CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cob_09008
(
Colletotrichum orbiculare
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
Cob_09008
T206026_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
kal-1
M02225_2.00
Neurospora crassa
NNNNRHNN
NNDYNNNN
PBM
Weirauch et al.(2014)
pTH8911
0.867
1.000
hbx10
M02074_2.00
Dictyostelium discoideum
NYAATWWN
NWWATTRN
PBM
Weirauch et al.(2014)
pTH5547
0.678
0.456
phx1
M02173_2.00
Schizosaccharomyces pombe
NWTTAATTANN
NNTAATTAAWN
PBM
Weirauch et al.(2014)
pTH6047
0.614
0.561
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENH82581
Homeodomain
68
124
NQKRQRATQDQLTTLEMEFNKNPTPTATVRERIAEEINMTERSVQIWFQNRRAKIKL
Links
Other
Homeodomain
family TFs
Other
Colletotrichum orbiculare
TFs
180 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy