CJA11788 (Caenorhabditis japonica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 CJA11788 T205958_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ceh-54
M02188_2.00 		Caenorhabditis elegans
HTAATTRVN
NBYAATTAD		 PBM
Weirauch et al.(2014)
pTH5643 		0.798 0.842
Esx1
M00424_2.00 		Mus musculus
NYTAATWR
YWATTARN		 PBM
Berger et al.(2008)
Esx1_3124 		0.707 0.561
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA11788a Homeodomain 47 103
CJA11788b Homeodomain 13 69

Links

Other Homeodomain family TFs
Other Caenorhabditis japonica TFs

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85 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action