820 0.702
en
M10785_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$EN_Q6
0.820 0.702
inv
M06491_2.00
Drosophila melanogaster
DYTAATTR

YAATTARH
B1H
Mathelier et al.(2014)
MA0229.1
0.820 0.684
inv
M06255_2.00
Drosophila melanogaster
DYTAATTR

YAATTARH
B1H
Zhu et al.(2011)
Inv_Cell_FBgn0001269
0.820 0.684
inv
M06256_2.00
Drosophila melanogaster
NHTAATTRV

BYAATTADN
B1H
Zhu et al.(2011)
inv_SOLEXA_2_FBgn0001269
0.820 0.684
inv
M06257_2.00
Drosophila melanogaster
NHTAATTRV

BYAATTADN
B1H
Zhu et al.(2011)
inv_SOLEXA_5_FBgn0001269
0.820 0.684
Gbx2
M00462_2.00
Mus musculus
NNDAHNN

NNDTHNN
PBM
Berger et al.(2008)
Gbx2_3110
0.735 0.526
Gbx1
M00525_2.00
Mus musculus
NNTAATNR

YNATTANN
PBM
Berger et al.(2008)
Gbx1_2883
0.735 0.526
GBX1
M03193_2.00
Homo sapiens
NBTAATTRSB

VSYAATTAVN
SELEX
Jolma et al.(2013)
GBX1_1
0.735 0.526
GBX2
M03201_2.00
Homo sapiens
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
GBX2_1
0.735 0.526
GBX2
M03202_2.00
Homo sapiens
TAATTRVBCAATWA

TWATTGVBYAATTA
SELEX
Jolma et al.(2013)
GBX2_2
0.735 0.526
GBX2
M03203_2.00
Homo sapiens
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
GBX2_3
0.735 0.526
Gbx1
M03286_2.00
Mus musculus
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
Gbx1_1
0.735 0.526
Gbx2
M03268_2.00
Mus musculus
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
Gbx2_1
0.735 0.526
unpg
M03836_2.00
Drosophila melanogaster
SSTAATYRVN

NBYRATTASS
SELEX
Nitta et al.(2015)
unpg_1
0.735 0.526
GBX2
M05265_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
GBX2_eDBD_HT-SELEX
0.735 0.526
GBX2
M05268_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
GBX2_FL_HT-SELEX
0.735 0.526
unpg
M06517_2.00
Drosophila melanogaster
BTAATTR

YAATTAV
B1H
Mathelier et al.(2014)
MA0251.1
0.735 0.526
unpg
M06311_2.00
Drosophila melanogaster
NBTAATTR

YAATTAVN
B1H
Zhu et al.(2011)
Unpg_Cell_FBgn0015561
0.735 0.526
unpg
M06312_2.00
Drosophila melanogaster
HTAATTR

YAATTAD
B1H
Zhu et al.(2011)
Unpg_SOLEXA_FBgn0015561
0.735 0.526
GBX2
M05266_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
GBX2_eDBD_Methyl-HT-SELEX_1
0.735 0.526
GBX2
M05267_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
GBX2_eDBD_Methyl-HT-SELEX_2
0.735 0.526
GBX2
M05269_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
GBX2_FL_Methyl-HT-SELEX_1
0.735 0.526
GBX2
M05270_2.00
Homo sapiens
NTAAYGAB

VTCRTTAN
SELEX
Yin et al.(2017)
GBX2_FL_Methyl-HT-SELEX_2
0.735 0.526
Otp
M00417_2.00
Mus musculus
NNHAATND

HNATTDNN
PBM
Berger et al.(2008)
Otp_3496
0.727 0.456
otp
M03834_2.00
Drosophila melanogaster
BTAATTRN

NYAATTAV
SELEX
Nitta et al.(2015)
otp_1
0.722 0.439
otp
M03835_2.00
Drosophila melanogaster
YTAATTRV

BYAATTAR
SELEX
Nitta et al.(2015)
otp_2
0.722 0.439
otp
M06516_2.00
Drosophila melanogaster
YTAATTA

TAATTAR
B1H
Mathelier et al.(2014)
MA0236.1
0.722 0.439
otp
M06309_2.00
Drosophila melanogaster
HYTAATTA

TAATTARD
B1H
Zhu et al.(2011)
Otp_Cell_FBgn0015524
0.722 0.439
otp
M06310_2.00
Drosophila melanogaster
YTAATTR

YAATTAR
B1H
Zhu et al.(2011)
Otp_SOLEXA_FBgn0015524
0.722 0.439
Pdx1
M00446_2.00
Mus musculus
NWRAYNNN

NNNRTYWN
PBM
Berger et al.(2008)
Ipf1_3815
0.719 0.544
SPU_026099
M02175_2.00
Strongylocentrotus purpuratus
KTAATTRB

VYAATTAM
PBM
Weirauch et al.(2014)
pTH6140
0.719 0.544
PDX1
M03155_2.00
Homo sapiens
NTAATTRNNNYTAATTRN

NYAATTARNNNYAATTAN
SELEX
Jolma et al.(2013)
PDX1_1
0.719 0.544
PDX1
M03156_2.00
Homo sapiens
BTAATKRN

NYMATTAV
SELEX
Jolma et al.(2013)
PDX1_2
0.719 0.544
PDX1
M05161_2.00
Homo sapiens
YTAATKRB

VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_HT-SELEX
0.719 0.544
PDX1
M09147_2.00
Homo sapiens
TGATWGATK

MATCWATCA
Misc
Kulakovskiy et al.(2013)
PDX1_HUMAN.H11MO.0.A
0.719 0.544
Pdx1
M09192_2.00
Mus musculus
VYTAATGRB

VYCATTARB
Misc
Kulakovskiy et al.(2013)
PDX1_MOUSE.H11MO.0.B
0.719 0.544
Pdx1
M09571_2.00
Mus musculus
TGATTRATKR

YMATYAATCA
Misc
Heinz et al.(2010)
Islet-Pdx1_SRA008281
0.719 0.544
PDX1
M10699_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_01
0.719 0.544
PDX1
M10700_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_02
0.719 0.544
PDX1
M10701_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_03
0.719 0.544
PDX1
M10702_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_04
0.719 0.544
PDX1
M10703_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_05
0.719 0.544
PDX1
M10704_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4_01
0.719 0.544
PDX1
M10705_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4
0.719 0.544
PDX1
M10706_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5_01
0.719 0.544
PDX1
M10707_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5
0.719 0.544
PDX1
M10708_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q6
0.719 0.544
PDX1
M05162_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_1
0.719 0.544
PDX1
M05163_2.00
Homo sapiens
YTAATKRB

VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_2
0.719 0.544
Gsx2
M00469_2.00
Mus musculus
NTAATDDNN

NNHHATTAN
PBM
Berger et al.(2008)
Gsh2_3990
0.714 0.579
Hoxb3
M00504_2.00
Mus musculus
NTAATKRNN

NNYMATTAN
PBM
Berger et al.(2008)
Hoxb3_1720
0.714 0.579
GSX1
M03205_2.00
Homo sapiens
NNTAATKRNN

NNYMATTANN
SELEX
Jolma et al.(2013)
GSX1_1
0.714 0.579
GSX2
M03227_2.00
Homo sapiens
NNTAATKRNN

NNYMATTANN
SELEX
Jolma et al.(2013)
GSX2_1
0.714 0.579
HOXB3
M03126_2.00
Homo sapiens
NBTAATKRNN

NNYMATTAVN
SELEX
Jolma et al.(2013)
HOXB3_1
0.714 0.579
GSX1
M05271_2.00
Homo sapiens
NYMATNRN

NYNATKRN
SELEX
Yin et al.(2017)
GSX1_eDBD_HT-SELEX
0.714 0.579
GSX2
M05329_2.00
Homo sapiens
HTAATKRS

SYMATTAD
SELEX
Yin et al.(2017)
GSX2_eDBD_HT-SELEX
0.714 0.579
GSX1
M05272_2.00
Homo sapiens
NTAAYGAB

VTCRTTAN
SELEX
Yin et al.(2017)
GSX1_eDBD_Methyl-HT-SELEX
0.714 0.579
GSX2
M05330_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
GSX2_eDBD_Methyl-HT-SELEX
0.714 0.579
Hoxd3
M00531_2.00
Mus musculus
NTAATNDN

NHNATTAN
PBM
Berger et al.(2008)
Hoxd3_1742
0.714 0.561
Hoxa3
M00172_2.00
Mus musculus
NTAATKRNNN

NNNYMATTAN
PBM
Badis et al.(2009)
Hoxa3_2783
0.714 0.561
Hoxa3
M00532_2.00
Mus musculus
NTAATKRNN

NNYMATTAN
PBM
Berger et al.(2008)
Hoxa3_2783
0.714 0.561
Hoxd3
M03287_2.00
Mus musculus
NNTAATKRNN

NNYMATTANN
SELEX
Jolma et al.(2013)
Hoxd3_1
0.714 0.561
HOXD3
M05101_2.00
Homo sapiens
CTAATTAS

STAATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_HT-SELEX
0.714 0.561
HOXA3
M10651_2.00
Homo sapiens
SVTWNDDKB

VMHHNWABS
Transfac
Matys et al.(2006)
V$HOXA3_01
0.714 0.561
HOXD3
M05102_2.00
Homo sapiens
YTAAYGAY

RTCRTTAR
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_1
0.714 0.561
HOXD3
M05103_2.00
Homo sapiens
CTAATKAC

GTMATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_2
0.714 0.561
unc-4
M03846_2.00
Drosophila melanogaster
TAATTNAATTA

TAATTNAATTA
SELEX
Nitta et al.(2015)
unc-4_1
0.713 0.421
unc-4
M06523_2.00
Drosophila melanogaster
YTAATTR

YAATTAR
B1H
Mathelier et al.(2014)
MA0250.1
0.713 0.421
ind
M06527_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0228.1
0.712 0.561
ind
M06329_2.00
Drosophila melanogaster
YVYTAATKA

TMATTARBR
B1H
Zhu et al.(2011)
Ind_Cell_FBgn0025776
0.712 0.561
zen
M03805_2.00
Drosophila melanogaster
BTAATKRB

VYMATTAV
SELEX
Nitta et al.(2015)
zen_1
0.712 0.544
zen
M06500_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0256.1
0.712 0.544
zen
M06276_2.00
Drosophila melanogaster
NBYTAATKA

TMATTARBN
B1H
Zhu et al.(2011)
Zen_Cell_FBgn0004053
0.712 0.544
zen
M06277_2.00
Drosophila melanogaster
AANWTWAWTG

CAWTWAWNTT
B1H
Zhu et al.(2011)
zen_FlyReg_FBgn0004053
0.712 0.544
zen
M06278_2.00
Drosophila melanogaster
NYTAATKA

TMATTARN
B1H
Zhu et al.(2011)
Zen_SOLEXA_FBgn0004053
0.712 0.544
Isx
M00452_2.00
Mus musculus
NNHDATNN

NNATHDNN
PBM
Berger et al.(2008)
Isx_3445
0.712 0.456
ISX
M00319_2.00
Homo sapiens
DTAATTRK

MYAATTAH
PBM
Barrera et al.(2016)
ISX_REF
0.711 0.439
ISX
M03218_2.00
Homo sapiens
NTAATTARATTAN

NTAATYTAATTAN
SELEX
Jolma et al.(2013)
ISX_1
0.711 0.439
ISX
M03219_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Jolma et al.(2013)
ISX_2
0.711 0.439
ISX
M03220_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
ISX_3
0.711 0.439
ISX
M05304_2.00
Homo sapiens
BTAATTRG

CYAATTAV
SELEX
Yin et al.(2017)
ISX_eDBD_HT-SELEX
0.711 0.439
ISX
M05307_2.00
Homo sapiens
YTAATTRS

SYAATTAR
SELEX
Yin et al.(2017)
ISX_FL_HT-SELEX
0.711 0.439
ISX
M00318_2.00
Homo sapiens
DTAATTRK

MYAATTAH
PBM
Barrera et al.(2016)
ISX_R83Q
0.711 0.439
ISX
M05305_2.00
Homo sapiens
NTAATTAG

CTAATTAN
SELEX
Yin et al.(2017)
ISX_eDBD_Methyl-HT-SELEX_1
0.711 0.439
ISX
M05306_2.00
Homo sapiens
HTAAYGHN

NDCRTTAD
SELEX
Yin et al.(2017)
ISX_eDBD_Methyl-HT-SELEX_2
0.711 0.439
ISX
M05308_2.00
Homo sapiens
YTAATTRS

SYAATTAR
SELEX
Yin et al.(2017)
ISX_FL_Methyl-HT-SELEX_1
0.711 0.439
ISX
M05309_2.00
Homo sapiens
HTAAYGHN

NDCRTTAD
SELEX
Yin et al.(2017)
ISX_FL_Methyl-HT-SELEX_2
0.711 0.439
zen2
M02118_2.00
Drosophila melanogaster
NNTAATKRNN

NNYMATTANN
PBM
Weirauch et al.(2014)
pTH5479
0.711 0.544
zen2
M03806_2.00
Drosophila melanogaster
BTAATKAS

STMATTAV
SELEX
Nitta et al.(2015)
zen2_1
0.711 0.544
zen2
M03807_2.00
Drosophila melanogaster
BTAATKWNNVRNNNNYBNNWMATTAV

BTAATKWNNVRNNNNYBNNWMATTAV
SELEX
Nitta et al.(2015)
zen2_2
0.711 0.544
zen2
M06501_2.00
Drosophila melanogaster
BTAATKA

TMATTAV
B1H
Mathelier et al.(2014)
MA0257.1
0.711 0.544
zen2
M06279_2.00
Drosophila melanogaster
HNBTAATKA

TMATTAVND
B1H
Zhu et al.(2011)
Zen2_Cell_FBgn0004054
0.711 0.544
zen2
M06280_2.00
Drosophila melanogaster
NNNTAATKRN

NYMATTANNN
B1H
Zhu et al.(2011)
zen2_SOLEXA_2_FBgn0004054
0.711 0.544
zen2
M06281_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Zhu et al.(2011)
Zen2_SOLEXA_FBgn0004054
0.711 0.544
Q0N4M8_NEMVE
M02166_2.00
Nematostella vectensis
HTAATKAC

GTMATTAD
PBM
Weirauch et al.(2014)
pTH6215
0.708 0.544
CG32532
M03874_2.00
Drosophila melanogaster
NTAAYBNVRTTAN

NTAAYBNVRTTAN
SELEX
Nitta et al.(2015)
CG32532_1
0.707 0.474
CG32532
M06547_2.00
Drosophila melanogaster
YTAATTR

YAATTAR
B1H
Mathelier et al.(2014)
MA0179.1
0.707 0.474
CG32532
M06370_2.00
Drosophila melanogaster
YTAATTR

YAATTAR
B1H
Zhu et al.(2011)
CG32532_Cell_FBgn0052532
0.707 0.474
CG32532
M06371_2.00
Drosophila melanogaster
HTAATTR

YAATTAD
B1H
Zhu et al.(2011)
CG32532_SOLEXA_FBgn0052532
0.707 0.474
hbn
M03813_2.00
Drosophila melanogaster
HTAATYTAATTAD

HTAATTARATTAD
SELEX
Nitta et al.(2015)
hbn_1
0.707 0.474
hbn
M06506_2.00
Drosophila melanogaster
TTAATTR

YAATTAA
B1H
Mathelier et al.(2014)
MA0226.1
0.707 0.474
hbn
M06291_2.00
Drosophila melanogaster
TWAWTTR

YAAWTWA
B1H
Zhu et al.(2011)
Hbn_Cell_FBgn0008636
0.707 0.474
hbn
M06292_2.00
Drosophila melanogaster
NHTAATTR

YAATTADN
B1H
Zhu et al.(2011)
Hbn_SOLEXA_FBgn0008636
0.707 0.474
CG18599
M06539_2.00
Drosophila melanogaster
HTAATKA

TMATTAD
B1H
Mathelier et al.(2014)
MA0177.1
0.704 0.544
CG18599
M06354_2.00
Drosophila melanogaster
HTAATKA

TMATTAD
B1H
Zhu et al.(2011)
CG18599_Cell_FBgn0038592
0.704 0.544
CG18599
M06355_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Zhu et al.(2011)
CG18599_SOLEXA_FBgn0038592
0.704 0.544
MSX2
M00290_2.00
Homo sapiens
WDATNDNN

NNHNATHW
PBM
Barrera et al.(2016)
MSX2_REF
0.703 0.491
Msx2
M00414_2.00
Mus musculus
HRATKRNN

NNYMATYD
PBM
Berger et al.(2008)
Msx2_3449
0.703 0.491
MSX2
M03127_2.00
Homo sapiens
TAATTRBHWKWTAATTGV

BCAATTAWMWDVYAATTA
SELEX
Jolma et al.(2013)
MSX2_1
0.703 0.491
MSX2
M03128_2.00
Homo sapiens
NTAATTGB

VCAATTAN
SELEX
Jolma et al.(2013)
MSX2_2
0.703 0.491
MSX2
M05060_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
MSX2_eDBD_HT-SELEX
0.703 0.491
MSX2
M10677_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MSX2_Q3
0.703 0.491
MSX2
M10678_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MSX2_Q6
0.703 0.491
MSX2
M00288_2.00
Homo sapiens
NTAATNDN

NHNATTAN
PBM
Barrera et al.(2016)
MSX2_P148H
0.703 0.491
MSX2
M05061_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
MSX2_eDBD_Methyl-HT-SELEX_1
0.703 0.491
MSX2
M05062_2.00
Homo sapiens
NTAAYGAB

VTCRTTAN
SELEX
Yin et al.(2017)
MSX2_eDBD_Methyl-HT-SELEX_2
0.703 0.491
ARX
M00261_2.00
Homo sapiens
NNWRAYNNN

NNNRTYWNN
PBM
Barrera et al.(2016)
ARX_P353L
0.702 0.456
ARX
M00264_2.00
Homo sapiens
NNWRATNNN

NNNATYWNN
PBM
Barrera et al.(2016)
ARX_REF
0.702 0.439
Arx
M00467_2.00
Mus musculus
NTAATTDN

NHAATTAN
PBM
Berger et al.(2008)
Arx_1738
0.702 0.439
ARX
M03076_2.00
Homo sapiens
NTAATYNRATTAN

NTAATYNRATTAN
SELEX
Jolma et al.(2013)
ARX_1
0.702 0.439
Arx
M03269_2.00
Mus musculus
NTAATYNRATTAN

NTAATYNRATTAN
SELEX
Jolma et al.(2013)
Arx_1
0.702 0.439
ARX
M04895_2.00
Homo sapiens
BTAATTRR

YYAATTAV
SELEX
Yin et al.(2017)
ARX_eDBD_HT-SELEX
0.702 0.439
Arx
M10775_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ARX_05
0.702 0.439
ARX
M00262_2.00
Homo sapiens
ATAATTAT

ATAATTAT
PBM
Barrera et al.(2016)
ARX_P353R
0.702 0.439
ARX
M04896_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
ARX_eDBD_Methyl-HT-SELEX
0.702 0.439
ARX
M00260_2.00
Homo sapiens
NMTAATTANNN

NNNTAATTAKN
PBM
Barrera et al.(2016)
ARX_L343Q
0.702 0.421
Msx3
M00429_2.00
Mus musculus
TAATKDNN

NNHMATTA
PBM
Berger et al.(2008)
Msx3_3206
0.701 0.474
Msx1
M00501_2.00
Mus musculus
NHDATND

HNATHDN
PBM
Berger et al.(2008)
Msx1_3031
0.701 0.474
Dr
M00555_2.00
Drosophila melanogaster
TAATTRNN

NNYAATTA
PBM
Busser et al.(2012a)
Msh
0.701 0.474
MSX1
M03184_2.00
Homo sapiens
TAATTRBHHNHTAATTRN

NYAATTADNDDVYAATTA
SELEX
Jolma et al.(2013)
MSX1_1
0.701 0.474
MSX1
M03185_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
MSX1_2
0.701 0.474
MSX1
M03186_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
MSX1_3
0.701 0.474
Msx3
M03255_2.00
Mus musculus
TAATTGSHHNNTAATTRN

NYAATTANNDDSCAATTA
SELEX
Jolma et al.(2013)
Msx3_1
0.701 0.474
Msx3
M03256_2.00
Mus musculus
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
Msx3_2
0.701 0.474
MSX1
M05221_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
MSX1_eDBD_HT-SELEX
0.701 0.474
MSX1
M05224_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
MSX1_FL_HT-SELEX
0.701 0.474
Dr
M06482_2.00
Drosophila melanogaster
TAATTGS

SCAATTA
B1H
Mathelier et al.(2014)
MA0188.1
0.701 0.474
Dr
M06229_2.00
Drosophila melanogaster
TAATTGSHB

VDSCAATTA
B1H
Zhu et al.(2011)
Dr_Cell_FBgn0000492
0.701 0.474
Dr
M06230_2.00
Drosophila melanogaster
TAATTR

YAATTA
B1H
Zhu et al.(2011)
Dr_SOLEXA_FBgn0000492
0.701 0.474
MSX1
M10715_2.00
Homo sapiens
HNBTWWNTG

CANWWAVND
Transfac
Matys et al.(2006)
V$MSX1_01
0.701 0.474
MSX1
M10716_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MSX1_Q5_01
0.701 0.474
MSX1
M10717_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MSX1_Q5
0.701 0.474
MSX1
M05222_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
MSX1_eDBD_Methyl-HT-SELEX_1
0.701 0.474
MSX1
M05223_2.00
Homo sapiens
NTWAYGMB

VKCRTWAN
SELEX
Yin et al.(2017)
MSX1_eDBD_Methyl-HT-SELEX_2
0.701 0.474
MSX1
M05225_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
MSX1_FL_Methyl-HT-SELEX_1
0.701 0.474
MSX1
M05226_2.00
Homo sapiens
NTWAYGWB

VWCRTWAN
SELEX
Yin et al.(2017)
MSX1_FL_Methyl-HT-SELEX_2
0.701 0.474
repo
M03826_2.00
Drosophila melanogaster
VTTAATTARB

VYTAATTAAB
SELEX
Nitta et al.(2015)
repo_1
0.699 0.474
repo
M03827_2.00
Drosophila melanogaster
VKYAATTRRN

NYYAATTRMB
SELEX
Nitta et al.(2015)
repo_2
0.699 0.474
repo
M03828_2.00
Drosophila melanogaster
VBYAATTRVNNBYAATTRVB

VBYAATTRVNNBYAATTRVB
SELEX
Nitta et al.(2015)
repo_3
0.699 0.474
repo
M06511_2.00
Drosophila melanogaster
TTAATTA

TAATTAA
B1H
Mathelier et al.(2014)
MA0240.1
0.699 0.474
repo
M06301_2.00
Drosophila melanogaster
DTTAATTA

TAATTAAH
B1H
Zhu et al.(2011)
Repo_Cell_FBgn0011701
0.699 0.474
repo
M06302_2.00
Drosophila melanogaster
YTAATTR

YAATTAR
B1H
Zhu et al.(2011)
Repo_SOLEXA_FBgn0011701
0.699 0.474
OdsH
M03851_2.00
Drosophila melanogaster
NTAATTRN

NYAATTAN
SELEX
Nitta et al.(2015)
OdsH_1
0.697 0.439
OdsH
M03852_2.00
Drosophila melanogaster
TAATBNVATTA

TAATBNVATTA
SELEX
Nitta et al.(2015)
OdsH_2
0.697 0.439
OdsH
M06528_2.00
Drosophila melanogaster
BTAATTR

YAATTAV
B1H
Mathelier et al.(2014)
MA0198.1
0.697 0.439
OdsH
M06330_2.00
Drosophila melanogaster
BTAATTR

YAATTAV
B1H
Zhu et al.(2011)
Odsh_Cell_FBgn0026058
0.697 0.439
OdsH
M06331_2.00
Drosophila melanogaster
NHTAATTR

YAATTADN
B1H
Zhu et al.(2011)
Odsh_SOLEXA_FBgn0026058
0.697 0.439
Uncx
M00443_2.00
Mus musculus
NTAATNDN

NHNATTAN
PBM
Berger et al.(2008)
Uncx4
0.697 0.404
uncx
M02111_2.00
Tetraodon nigroviridis
NNTAATTRN

NYAATTANN
PBM
Weirauch et al.(2014)
pTH5474
0.697 0.404
UNCX
M03191_2.00
Homo sapiens
NWAATTVVRTHWN

NWDAYBBAATTWN
SELEX
Jolma et al.(2013)
UNCX_1
0.697 0.404
UNCX
M03192_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
UNCX_2
0.697 0.404
Uncx
M03264_2.00
Mus musculus
NTAATTVRATTAN

NTAATYBAATTAN
SELEX
Jolma et al.(2013)
Uncx_1
0.697 0.404
Uncx
M03265_2.00
Mus musculus
NTAATTRR

YYAATTAN
SELEX
Jolma et al.(2013)
Uncx_2
0.697 0.404
UNCX
M05240_2.00
Homo sapiens
NYAATTRV

BYAATTRN
SELEX
Yin et al.(2017)
UNCX_eDBD_HT-SELEX
0.697 0.404
UNCX
M05241_2.00
Homo sapiens
NYRRYKNN

NNMRYYRN
SELEX
Yin et al.(2017)
UNCX_eDBD_Methyl-HT-SELEX
0.697 0.404
CG5369
M03876_2.00
Drosophila melanogaster
TAATTHVATTA

TAATBDAATTA
SELEX
Nitta et al.(2015)
CG5369_1
0.697 0.439
CG5369
M03877_2.00
Drosophila melanogaster
TAATTRNNTAATBN

NVATTANNYAATTA
SELEX
Nitta et al.(2015)
CG5369_2
0.697 0.439
CG5369
M03878_2.00
Drosophila melanogaster
TAATTVRATWA

TWATYBAATTA
SELEX
Nitta et al.(2015)
CG5369_3
0.697 0.439
ESX1
M00292_2.00
Homo sapiens
NNTAATNDN

NHNATTANN
PBM
Barrera et al.(2016)
ESX1_REF
0.696 0.474
ESX1
M03137_2.00
Homo sapiens
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
ESX1_1
0.696 0.474
ESX1
M03138_2.00
Homo sapiens
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
ESX1_2
0.696 0.474
ESX1
M05087_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
ESX1_eDBD_HT-SELEX
0.696 0.474
ESX1
M05089_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
ESX1_FL_HT-SELEX
0.696 0.474
ESX1
M05088_2.00
Homo sapiens
NTAATTRR

YYAATTAN
SELEX
Yin et al.(2017)
ESX1_eDBD_Methyl-HT-SELEX
0.696 0.474
ESX1
M05090_2.00
Homo sapiens
NTAATTRR

YYAATTAN
SELEX
Yin et al.(2017)
ESX1_FL_Methyl-HT-SELEX
0.696 0.474
PROP1
M00317_2.00
Homo sapiens
HAAYNNNNNN

NNNNNNRTTD
PBM
Barrera et al.(2016)
PROP1_REF
0.696 0.456
PROP1
M03216_2.00
Homo sapiens
TAATTHRATTA

TAATYDAATTA
SELEX
Jolma et al.(2013)
PROP1_1
0.696 0.456
PROP1
M03217_2.00
Homo sapiens
TAATKNRRTTA

TAAYYNMATTA
SELEX
Jolma et al.(2013)
PROP1_2
0.696 0.456
PROP1
M05298_2.00
Homo sapiens
WAATTNNRTTD

HAAYNNAATTW
SELEX
Yin et al.(2017)
PROP1_eDBD_HT-SELEX
0.696 0.456
PROP1
M05301_2.00
Homo sapiens
TAATTNVATTA

TAATBNAATTA
SELEX
Yin et al.(2017)
PROP1_FL_HT-SELEX
0.696 0.456
PROP1
M10777_2.00
Sus scrofa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PROP1_01
0.696 0.456
PROP1
M10737_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PROP1_Q2
0.696 0.456
PROP1
M00315_2.00
Homo sapiens
NNHNATNN

NNATNDNN
PBM
Barrera et al.(2016)
PROP1_R112Q
0.696 0.456
PROP1
M05299_2.00
Homo sapiens
TAATTNVRTTW

WAAYBNAATTA
SELEX
Yin et al.(2017)
PROP1_eDBD_Methyl-HT-SELEX_1
0.696 0.456
PROP1
M05300_2.00
Homo sapiens
TAAYNDCRTTA

TAAYGHNRTTA
SELEX
Yin et al.(2017)
PROP1_eDBD_Methyl-HT-SELEX_2
0.696 0.456
PROP1
M05302_2.00
Homo sapiens
TAATTNVRTTA

TAAYBNAATTA
SELEX
Yin et al.(2017)
PROP1_FL_Methyl-HT-SELEX_1
0.696 0.456
PROP1
M05303_2.00
Homo sapiens
TAATYRVRTTA

TAAYBYRATTA
SELEX
Yin et al.(2017)
PROP1_FL_Methyl-HT-SELEX_2
0.696 0.456
Prop1
M00498_2.00
Mus musculus
NRAKDDN

NHHMTYN
PBM
Berger et al.(2008)
Prop1_3949
0.696 0.439
Prop1
M09210_2.00
Mus musculus
TAATKRRATTA

TAATYYMATTA
Misc
Kulakovskiy et al.(2013)
PROP1_MOUSE.H11MO.0.C
0.696 0.439
SHOX
M02095_2.00
Homo sapiens
NTAATTRN

NYAATTAN
PBM
Weirauch et al.(2014)
pTH5805
0.696 0.439
Shox2
M00439_2.00
Mus musculus
NTAATDDN

NHHATTAN
PBM
Berger et al.(2008)
Shox2_2641
0.696 0.439
SHOX
M03232_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
SHOX_1
0.696 0.439
SHOX2
M03204_2.00
Homo sapiens
BTAATTRN

NYAATTAV
SELEX
Jolma et al.(2013)
SHOX2_1
0.696 0.439
Shox2
M03263_2.00
Mus musculus
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
Shox2_1
0.696 0.439
SHOX
M05366_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
SHOX_eDBD_HT-SELEX
0.696 0.439
Shox2
M10772_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SHOX2_05
0.696 0.439
SHOX
M05367_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
SHOX_eDBD_Methyl-HT-SELEX_1
0.696 0.439
SHOX
M05368_2.00
Homo sapiens
NTAAYGAN

NTCRTTAN
SELEX
Yin et al.(2017)
SHOX_eDBD_Methyl-HT-SELEX_2
0.696 0.439
Alx3
M00402_2.00
Mus musculus
WAATNDN

NHNATTW
PBM
Berger et al.(2008)
Alx3_3418
0.696 0.421
ALX3
M03172_2.00
Homo sapiens
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
ALX3_1
0.696 0.421
ALX3
M03173_2.00
Homo sapiens
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
ALX3_2
0.696 0.421
ALX3
M03174_2.00
Homo sapiens
NTAATYNRATTAN

NTAATYNRATTAN
SELEX
Jolma et al.(2013)
ALX3_3
0.696 0.421
ALX3
M05195_2.00
Homo sapiens
NTAATTRR

YYAATTAN
SELEX
Yin et al.(2017)
ALX3_eDBD_HT-SELEX
0.696 0.421
ALX3
M05198_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
ALX3_FL_HT-SELEX
0.696 0.421
ALX3
M05196_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
ALX3_eDBD_Methyl-HT-SELEX_1
0.696 0.421
ALX3
M05197_2.00
Homo sapiens
NTAAYBHN

NDVRTTAN
SELEX
Yin et al.(2017)
ALX3_eDBD_Methyl-HT-SELEX_2
0.696 0.421
ALX3
M05199_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
ALX3_FL_Methyl-HT-SELEX_1
0.696 0.421
ALX3
M05200_2.00
Homo sapiens
NTAAYGHN

NDCRTTAN
SELEX
Yin et al.(2017)
ALX3_FL_Methyl-HT-SELEX_2
0.696 0.421
Alx1
M00471_2.00
Mus musculus
NTAATTRN

NYAATTAN
PBM
Berger et al.(2008)
Cart1_0997
0.696 0.404
Alx1
M00472_2.00
Mus musculus
NTAATDDN

NHHATTAN
PBM
Berger et al.(2008)
Cart1_1275
0.696 0.404
Alx4
M00487_2.00
Mus musculus
NTAATDDN

NHHATTAN
PBM
Berger et al.(2008)
Alx4_1744
0.696 0.404
ALX4
M03079_2.00
Homo sapiens
NTAATYNRRTTAN

NTAAYYNRATTAN
SELEX
Jolma et al.(2013)
ALX4_1
0.696 0.404
ALX1
M03226_2.00
Homo sapiens
NTAATTRVRTTAN

NTAAYBYAATTAN
SELEX
Jolma et al.(2013)
CART1_1
0.696 0.404
Alx1
M03272_2.00
Mus musculus
NNTAATTRRD

HYYAATTANN
SELEX
Jolma et al.(2013)
Alx1_1
0.696 0.404
Alx1
M03273_2.00
Mus musculus
NTAATYNRATTAN

NTAATYNRATTAN
SELEX
Jolma et al.(2013)
Alx1_2
0.696 0.404
Alx4
M03278_2.00
Mus musculus
NTAATYNRATTAN

NTAATYNRATTAN
SELEX
Jolma et al.(2013)
Alx4_1
0.696 0.404
ALX1
M05327_2.00
Homo sapiens
TAATYTAATTA

TAATTARATTA
SELEX
Yin et al.(2017)
ALX1_FL_HT-SELEX
0.696 0.404
ALX4
M04917_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
ALX4_eDBD_HT-SELEX
0.696 0.404
ALX1
M09160_2.00
Homo sapiens
VTAATYRVATTA

TAATBYRATTAB
Misc
Kulakovskiy et al.(2013)
ALX1_HUMAN.H11MO.0.B
0.696 0.404
Alx1
M09201_2.00
Mus musculus
VTAATYRVATTA

TAATBYRATTAB
Misc
Kulakovskiy et al.(2013)
ALX1_MOUSE.H11MO.0.B
0.696 0.404
ALX4
M10637_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ALX4_01
0.696 0.404
ALX1
M10741_2.00
Homo sapiens
VVHTAATKNNHATTABYN

NRVTAATDNNMATTADBB
Transfac
Matys et al.(2006)
V$CART1_01
0.696 0.404
ALX1
M05328_2.00
Homo sapiens
TAATYTAATTA

TAATTARATTA
SELEX
Yin et al.(2017)
ALX1_FL_Methyl-HT-SELEX
0.696 0.404
ALX4
M04918_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
ALX4_eDBD_Methyl-HT-SELEX_1
0.696 0.404
ALX4
M04919_2.00
Homo sapiens
NTWAYGHN

NDCRTWAN
SELEX
Yin et al.(2017)
ALX4_eDBD_Methyl-HT-SELEX_2
0.696 0.404
MSX2
M00289_2.00
Homo sapiens
WDATWDNN

NNHWATHW
PBM
Barrera et al.(2016)
MSX2_R172H
0.695 0.474
ro
M06495_2.00
Drosophila melanogaster
YTAATTA

TAATTAR
B1H
Mathelier et al.(2014)
MA0241.1
0.693 0.596
ro
M06264_2.00
Drosophila melanogaster
NYTAATTA

TAATTARN
B1H
Zhu et al.(2011)
Ro_Cell_FBgn0003267
0.693 0.596
ro
M06265_2.00
Drosophila melanogaster
HTAATTR

YAATTAD
B1H
Zhu et al.(2011)
Ro_SOLEXA_FBgn0003267
0.693 0.596
DRGX
M03199_2.00
Homo sapiens
NTAATTNRATTAN

NTAATYNAATTAN
SELEX
Jolma et al.(2013)
DRGX_1
0.693 0.421
DRGX
M05253_2.00
Homo sapiens
NTAATTRR

YYAATTAN
SELEX
Yin et al.(2017)
DRGX_eDBD_HT-SELEX
0.693 0.421
Drgx
M10774_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRRXL1_01
0.693 0.421
DRGX
M05254_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
DRGX_eDBD_Methyl-HT-SELEX
0.693 0.421
CG2808
M03875_2.00
Drosophila melanogaster
TAATYNSRTTA

TAAYSNRATTA
SELEX
Nitta et al.(2015)
CG2808_1
0.693 0.404
VAX2
M00284_2.00
Homo sapiens
NNTAATND

HNATTANN
PBM
Barrera et al.(2016)
VAX2_REF
0.693 0.596
Vax1
M00398_2.00
Mus musculus
NTAATNDNN

NNHNATTAN
PBM
Berger et al.(2008)
Vax1_3499
0.693 0.596
Vax2
M00464_2.00
Mus musculus
NTAATDDNN

NNHHATTAN
PBM
Berger et al.(2008)
Vax2_3500
0.693 0.596
VAX2
M03119_2.00
Homo sapiens
YTAATKAN

NTMATTAR
SELEX
Jolma et al.(2013)
VAX2_1
0.693 0.596
VAX2
M05030_2.00
Homo sapiens
BTAATTRV

BYAATTAV
SELEX
Yin et al.(2017)
VAX2_FL_HT-SELEX
0.693 0.596
Vax1
M10764_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VAX1_04
0.693 0.596
VAX2
M05031_2.00
Homo sapiens
BTAATTRV

BYAATTAV
SELEX
Yin et al.(2017)
VAX2_FL_Methyl-HT-SELEX
0.693 0.596
Pph13
M03845_2.00
Drosophila melanogaster
NTAATTRN

NYAATTAN
SELEX
Nitta et al.(2015)
Pph13_1
0.693 0.421
Pph13
M06522_2.00
Drosophila melanogaster
NTAATTR

YAATTAN
B1H
Mathelier et al.(2014)
MA0200.1
0.693 0.421
Pph13
M06321_2.00
Drosophila melanogaster
NHTAATTR

YAATTADN
B1H
Zhu et al.(2011)
Pph13_Cell_FBgn0023489
0.693 0.421
Pph13
M06322_2.00
Drosophila melanogaster
YTAATTR

YAATTAR
B1H
Zhu et al.(2011)
Pph13_SOLEXA_FBgn0023489
0.693 0.421
PHDP
M03849_2.00
Drosophila melanogaster
NTAATKNVATTAN

NTAATBNMATTAN
SELEX
Nitta et al.(2015)
PHDP_1
0.693 0.404
PHDP
M06525_2.00
Drosophila melanogaster
HTAATTD

HAATTAD
B1H
Mathelier et al.(2014)
MA0457.1
0.693 0.404
PHDP
M06325_2.00
Drosophila melanogaster
HTAATT

AATTAD
B1H
Zhu et al.(2011)
PhdP_Cell_FBgn0025334
0.693 0.404
PHDP
M06326_2.00
Drosophila melanogaster
YTAATT

AATTAR
B1H
Zhu et al.(2011)
PhdP_SOLEXA_FBgn0025334
0.693 0.404
CG11294
M03855_2.00
Drosophila melanogaster
TAATTVVATTA

TAATBBAATTA
SELEX
Nitta et al.(2015)
CG11294_1
0.692 0.439
CG11294
M03856_2.00
Drosophila melanogaster
TAATTDVATTA

TAATBHAATTA
SELEX
Nitta et al.(2015)
CG11294_2
0.692 0.439
CG11294
M06531_2.00
Drosophila melanogaster
TAATTAA

TTAATTA
B1H
Mathelier et al.(2014)
MA0172.1
0.692 0.439
CG11294
M06337_2.00
Drosophila melanogaster
TAATTAA

TTAATTA
B1H
Zhu et al.(2011)
CG11294_Cell_FBgn0030058
0.692 0.439
CG11294
M06338_2.00
Drosophila melanogaster
HTAATTR

YAATTAD
B1H
Zhu et al.(2011)
CG11294_SOLEXA_FBgn0030058
0.692 0.439
Sebox
M02097_2.00
Mus musculus
NHTTAATTAN

NTAATTAADN
PBM
Weirauch et al.(2014)
pTH6379
0.691 0.421
al
M03776_2.00
Drosophila melanogaster
TAAYBNVRTTA

TAAYBNVRTTA
SELEX
Nitta et al.(2015)
al_1
0.691 0.421
al
M06477_2.00
Drosophila melanogaster
TAATTAA

TTAATTA
B1H
Mathelier et al.(2014)
MA0208.1
0.691 0.421
al
M06212_2.00
Drosophila melanogaster
TAATTAA

TTAATTA
B1H
Zhu et al.(2011)
Al_Cell_FBgn0000061
0.691 0.421
al
M06213_2.00
Drosophila melanogaster
NNYTAATTR

YAATTARNN
B1H
Zhu et al.(2011)
Al_SOLEXA_FBgn0000061
0.691 0.421
PHOX2B
M00281_2.00
Homo sapiens
NNNNNNNNRY

RYNNNNNNNN
PBM
Barrera et al.(2016)
PHOX2B_R141Q
0.691 0.421
VSX1
M00269_2.00
Homo sapiens
NNWAAYNNN

NNNRTTWNN
PBM
Barrera et al.(2016)
VSX1_REF
0.691 0.404
PHOX2B
M00282_2.00
Homo sapiens
TAATTRRY

RYYAATTA
PBM
Barrera et al.(2016)
PHOX2B_REF
0.691 0.404
VSX2
M00287_2.00
Homo sapiens
NYTAATTARN

NYTAATTARN
PBM
Barrera et al.(2016)
VSX2_REF
0.691 0.404
Phox2a
M00400_2.00
Mus musculus
NNHAAYNN

NNRTTDNN
PBM
Berger et al.(2008)
Phox2a_3947
0.691 0.404
Phox2b
M00401_2.00
Mus musculus
NNHAAYNN

NNRTTDNN
PBM
Berger et al.(2008)
Phox2b_3948
0.691 0.404
Vsx1
M00459_2.00
Mus musculus
NNTAATDDN

NHHATTANN
PBM
Berger et al.(2008)
Vsx1_1728
0.691 0.404
PHOX2A
M03194_2.00
Homo sapiens
TAATTRVRTTA

TAAYBYAATTA
SELEX
Jolma et al.(2013)
PHOX2A_1
0.691 0.404
PHOX2B
M03113_2.00
Homo sapiens
TAATTRVRTTA

TAAYBYAATTA
SELEX
Jolma et al.(2013)
PHOX2B_1
0.691 0.404
PHOX2B
M03114_2.00
Homo sapiens
TAATTRVRTTA

TAAYBYAATTA
SELEX
Jolma et al.(2013)
PHOX2B_2
0.691 0.404
VSX2
M03124_2.00
Homo sapiens
YTAATTAN

NTAATTAR
SELEX
Jolma et al.(2013)
VSX2_1
0.691 0.404
Vsx1
M03267_2.00
Mus musculus
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
Vsx1_1
0.691 0.404
PHOX2A
M05244_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
PHOX2A_eDBD_HT-SELEX
0.691 0.404
PHOX2B
M05008_2.00
Homo sapiens
BTAATYRV

BYRATTAV
SELEX
Yin et al.(2017)
PHOX2B_eDBD_HT-SELEX
0.691 0.404
PHOX2B
M05010_2.00
Homo sapiens
TAATTWRATTA

TAATYWAATTA
SELEX
Yin et al.(2017)
PHOX2B_FL_HT-SELEX
0.691 0.404
VSX2
M05036_2.00
Homo sapiens
CTAATTAN

NTAATTAG
SELEX
Yin et al.(2017)
VSX2_eDBD_HT-SELEX
0.691 0.404
VSX2
M05039_2.00
Homo sapiens
GCYAATYWY

RWRATTRGC
SELEX
Yin et al.(2017)
VSX2_FL_HT-SELEX
0.691 0.404
Vsx2
M09180_2.00
Mus musculus
NNRGCTAATTAR

YTAATTAGCYNN
Misc
Kulakovskiy et al.(2013)
VSX2_MOUSE.H11MO.0.C
0.691 0.404
Phox2a
M09564_2.00
Mus musculus
NTAATBNRATTA

TAATYNVATTAN
Misc
Heinz et al.(2010)
Neuron-Phox2a_GSE31456
0.691 0.404
VSX2
M10676_2.00
Homo sapiens
HNNGCTAATTANBN

NVNTAATTAGCNND
Transfac
Matys et al.(2006)
V$CHX10_01
0.691 0.404
VSX1
M00266_2.00
Homo sapiens
NNTAAYNNN

NNNRTTANN
PBM
Barrera et al.(2016)
VSX1_G160D
0.691 0.404
PHOX2B
M00278_2.00
Homo sapiens
NNNNNRY

RYNNNNN
PBM
Barrera et al.(2016)
PHOX2B_Q143R
0.691 0.404
PHOX2B
M00280_2.00
Homo sapiens
NNNHATAAWTDNN

NNHAWTTATDNNN
PBM
Barrera et al.(2016)
PHOX2B_R141G
0.691 0.404
PHOX2A
M05245_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
PHOX2A_eDBD_Methyl-HT-SELEX
0.691 0.404
PHOX2B
M05009_2.00
Homo sapiens
BTAATYRN

NYRATTAV
SELEX
Yin et al.(2017)
PHOX2B_eDBD_Methyl-HT-SELEX
0.691 0.404
PHOX2B
M05011_2.00
Homo sapiens
TAATTHRATTA

TAATYDAATTA
SELEX
Yin et al.(2017)
PHOX2B_FL_Methyl-HT-SELEX
0.691 0.404
VSX2
M05037_2.00
Homo sapiens
VYAATTRR

YYAATTRB
SELEX
Yin et al.(2017)
VSX2_eDBD_Methyl-HT-SELEX_1
0.691 0.404
VSX2
M05038_2.00
Homo sapiens
NTAAYKHN

NDMRTTAN
SELEX
Yin et al.(2017)
VSX2_eDBD_Methyl-HT-SELEX_2
0.691 0.404
VSX2
M05040_2.00
Homo sapiens
NTAAYKVN

NBMRTTAN
SELEX
Yin et al.(2017)
VSX2_FL_Methyl-HT-SELEX_1
0.691 0.404
VSX2
M05041_2.00
Homo sapiens
GCYAATYWY

RWRATTRGC
SELEX
Yin et al.(2017)
VSX2_FL_Methyl-HT-SELEX_2
0.691 0.404
VSX2
M00285_2.00
Homo sapiens
NDTWTATTHNNN

NNNDAATAWAHN
PBM
Barrera et al.(2016)
VSX2_R200P
0.691 0.386
VSX2
M00286_2.00
Homo sapiens
YRWKWNN

NNWMWYR
PBM
Barrera et al.(2016)
VSX2_R200Q
0.691 0.386
zfhx4
M02108_2.00
Tetraodon nigroviridis
NNTAATTRN

NYAATTANN
PBM
Weirauch et al.(2014)
pTH5654
0.690 0.421
PROP1
M00316_2.00
Homo sapiens
DTAATTRK

MYAATTAH
PBM
Barrera et al.(2016)
PROP1_R99Q
0.688 0.439
VAX2
M00283_2.00
Homo sapiens
NNTAAWNDNN

NNHNWTTANN
PBM
Barrera et al.(2016)
VAX2_L139M
0.687 0.579
Nkx1-1
M00442_2.00
Mus musculus
NNTAATNDNN

NNHNATTANN
PBM
Berger et al.(2008)
Nkx1-1_3856
0.686 0.526
Nkx1-2
M00503_2.00
Mus musculus
NNTAAWNDN

NHNWTTANN
PBM
Berger et al.(2008)
Nkx1-2_3214
0.686 0.526
slou
M00557_2.00
Drosophila melanogaster
NNTAATDRN

NYHATTANN
PBM
Busser et al.(2012a)
Slou
0.686 0.526
slou
M03798_2.00
Drosophila melanogaster
VBTAATTRSB

VSYAATTAVB
SELEX
Nitta et al.(2015)
slou_1
0.686 0.526
slou
M06494_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Mathelier et al.(2014)
MA0245.1
0.686 0.526
slou
M06262_2.00
Drosophila melanogaster
BYTAATKR

YMATTARV
B1H
Zhu et al.(2011)
Slou_Cell_FBgn0002941
0.686 0.526
slou
M06263_2.00
Drosophila melanogaster
HTAATKR

YMATTAD
B1H
Zhu et al.(2011)
Slou_SOLEXA_FBgn0002941
0.686 0.526
ems
M02114_2.00
Drosophila melanogaster
NTAATKRNB

VNYMATTAN
PBM
Weirauch et al.(2014)
pTH5673
0.684 0.544
ems
M03789_2.00
Drosophila melanogaster
BTAATTAN

NTAATTAV
SELEX
Nitta et al.(2015)
ems_1
0.684 0.544
ems
M03790_2.00
Drosophila melanogaster
BTAATTAVBVBTAATKRN

NYMATTAVBVBTAATTAV
SELEX
Nitta et al.(2015)
ems_2
0.684 0.544
ems
M03791_2.00
Drosophila melanogaster
BTAATKRN

NYMATTAV
SELEX
Nitta et al.(2015)
ems_3
0.684 0.544
ems
M03792_2.00
Drosophila melanogaster
STAATKRSSSSTAATKRV

BYMATTASSSSYMATTAS
SELEX
Nitta et al.(2015)
ems_4
0.684 0.544
ems
M06484_2.00
Drosophila melanogaster
HTAATKR

YMATTAD
B1H
Mathelier et al.(2014)
MA0219.1
0.684 0.544
ems
M06233_2.00
Drosophila melanogaster
WHTAATKR

YMATTADW
B1H
Zhu et al.(2011)
Ems_Cell_FBgn0000576
0.684 0.544
ems
M06234_2.00
Drosophila melanogaster
TSTMATHM

KDATKASA
B1H
Zhu et al.(2011)
ems_FlyReg_FBgn0000576
0.684 0.544
ems
M06235_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Zhu et al.(2011)
Ems_SOLEXA_FBgn0000576
0.684 0.544
ems
M09676_2.00
Drosophila melanogaster
WTWATGA

TCATWAW
Misc
Kulakovskiy et al.(2009)
ems
0.684 0.544
NEMVEDRAFT_v1g205636
M02150_2.00
Nematostella vectensis
NTAATTAN

NTAATTAN
PBM
Weirauch et al.(2014)
pTH5491
0.684 0.509
NEMVEDRAFT_v1g8907
M02154_2.00
Nematostella vectensis
NTAATDRNNN

NNNYHATTAN
PBM
Weirauch et al.(2014)
pTH6483
0.684 0.596
EMX1
M02088_2.00
Homo sapiens
NNTAATKANN

NNTMATTANN
PBM
Weirauch et al.(2014)
pTH5677
0.682 0.544
EMX1
M03151_2.00
Homo sapiens
NBTAATTRNN

NNYAATTAVN
SELEX
Jolma et al.(2013)
EMX1_1
0.682 0.544
EMX1
M03152_2.00
Homo sapiens
YMATTARYTAATKR

YMATTARYTAATKR
SELEX
Jolma et al.(2013)
EMX1_2
0.682 0.544
EMX1
M05145_2.00
Homo sapiens
BTAATTAN

NTAATTAV
SELEX
Yin et al.(2017)
EMX1_eDBD_HT-SELEX
0.682 0.544
EMX1
M05147_2.00
Homo sapiens
BTAATTAV

BTAATTAV
SELEX
Yin et al.(2017)
EMX1_FL_HT-SELEX
0.682 0.544
EMX1
M05146_2.00
Homo sapiens
BTAATTRN

NYAATTAV
SELEX
Yin et al.(2017)
EMX1_eDBD_Methyl-HT-SELEX
0.682 0.544
EMX1
M05148_2.00
Homo sapiens
BTAATTAN

NTAATTAV
SELEX
Yin et al.(2017)
EMX1_FL_Methyl-HT-SELEX
0.682 0.544
Emx2
M00495_2.00
Mus musculus
NTAATDDNN

NNHHATTAN
PBM
Berger et al.(2008)
Emx2_3420
0.682 0.526
EMX2
M03210_2.00
Homo sapiens
NBTAATTANN

NNTAATTAVN
SELEX
Jolma et al.(2013)
EMX2_1
0.682 0.526
EMX2
M03211_2.00
Homo sapiens
YMATTARBTAATKR

YMATTAVYTAATKR
SELEX
Jolma et al.(2013)
EMX2_2
0.682 0.526
EMX2
M05281_2.00
Homo sapiens
YTAATKAB

VTMATTAR
SELEX
Yin et al.(2017)
EMX2_eDBD_HT-SELEX
0.682 0.526
EMX2
M05282_2.00
Homo sapiens
YTAATKAN

NTMATTAR
SELEX
Yin et al.(2017)
EMX2_eDBD_Methyl-HT-SELEX
0.682 0.526
Dfd
M03784_2.00
Drosophila melanogaster
VNTAAYKRBN

NVYMRTTANB
SELEX
Nitta et al.(2015)
Dfd_1
0.679 0.579
Dfd
M03785_2.00
Drosophila melanogaster
VYTAATKAYN

NRTMATTARB
SELEX
Nitta et al.(2015)
Dfd_2
0.679 0.579
HOXD4
M05273_2.00
Homo sapiens
NTMATKRV

BYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_HT-SELEX
0.679 0.579
HOXD4
M05276_2.00
Homo sapiens
NTAATKRB

VYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_HT-SELEX
0.679 0.579
Dfd
M06481_2.00
Drosophila melanogaster
YTAATGA

TCATTAR
B1H
Mathelier et al.(2014)
MA0186.1
0.679 0.579
Dfd
M06226_2.00
Drosophila melanogaster
VYTAATGA

TCATTAAB
B1H
Zhu et al.(2011)
Dfd_Cell_FBgn0000439
0.679 0.579
Dfd
M06227_2.00
Drosophila melanogaster
TTAATKRY

RYMATTAA
B1H
Zhu et al.(2011)
Dfd_FlyReg_FBgn0000439
0.679 0.579
Dfd
M06228_2.00
Drosophila melanogaster
NBTAATKR

YMATTAVN
B1H
Zhu et al.(2011)
Dfd_SOLEXA_FBgn0000439
0.679 0.579
Dfd
M09675_2.00
Drosophila melanogaster
TTAATKRB

VYMATTAA
Misc
Kulakovskiy et al.(2009)
Dfd
0.679 0.579
Dfd
M10784_2.00
Drosophila melanogaster
NNNNRKTAATNNNNNN

NNNNNNATTAMYNNNN
Transfac
Matys et al.(2006)
I$DFD_01
0.679 0.579
HOXD4
M05274_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_1
0.679 0.579
HOXD4
M05275_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_2
0.679 0.579
HOXD4
M05277_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_1
0.679 0.579
HOXD4
M05278_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_2
0.679 0.579
Hoxa4
M00383_2.00
Mus musculus
NTAATBDNN

NNHVATTAN
PBM
Berger et al.(2008)
Hoxa4_3426
0.679 0.561
HOXA4
M05381_2.00
Homo sapiens
NTAATKRY

RYMATTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_HT-SELEX
0.679 0.561
HOXA4
M10755_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA4_Q2
0.679 0.561
HOXA4
M05382_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_Methyl-HT-SELEX
0.679 0.561
vsx2
M02079_2.00
Danio rerio
NNYTAATTARN

NYTAATTARNN
PBM
Weirauch et al.(2014)
pTH6221
0.679 0.386
VSX1
M00267_2.00
Homo sapiens
NNHAAYNNN

NNNRTTDNN
PBM
Barrera et al.(2016)
VSX1_Q175H
0.679 0.386
E5
M03814_2.00
Drosophila melanogaster
STAATKNN

NNMATTAS
SELEX
Nitta et al.(2015)
E5_1
0.678 0.491
E5
M06507_2.00
Drosophila melanogaster
BTAATKA

TMATTAV
B1H
Mathelier et al.(2014)
MA0189.1
0.678 0.491
E5
M06293_2.00
Drosophila melanogaster
NBTAATKA

TMATTAVN
B1H
Zhu et al.(2011)
E5_Cell_FBgn0008646
0.678 0.491
E5
M06294_2.00
Drosophila melanogaster
NTAATDR

YHATTAN
B1H
Zhu et al.(2011)
E5_SOLEXA_FBgn0008646
0.678 0.491
Rax
M00426_2.00
Mus musculus
NNTAATTRN

NYAATTANN
PBM
Berger et al.(2008)
Rax_3443
0.676 0.439
RAX
M03149_2.00
Homo sapiens
NHTAATTRNN

NNYAATTADN
SELEX
Jolma et al.(2013)
RAX_1
0.676 0.439
Rx
M03840_2.00
Drosophila melanogaster
BTAATTRV

BYAATTAV
SELEX
Nitta et al.(2015)
Rx_1
0.676 0.439
Rx
M03841_2.00
Drosophila melanogaster
NTAATBNSATTAN

NTAATSNVATTAN
SELEX
Nitta et al.(2015)
Rx_2
0.676 0.439
RAX
M05142_2.00
Homo sapiens
YYAATTRN

NYAATTRR
SELEX
Yin et al.(2017)
RAX_eDBD_HT-SELEX
0.676 0.439
Rx
M06520_2.00
Drosophila melanogaster
YTAATTR

YAATTAR
B1H
Mathelier et al.(2014)
MA0202.1
0.676 0.439
Rx
M06317_2.00
Drosophila melanogaster
VYTAATTR

YAATTARB
B1H
Zhu et al.(2011)
Rx_Cell_FBgn0020617
0.676 0.439
Rx
M06318_2.00
Drosophila melanogaster
HTAATTR

YAATTAD
B1H
Zhu et al.(2011)
Rx_SOLEXA_FBgn0020617
0.676 0.439
Rax
M10773_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RAX_04
0.676 0.439
RAX
M05143_2.00
Homo sapiens
NTAAYRNN

NNYRTTAN
SELEX
Yin et al.(2017)
RAX_eDBD_Methyl-HT-SELEX_1
0.676 0.439
RAX
M05144_2.00
Homo sapiens
YYAATTRN

NYAATTRR
SELEX
Yin et al.(2017)
RAX_eDBD_Methyl-HT-SELEX_2
0.676 0.439
CG4328
M06538_2.00
Drosophila melanogaster
WTWATTR

YAATWAW
B1H
Mathelier et al.(2014)
MA0182.1
0.676 0.439
CG4328
M06352_2.00
Drosophila melanogaster
NWWWATTR

YAATWWWN
B1H
Zhu et al.(2011)
CG4328_Cell_FBgn0036274
0.676 0.439
CG4328
M06353_2.00
Drosophila melanogaster
YAATWANN

NNTWATTR
B1H
Zhu et al.(2011)
CG4328_SOLEXA_FBgn0036274
0.676 0.439
ceh-5
M02179_2.00
Caenorhabditis elegans
NNTAATDDN

NHHATTANN
PBM
Weirauch et al.(2014)
pTH6562
0.674 0.509
Prrx2
M00486_2.00
Mus musculus
WRATNNN

NNNATYW
PBM
Berger et al.(2008)
Prrx2_3072
0.673 0.456
PRRX2
M03200_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
PRRX2_1
0.673 0.456
Prrx2
M03277_2.00
Mus musculus
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
Prrx2_1
0.673 0.456
PRRX2
M05262_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
PRRX2_FL_HT-SELEX
0.673 0.456
PRRX2
M05258_2.00
Homo sapiens
NTNAYGHN

NDCRTNAN
SELEX
Yin et al.(2017)
PRRX2_eDBD_HT-SELEX_1
0.673 0.456
PRRX2
M05259_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
PRRX2_eDBD_HT-SELEX_2
0.673 0.456
PRRX2
M09156_2.00
Homo sapiens
HTAATTR

YAATTAD
Misc
Kulakovskiy et al.(2013)
PRRX2_HUMAN.H11MO.0.C
0.673 0.456
Prrx2
M09207_2.00
Mus musculus
HTAATTR

YAATTAD
Misc
Kulakovskiy et al.(2013)
PRRX2_MOUSE.H11MO.0.C
0.673 0.456
PRRX2
M10735_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRRX2_05
0.673 0.456
PRRX2
M10776_2.00
Sus scrofa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRX2_Q2
0.673 0.456
Prrx2
M10767_2.00
Mus musculus
HNVHTAATTRRNHNDW

WHNDNYYAATTADBND
Transfac
Matys et al.(2006)
V$S8_01
0.673 0.456
PRRX2
M05260_2.00
Homo sapiens
NTAAYGHN

NDCRTTAN
SELEX
Yin et al.(2017)
PRRX2_eDBD_Methyl-HT-SELEX_1
0.673 0.456
PRRX2
M05261_2.00
Homo sapiens
NTAATYRN

NYRATTAN
SELEX
Yin et al.(2017)
PRRX2_eDBD_Methyl-HT-SELEX_2
0.673 0.456
PRRX2
M05263_2.00
Homo sapiens
NTAATTRR

YYAATTAN
SELEX
Yin et al.(2017)
PRRX2_FL_Methyl-HT-SELEX_1
0.673 0.456
PRRX2
M05264_2.00
Homo sapiens
HTAAYGHN

NDCRTTAD
SELEX
Yin et al.(2017)
PRRX2_FL_Methyl-HT-SELEX_2
0.673 0.456
Prrx1
M00431_2.00
Mus musculus
TAATTRNN

NNYAATTA
PBM
Berger et al.(2008)
Prrx1_3442
0.673 0.421
PRRX1
M03120_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
PRRX1_1
0.673 0.421
PRRX1
M03121_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
PRRX1_2
0.673 0.421
PRRX1
M03122_2.00
Homo sapiens
TAATTVRRTTA

TAAYYBAATTA
SELEX
Jolma et al.(2013)
PRRX1_3
0.673 0.421
Prrx1
M10770_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PMX1_01
0.673 0.421
PRRX1
M10675_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PMX1_Q6
0.673 0.421
Lhx4
M00430_2.00
Mus musculus
NYAATHN

NDATTRN
PBM
Berger et al.(2008)
Lhx4_1719
0.673 0.351
Lhx3
M00435_2.00
Mus musculus
NNNYAATHW

WDATTRNNN
PBM
Berger et al.(2008)
Lhx3_3431