CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSACAG00000012070
(
Anolis carolinensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSACAG00000012070
T206752_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN
NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.770
0.591
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN
NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.770
0.591
VSX1
M04941_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.770
0.591
VSX1
M04944_2.00
Homo sapiens
NTAATTRS
SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.770
0.591
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN
NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.770
0.591
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN
NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.770
0.591
VSX1
M04943_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.770
0.591
VSX1
M04945_2.00
Homo sapiens
NTAATTRG
CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.770
0.591
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.770
0.591
VAX1
M03168_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.735
0.386
VAX1
M05182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.735
0.386
VAX1
M05183_2.00
Homo sapiens
BTMATKRN
NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.735
0.386
PHOX2B
M00282_2.00
Homo sapiens
TAATTRRY
RYYAATTA
PBM
Barrera et al.(2016)
PHOX2B_REF
0.326
1.000
Phox2a
M00400_2.00
Mus musculus
NNHAAYNN
NNRTTDNN
PBM
Berger et al.(2008)
Phox2a_3947
0.326
1.000
Phox2b
M00401_2.00
Mus musculus
NNHAAYNN
NNRTTDNN
PBM
Berger et al.(2008)
Phox2b_3948
0.326
1.000
PHOX2A
M03194_2.00
Homo sapiens
TAATTRVRTTA
TAAYBYAATTA
SELEX
Jolma et al.(2013)
PHOX2A_1
0.326
1.000
PHOX2B
M03113_2.00
Homo sapiens
TAATTRVRTTA
TAAYBYAATTA
SELEX
Jolma et al.(2013)
PHOX2B_1
0.326
1.000
PHOX2B
M03114_2.00
Homo sapiens
TAATTRVRTTA
TAAYBYAATTA
SELEX
Jolma et al.(2013)
PHOX2B_2
0.326
1.000
PHOX2A
M05244_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
PHOX2A_eDBD_HT-SELEX
0.326
1.000
PHOX2B
M05008_2.00
Homo sapiens
BTAATYRV
BYRATTAV
SELEX
Yin et al.(2017)
PHOX2B_eDBD_HT-SELEX
0.326
1.000
PHOX2B
M05010_2.00
Homo sapiens
TAATTWRATTA
TAATYWAATTA
SELEX
Yin et al.(2017)
PHOX2B_FL_HT-SELEX
0.326
1.000
Phox2a
M09564_2.00
Mus musculus
NTAATBNRATTA
TAATYNVATTAN
Misc
Heinz et al.(2010)
Neuron-Phox2a_GSE31456
0.326
1.000
PHOX2B
M00278_2.00
Homo sapiens
NNNNNRY
RYNNNNN
PBM
Barrera et al.(2016)
PHOX2B_Q143R
0.326
1.000
PHOX2A
M05245_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
PHOX2A_eDBD_Methyl-HT-SELEX
0.326
1.000
PHOX2B
M05009_2.00
Homo sapiens
BTAATYRN
NYRATTAV
SELEX
Yin et al.(2017)
PHOX2B_eDBD_Methyl-HT-SELEX
0.326
1.000
PHOX2B
M05011_2.00
Homo sapiens
TAATTHRATTA
TAATYDAATTA
SELEX
Yin et al.(2017)
PHOX2B_FL_Methyl-HT-SELEX
0.326
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000011810
Homeodomain
26
69
RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARV
Links
Other
Homeodomain
family TFs
Other
Anolis carolinensis
TFs
1250 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy