ENSAMEG00000016410 (Ailuropoda melanoleuca)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSAMEG00000016410 T206967_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Irx2
M00386_2.00
Mus musculus
NNDACAHNN

NNDTGTHNN
PBM
Berger et al.(2008)
Irx2_0900
0.833 0.964
Irx5
M00455_2.00
Mus musculus
NNNDACAHN

NDTGTHNNN
PBM
Berger et al.(2008)
Irx5_2385
0.833 0.964
IRX2
M03212_2.00
Homo sapiens
NDACAYRACAHN

NDTGTYRTGTHN
SELEX
Jolma et al.(2013)
IRX2_1
0.833 0.964
IRX5
M03222_2.00
Homo sapiens
NDACAYRACAHN

NDTGTYRTGTHN
SELEX
Jolma et al.(2013)
IRX5_1
0.833 0.964
IRX5
M05315_2.00
Homo sapiens
NBDTGTHNDACAYVN

NBRTGTHNDACAHVN
SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX
0.833 0.964
IRX5
M05316_2.00
Homo sapiens
WYRYGHHNHAYRYRY

RYRYRTDNDDCRYRW
SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX
0.833 0.964
ara
M06518_2.00
Drosophila melanogaster
WWACA

TGTWW
B1H
Mathelier et al.(2014)
MA0210.1
0.812 0.911
ara
M06313_2.00
Drosophila melanogaster
TGTWWWNN

NNWWWACA
B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904
0.812 0.911
ara
M06314_2.00
Drosophila melanogaster
DWWACA

TGTWWH
B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904
0.812 0.911
Irx4
M00416_2.00
Mus musculus
NNNDAMAH

DTKTHNNN
PBM
Berger et al.(2008)
Irx4_2242
0.812 0.911
caup
M06519_2.00
Drosophila melanogaster
WAACA

TGTTW
B1H
Mathelier et al.(2014)
MA0217.1
0.804 0.875
caup
M06315_2.00
Drosophila melanogaster
HWDWAACA

TGTTWHWD
B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919
0.804 0.875
caup
M06316_2.00
Drosophila melanogaster
NDDACA

TGTHHN
B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919
0.804 0.875
Irx6
M00456_2.00
Mus musculus
NNDAHWN

NWDTHNN
PBM
Berger et al.(2008)
Irx6_2623
0.780 0.875
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMEP00000017327 Homeodomain 111 169

Links

Other Homeodomain family TFs
Other Ailuropoda melanoleuca TFs

389 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BRADI1G67740 Brachypodium distachyon BRADI1G67740 N 0.000
F775_07027 Aegilops tauschii F775_07027 N 0.000
GRMZM2G001663 Zea mays GRMZM2G001663 N 0.000
MLOC_51314 Hordeum vulgare MLOC_51314 N 0.000
OB03G21220 Oryza brachyantha OB03G21220 N 0.000
OGLUM03G10940 Oryza glumaepatula OGLUM03G10940 N 0.000
OLONG_007342 Oryza longistaminata OLONG_007342 N 0.000
OMERI03G10300 Oryza meridionalis OMERI03G10300 N 0.000
ONIVA03G11650 Oryza nivara ONIVA03G11650 N 0.000
OPUNC03G10640 Oryza punctata OPUNC03G10640 N 0.000
ORGLA03G0105900 Oryza glaberrima ORGLA03G0105900 N 0.000
OS03G0255400 Oryza sativa OS03G0255400 N 0.000
Pavir.Ia03883 Panicum virgatum Pavir.Ia03883 N 0.000
Sb01g040730 Sorghum bicolor Sb01g040730 N 0.000
Si034492m.g Setaria italica Si034492m.g N 0.000
Traes_4AS_636DF8B4C Triticum aestivum Traes_4AS_636DF8B4C N 0.000
Traes_4BL_DCD5FA440 Triticum aestivum Traes_4BL_DCD5FA440 N 0.000
Traes_4DL_879C8557D Triticum aestivum Traes_4DL_879C8557D N 0.000
TRIUR3_23242 Triticum urartu TRIUR3_23242 N 0.000