CGI_10013213 (Crassostrea gigas)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 CGI_10013213 T205833_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Esx1
M00424_2.00
Mus musculus
NYTAATWR

YWATTARN
PBM
Berger et al.(2008)
Esx1_3124
0.660 0.456
ceh-54
M02188_2.00
Caenorhabditis elegans
HTAATTRVN

NBYAATTAD
PBM
Weirauch et al.(2014)
pTH5643
0.643 0.491
CaO19.4000
M02061_2.00
Candida albicans
NNDWATWRN

NYWATWHNN
PBM
Weirauch et al.(2014)
pTH5822
0.605 0.333
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC26783 Homeodomain 11 67

Links

Other Homeodomain family TFs
Other Crassostrea gigas TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACLA_007900 Aspergillus clavatus CADACLAG00000690 N 0.000
PCH_Pc16g10860 Penicillium rubens PCH_Pc16g10860 N 0.000
S40288_04526 Stachybotrys chartarum S40288_04526 N 0.000
U727_00431181161 Penicillium solitum U727_00431181161 N 0.000
Pc16g10860 Penicillium chrysogenum Pc16g10860 N 0.000