ENSAMEG00000017884 (Ailuropoda melanoleuca)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSAMEG00000017884 T206979_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Pitx1
M00415_2.00
Mus musculus
NTAATCYNN

NNRGATTAN
PBM
Berger et al.(2008)
Pitx1_2312
0.710 0.930
PITX1
M03082_2.00
Homo sapiens
NHTAATCCN

NGGATTADN
SELEX
Jolma et al.(2013)
PITX1_1
0.710 0.930
PITX1
M03083_2.00
Homo sapiens
NHTAATCCN

NGGATTADN
SELEX
Jolma et al.(2013)
PITX1_2
0.710 0.930
PITX1
M03084_2.00
Homo sapiens
HTAATCCN

NGGATTAD
SELEX
Jolma et al.(2013)
PITX1_3
0.710 0.930
PITX1
M04928_2.00
Homo sapiens
NTAATCCN

NGGATTAN
SELEX
Yin et al.(2017)
PITX1_eDBD_HT-SELEX
0.710 0.930
PITX1
M04930_2.00
Homo sapiens
NTAATCCN

NGGATTAN
SELEX
Yin et al.(2017)
PITX1_FL_HT-SELEX
0.710 0.930
Pitx1
M09182_2.00
Mus musculus
NYWAAKCCYH

DRGGMTTWRN
Misc
Kulakovskiy et al.(2013)
PITX1_MOUSE.H11MO.0.C
0.710 0.930
PITX1
M10640_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX1_Q4
0.710 0.930
PITX1
M10641_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX1_Q6
0.710 0.930
PITX1
M04929_2.00
Homo sapiens
NTAAKCCN

NGGMTTAN
SELEX
Yin et al.(2017)
PITX1_eDBD_Methyl-HT-SELEX
0.710 0.930
PITX1
M04931_2.00
Homo sapiens
HTAATCCN

NGGATTAD
SELEX
Yin et al.(2017)
PITX1_FL_Methyl-HT-SELEX
0.710 0.930
PITX2
M00313_2.00
Homo sapiens
NWAAKHYN

NRDMTTWN
PBM
Barrera et al.(2016)
PITX2_REF
0.710 0.895
Pitx3
M00428_2.00
Mus musculus
NTAAKCYN

NRGMTTAN
PBM
Berger et al.(2008)
Pitx3_3497
0.710 0.895
Pitx2
M00440_2.00
Mus musculus
NTAATCCN

NGGATTAN
PBM
Berger et al.(2008)
Pitx2_2274
0.710 0.895
PITX3
M03111_2.00
Homo sapiens
NHTAATCCN

NGGATTADN
SELEX
Jolma et al.(2013)
PITX3_1
0.710 0.895
PITX2
M05229_2.00
Homo sapiens
NTAAKCCN

NGGMTTAN
SELEX
Yin et al.(2017)
PITX2_eDBD_HT-SELEX
0.710 0.895
PITX2
M05231_2.00
Homo sapiens
NTAATCCN

NGGATTAN
SELEX
Yin et al.(2017)
PITX2_FL_HT-SELEX
0.710 0.895
PITX3
M04997_2.00
Homo sapiens
NTAATCCN

NGGATTAN
SELEX
Yin et al.(2017)
PITX3_eDBD_HT-SELEX
0.710 0.895
PITX2
M10720_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX2_Q2
0.710 0.895
PITX2
M10721_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX2_Q4
0.710 0.895
PITX2
M10722_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX2_Q6
0.710 0.895
PITX3
M10660_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX3_Q2
0.710 0.895
PITX3
M10661_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX3_Q3_01
0.710 0.895
PITX3
M10662_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX3_Q3
0.710 0.895
PITX2
M00314_2.00
Homo sapiens
NTAATMYN

NRKATTAN
PBM
Barrera et al.(2016)
PITX2_T114P
0.710 0.895
PITX2
M05230_2.00
Homo sapiens
HTAATCCN

NGGATTAD
SELEX
Yin et al.(2017)
PITX2_eDBD_Methyl-HT-SELEX
0.710 0.895
PITX2
M05232_2.00
Homo sapiens
YTAATCCY

RGGATTAR
SELEX
Yin et al.(2017)
PITX2_FL_Methyl-HT-SELEX
0.710 0.895
PITX3
M04998_2.00
Homo sapiens
NTAATCCN

NGGATTAN
SELEX
Yin et al.(2017)
PITX3_eDBD_Methyl-HT-SELEX
0.710 0.895
PITX2
M00310_2.00
Homo sapiens
HTAATCYN

NRGATTAD
PBM
Barrera et al.(2016)
PITX2_L100Q
0.710 0.877
Ptx1
M02123_2.00
Drosophila melanogaster
NTAATCYNN

NNRGATTAN
PBM
Weirauch et al.(2014)
pTH5644
0.709 0.842
Ptx1
M00562_2.00
Drosophila melanogaster
NYTAATCCBN

NVGGATTARN
PBM
Busser et al.(2012a)
Ptx1
0.709 0.842
Ptx1
M03842_2.00
Drosophila melanogaster
NTAATCCN

NGGATTAN
SELEX
Nitta et al.(2015)
Ptx1_1
0.709 0.842
Ptx1
M03843_2.00
Drosophila melanogaster
NTAATCCN

NGGATTAN
SELEX
Nitta et al.(2015)
Ptx1_2
0.709 0.842
Ptx1
M03844_2.00
Drosophila melanogaster
NCGHTAATCCN

NGGATTADCGN
SELEX
Nitta et al.(2015)
Ptx1_3
0.709 0.842
Ptx1
M06521_2.00
Drosophila melanogaster
YTAATCC

GGATTAR
B1H
Mathelier et al.(2014)
MA0201.1
0.709 0.842
Ptx1
M06319_2.00
Drosophila melanogaster
YTAATCC

GGATTAR
B1H
Zhu et al.(2011)
Ptx1_Cell_FBgn0020912
0.709 0.842
Ptx1
M06320_2.00
Drosophila melanogaster
NYTAATCC

GGATTARN
B1H
Zhu et al.(2011)
Ptx1_SOLEXA_FBgn0020912
0.709 0.842
PITX2
M00311_2.00
Homo sapiens
TTAATCCY

RGGATTAA
PBM
Barrera et al.(2016)
PITX2_R108H
0.705 0.877
CBG01820
M01241_2.00
Caenorhabditis briggsae
NTAATCCN

NGGATTAN
PBM
Lambert et al.(2019)
pTH11454
0.699 0.772
PITX2
M00312_2.00
Homo sapiens
NNNTATWAATTNN

NNAATTWATANNN
PBM
Barrera et al.(2016)
PITX2_R130W
0.676 0.877
Gsc
M02120_2.00
Drosophila melanogaster
NTAATCYN

NRGATTAN
PBM
Weirauch et al.(2014)
pTH5511
0.614 0.561
Gsc
M03817_2.00
Drosophila melanogaster
TAATCCB

VGGATTA
SELEX
Nitta et al.(2015)
Gsc_1
0.614 0.561
Gsc
M03818_2.00
Drosophila melanogaster
TAATCGGATTA

TAATCCGATTA
SELEX
Nitta et al.(2015)
Gsc_2
0.614 0.561
Gsc
M03819_2.00
Drosophila melanogaster
TAATCYNHTAATCBN

NVGATTADNRGATTA
SELEX
Nitta et al.(2015)
Gsc_3
0.614 0.561
Gsc
M03820_2.00
Drosophila melanogaster
TAATCGGATTA

TAATCCGATTA
SELEX
Nitta et al.(2015)
Gsc_4
0.614 0.561
Gsc
M03821_2.00
Drosophila melanogaster
TAATCYNWTWATCYB

VRGATWAWNRGATTA
SELEX
Nitta et al.(2015)
Gsc_5
0.614 0.561
Gsc
M05873_2.00
Drosophila melanogaster
TAATCSNHTWA

TWADNSGATTA
SMiLE-seq
Isakova et al.(2017)
Gsc
0.614 0.561
Gsc
M06509_2.00
Drosophila melanogaster
TAATCY

RGATTA
B1H
Mathelier et al.(2014)
MA0190.1
0.614 0.561
Gsc
M06297_2.00
Drosophila melanogaster
VNTAATCY

RGATTANB
B1H
Zhu et al.(2011)
Gsc_Cell_FBgn0010323
0.614 0.561
Gsc
M06298_2.00
Drosophila melanogaster
NTAATCY

RGATTAN
B1H
Zhu et al.(2011)
Gsc_SOLEXA_FBgn0010323
0.614 0.561
CRX
M00271_2.00
Homo sapiens
NHDAKNN

NNMTHDN
PBM
Barrera et al.(2016)
CRX_R41Q
0.610 0.579
Dmbx1
M00441_2.00
Mus musculus
NTAATCYNN

NNRGATTAN
PBM
Berger et al.(2008)
Dmbx1_2277
0.607 0.614
DMBX1
M03236_2.00
Homo sapiens
NHTAATCCBN

NVGGATTADN
SELEX
Jolma et al.(2013)
DMBX1_1
0.607 0.614
DMBX1
M05383_2.00
Homo sapiens
NTAATCSN

NSGATTAN
SELEX
Yin et al.(2017)
DMBX1_eDBD_HT-SELEX
0.607 0.614
DMBX1
M05384_2.00
Homo sapiens
HTAATCCN

NGGATTAD
SELEX
Yin et al.(2017)
DMBX1_eDBD_Methyl-HT-SELEX
0.607 0.614
ceh-53
M00679_2.00
Caenorhabditis elegans
HTAATCYN

NRGATTAD
PBM
Narasimhan et al.(2015)
pTH10699
0.602 0.474
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMEP00000018893 Homeodomain 70 127

Links

Other Homeodomain family TFs
Other Ailuropoda melanoleuca TFs

490 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PDK_20s1318001g001 Phoenix dactylifera PDK_20s1318001g001 N 0.000
Cagra.2774s0002 Capsella grandiflora Cagra.2774s0002 N 0.000
Bostr.19424s0154 Boechera stricta Bostr.19424s0154 N 0.000
Aquca_108_00003 Aquilegia coerulea Aquca_108_00003 N 0.000
mgf023017m Mimulus guttatus mgf023017m N 0.000
Cucsa.078480 Cucumis sativus Cucsa.078480 N 0.000
cassava34238.m1 Manihot esculenta cassava34238.m1 N 0.000
cassava2971.m1 Manihot esculenta cassava2971.m1 N 0.000
30204.m001803 Ricinus communis 30204.m001803 N 0.000
Pm020417 Prunus mume Pm020417 N 0.000
Cla015213 Citrullus lanatus Cla015213 N 0.000
Ca_21518 Cicer arietinum Ca_21518 N 0.000
ABI3 Vitis vinifera VIT_07s0005g05400 N 0.000
TRIUR3_22986 Triticum urartu TRIUR3_22986 N 0.000
TCM_003056 Theobroma cacao TCM_003056 N 0.000
Carubv10016094m.g Capsella rubella Carubv10016094m.g N 0.000
Ciclev10019039m.g Citrus clementina Ciclev10019039m.g N 0.000
chr1.CM0147.220.nd Lotus japonicus chr1.CM0147.220.nd N 0.000
Thhalv10003110m.g Eutrema salsugineum Thhalv10003110m.g N 0.000
SapurV1A.0937s0080 Salix purpurea SapurV1A.0937s0080 N 0.000
Pavir.J03563 Panicum virgatum Pavir.J03563 N 0.000
Pavir.Ea03476 Panicum virgatum Pavir.Ea03476 N 0.000
orange1.1g038867m.g Citrus sinensis orange1.1g038867m.g N 0.000
MDP0000309680 Malus domestica MDP0000309680 N 0.000
MDP0000166580 Malus domestica MDP0000166580 N 0.000
Lus10022820.g Linum usitatissimum Lus10022820.g N 0.000
Lus10011888.g Linum usitatissimum Lus10011888.g N 0.000
Gorai.001G184300 Gossypium raimondii Gorai.001G184300 N 0.000
gene17562-v1.0-hybrid Fragaria vesca gene17562-v1.0-hybrid N 0.000
evm.TU.supercontig_8.187 Carica papaya evm.TU.supercontig_8.187 N 0.000
Eucgr.H00815 Eucalyptus grandis Eucgr.H00815 N 0.000
Solyc06g083600.1 Solanum lycopersicum Solyc06g083600.1 N 0.000
Solyc06g083590.2 Solanum lycopersicum Solyc06g083590.2 N 0.000
MLOC_69727 Hordeum vulgare MLOC_69727 N 0.000
LPERR01G35880 Leersia perrieri LPERR01G35880 N 0.000
GSMUA_AchrUn_randomG18520_001 Musa acuminata GSMUA_AchrUn_randomG18520_001 N 0.000
GSMUA_Achr7G23040_001 Musa acuminata GSMUA_Achr7G23040_001 N 0.000
GRMZM2G133398 Zea mays GRMZM2G133398 N 0.000
GLYMA18G38490 Glycine max GLYMA18G38490 N 0.000
GLYMA08G47240 Glycine max GLYMA08G47240 N 0.000
ABI3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3002399 N 0.000
F775_43744 Aegilops tauschii F775_43744 N 0.000
BRADI2G58390 Brachypodium distachyon BRADI2G58390 N 0.000
Bra013248 Brassica rapa Bra013248 N 0.000
Bo3g083650 Brassica oleracea Bo3g083650 N 0.000
BGIOSGA000276 Oryza indica BGIOSGA000276 N 0.000
ABI3 Arabidopsis thaliana AT3G24650 N 0.000
MTR_7g059330 Medicago truncatula MTR_7g059330 N 0.000
OB01G50120 Oryza brachyantha OB01G50120 N 0.000
Si000497m.g Setaria italica Si000497m.g N 0.000
Sb03g043480 Sorghum bicolor Sb03g043480 N 0.000
PRUPE_ppa001608mg Prunus persica PRUPE_ppa001608mg N 0.000
POPTR_0002s25330 Populus trichocarpa POPTR_0002s25330 N 0.000
PGSC0003DMG400020155 Solanum tuberosum PGSC0003DMG400020155 N 0.000
PGSC0003DMG400020088 Solanum tuberosum PGSC0003DMG400020088 N 0.000
VP1 Oryza sativa OS01G0911700 N 0.000
ORUFI01G44750 Oryza rufipogon ORUFI01G44750 N 0.000
ORGLA01G0353400 Oryza glaberrima ORGLA01G0353400 N 0.000
ONIVA01G46510 Oryza nivara ONIVA01G46510 N 0.000
OMERI01G38380 Oryza meridionalis OMERI01G38380 N 0.000
OLONG_001180 Oryza longistaminata OLONG_001180 N 0.000
OGLUM01G45580 Oryza glumaepatula OGLUM01G45580 N 0.000
OBART01G41410 Oryza barthii OBART01G41410 N 0.000
AMTR_s00049p00034730 Amborella trichopoda AMTR_s00049p00034730 N 0.000