CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CGI_10015221
(
Crassostrea gigas
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
CGI_10015221
T205843_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dve
M03837_2.00
Drosophila melanogaster
VHTAATTADB
VHTAATTADB
SELEX
Nitta et al.(2015)
dve_1
0.635
0.658
dve
M03838_2.00
Drosophila melanogaster
TAATTWATKC
GMATWAATTA
SELEX
Nitta et al.(2015)
dve_2
0.635
0.658
dve
M03839_2.00
Drosophila melanogaster
YHATTATGYTAATKA
TMATTARCATAATDR
SELEX
Nitta et al.(2015)
dve_3
0.635
0.658
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EKC40241
Homeodomain
275
342
TRMRTSFDPEHEIPRLQKWFAENQHPPREVMIKYLEELNSLDSRKGRRPLDLTNIIYWFKNARAAHRR
EKC40241
Homeodomain
708
777
RKRRTRVFIDPMSEIPKLEKWFAEDTHPSSYMIDKYCEELNKSEYRQKFPKLEAKNVQLWFKNHRAKVKR
Links
Other
Homeodomain
family TFs
Other
Crassostrea gigas
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGLB008208
Biomphalaria glabrata
BGLB008208
I
0.833
Ocbimv22009013m.g
Octopus bimaculoides
Ocbimv22009013m.g
I
0.832
LotgiG173809
Lottia gigantea
LotgiG173809
I
0.830
tetur20g03290
Tetranychus urticae
tetur20g03290
I
0.672
ISCW015706
Ixodes scapularis
ISCW015706
I
0.653
PHUM502960
Pediculus humanus
PHUM502960
I
0.651
MCINX008112
Melitaea cinxia
MCINX008112
I
0.651
LDEC014136
Leptinotarsa decemlineata
LDEC014136
I
0.651
BGIBMGA002615
Bombyx mori
BGIBMGA002615
I
0.651
HMEL015950
Heliconius melpomene
HMEL015950
I
0.651
KGM_06737
Danaus plexippus
KGM_06737
I
0.651
YQE_09198
Dendroctonus ponderosae
YQE_09198
I
0.651
L798_03211
Zootermopsis nevadensis
L798_03211
I
0.651
TC001741
Tribolium castaneum
TC001741
I
0.651
SINV11333
Solenopsis invicta
SINV11333
I
0.650
Hsal_07106--XP_001606248.1_NASVI
Harpegnathos saltator
Hsal_07106--XP_001606248.1_NASVI
I
0.650
Cflo_07225--XP_001606248.1_NASVI
Camponotus floridanus
Cflo_07225--XP_001606248.1_NASVI
I
0.650
SMAR004501
Strigamia maritima
SMAR004501
I
0.650
ACEP17090
Atta cephalotes
ACEP17090
I
0.650
ACYPI009254
Acyrthosiphon pisum
ACYPI009254
I
0.647
RPRC004899
Rhodnius prolixus
RPRC004899
I
0.646
HHAL008908-PA
Halyomorpha halys
HHAL008908-PA
I
0.642
GJ15096
Drosophila virilis
FBgn0202295
I
0.638
GF12619
Drosophila ananassae
FBgn0089655
I
0.638
AFUN004267
Anopheles funestus
AFUN004267
I
0.637
AFAF019299
Anopheles farauti
AFAF019299
I
0.637
AEPI005009
Anopheles epiroticus
AEPI005009
I
0.637
ACOM039410
Anopheles coluzzii
ACOM039410
I
0.637
ACHR004661
Anopheles christyi
ACHR004661
I
0.637
ACUA026318
Anopheles culicifacies
ACUA026318
I
0.637
ADIR007339
Anopheles dirus
ADIR007339
I
0.637
AMEC015188
Anopheles melas
AMEC015188
I
0.637
LLOJ007250
Lutzomyia longipalpis
LLOJ007250
I
0.637
MDOA012801
Musca domestica
MDOA012801
I
0.637
PPAI002585
Phlebotomus papatasi
PPAI002585
I
0.637
ASIS003438
Anopheles sinensis
ASIS003438
I
0.637
AQUA004750
Anopheles quadriannulatus
AQUA004750
I
0.637
AARA008518
Anopheles arabiensis
AARA008518
I
0.637
AMEM004713
Anopheles merus
AMEM004713
I
0.637
AMIN007755
Anopheles minimus
AMIN007755
I
0.637
AMAM001922
Anopheles maculatus
AMAM001922
I
0.637
LCUP002690
Lucilia cuprina
LCUP002690
I
0.637
GH21453
Drosophila grimshawi
FBgn0128915
I
0.637
AALB004829
Anopheles albimanus
AALB004829
I
0.637
GI19929
Drosophila mojavensis
FBgn0142666
I
0.637
GL17532
Drosophila persimilis
FBgn0155135
I
0.637
GK23597
Drosophila willistoni
FBgn0225559
I
0.637
GA19138
Drosophila pseudoobscura
FBgn0079135
I
0.637
CpipJ_CPIJ005190
Culex pipiens
CpipJ_CPIJ005190
I
0.637
ADAC003119
Anopheles darlingi
ADAC003119
I
0.637
CLEC004759
Cimex lectularius
CLEC004759
I
0.637
CPIJ005190
Culex quinquefasciatus
CPIJ005190
I
0.637
GK20806
Drosophila willistoni
FBgn0222802
I
0.636
GE14170
Drosophila yakuba
FBgn0231792
I
0.635
GM15897
Drosophila sechellia
FBgn0170813
I
0.635
PHUM373730
Pediculus humanus
PHUM373730
I
0.635
NV13500
Nasonia vitripennis
NV13500
I
0.635
GG22176
Drosophila erecta
FBgn0114350
I
0.635
dve
Drosophila melanogaster
FBgn0020307
D
0.635
AATE017517
Anopheles atroparvus
AATE017517
I
0.634
DAPPUDRAFT_302916
Daphnia pulex
DAPPUDRAFT_302916
I
0.620