CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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hbx5-2
(
Dictyostelium discoideum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
DDB_G0273645
T206459_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
hbx5-2
M02070_2.00
Dictyostelium discoideum
WTGATTRV
BYAATCAW
PBM
Weirauch et al.(2014)
pTH5523
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
hbx5-1
M02069_2.00
Dictyostelium discoideum
WTGATTGR
YCAATCAW
PBM
Weirauch et al.(2014)
pTH5548
0.867
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02070_2.00
Homeodomain
48
109
SRRKNRFTDFQIKRMNDCFENLDKNNNGKFTSEEICQIATELGLTDQQVRVFFQNKRARSRP
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
DDB0266662
Homeodomain
1544
1605
SRRKNRFTDFQIKRMNDCFENLDKNNNGKFTSEEICQIATELGLTDQQVRVFFQNKRARSRP
Links
Other
Homeodomain
family TFs
Other
Dictyostelium discoideum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy