CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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CRE02070
(
Caenorhabditis remanei
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
CRE02070
T206206_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ceh-58
M00676_2.00
Caenorhabditis elegans
NNTAATTRNN
NNYAATTANN
PBM
Narasimhan et al.(2015)
pTH9923
0.855
0.930
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE02070
Homeodomain
334
392
RRGRIVYTTHELNILEKYYEEDPNACADPKKRETMCKMLSIDYHRLKVWFQNRRRKDKV
Links
Other
Homeodomain
family TFs
Other
Caenorhabditis remanei
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ceh-58
Caenorhabditis elegans
WBGene00007417
D
0.855
CBN10640
Caenorhabditis brenneri
CBN10640
I
0.851
CBG02738
Caenorhabditis briggsae
CBG02738
I
0.846
HCOI00303400
Haemonchus contortus
HCOI00303400
I
0.611
ENSTBEG00000007985
Tupaia belangeri
ENSTBEG00000007985
I
0.600