CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA11788
(
Caenorhabditis japonica
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
CJA11788
T205958_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ceh-54
M02188_2.00
Caenorhabditis elegans
HTAATTRVN
NBYAATTAD
PBM
Weirauch et al.(2014)
pTH5643
0.798
0.842
Esx1
M00424_2.00
Mus musculus
NYTAATWR
YWATTARN
PBM
Berger et al.(2008)
Esx1_3124
0.707
0.561
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA11788a
Homeodomain
47
103
KRNRITFDASQVDEMEKVFAENQYPDAISRDELATRIRLHEERVQIWFQNRRAKYRR
CJA11788b
Homeodomain
13
69
KRNRITFDASQVDEMEKVFAENQYPDAISRDELATRIRLHEERVQIWFQNRRAKYRR
Links
Other
Homeodomain
family TFs
Other
Caenorhabditis japonica
TFs
85 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy