ENSAMXG00000005199 (Astyanax mexicanus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSAMXG00000005199 T207040_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hoxa9
M00475_2.00
Mus musculus
NNDDBNNN

NNNVHHNN
PBM
Berger et al.(2008)
Hoxa9_2622
0.817 0.965
HOXA9
M03085_2.00
Homo sapiens
NNDTTWAYGAYN

NRTCRTWAAHNN
SELEX
Jolma et al.(2013)
HOXA10_1
0.817 0.965
HOXA9
M03086_2.00
Homo sapiens
NDTTWATKRYN

NRYMATWAAHN
SELEX
Jolma et al.(2013)
HOXA10_2
0.817 0.965
HOXA9
M04932_2.00
Homo sapiens
NNDWWABKRC

GYMVTWWHNN
SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_1
0.817 0.965
HOXA9
M04933_2.00
Homo sapiens
NNDTWAYGRB

VYCRTWAHNN
SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_2
0.817 0.965
Hoxa9
M08138_2.00
Mus musculus
TGATTKATKRB

VYMATMAATCA
ChIP-seq
Mathelier et al.(2014)
MA0594.1
0.817 0.965
HOXA9
M09130_2.00
Homo sapiens
DCATAAAYYRBH

DVYRRTTTATGH
Misc
Kulakovskiy et al.(2013)
HXA10_HUMAN.H11MO.0.C
0.817 0.965
HOXA9
M09131_2.00
Homo sapiens
HHATAAATCAH

DTGATTTATDD
Misc
Kulakovskiy et al.(2013)
HXA9_HUMAN.H11MO.0.B
0.817 0.965
Hoxa9
M09203_2.00
Mus musculus
HHATAAATCAH

DTGATTTATDD
Misc
Kulakovskiy et al.(2013)
HXA9_MOUSE.H11MO.0.B
0.817 0.965
Hoxa9
M09575_2.00
Mus musculus
WGATTKATDRBY

RVYHATMAATCW
Misc
Heinz et al.(2010)
HSC-Hoxa9_GSE33509
0.817 0.965
HOXA9
M10642_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA10_Q6
0.817 0.965
HOXA9
M10643_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA9_04
0.817 0.965
HOXA9
M10644_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA9_Q5_01
0.817 0.965
HOXA9
M10645_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA9_Q5
0.817 0.965
HOXA9
M04934_2.00
Homo sapiens
NNDTWAYKRC

GYMRTWAHNN
SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_1
0.817 0.965
HOXA9
M04935_2.00
Homo sapiens
NNDTWACGAY

RTCGTWAHNN
SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_2
0.817 0.965
Hoxb9
M00410_2.00
Mus musculus
NTTWAYDDNN

NNHHRTWAAN
PBM
Berger et al.(2008)
Hoxb9_3413
0.817 0.912
HOXB9
M05289_2.00
Homo sapiens
RTCRTAAAWN

NWTTTAYGAY
SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_1
0.817 0.912
HOXB9
M05290_2.00
Homo sapiens
NTTTWATKRC

GYMATWAAAN
SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_2
0.817 0.912
HOXB9
M05291_2.00
Homo sapiens
GTCGTAAAHB

VDTTTACGAC
SELEX
Yin et al.(2017)
HOXB9_eDBD_Methyl-HT-SELEX
0.817 0.912
Hoxd9
M03282_2.00
Mus musculus
TTTWATKKB

VMMATWAAA
SELEX
Jolma et al.(2013)
Hoxd9_1
0.805 0.930
Hoxd9
M03283_2.00
Mus musculus
DWTTWATKRY

RYMATWAAWH
SELEX
Jolma et al.(2013)
Hoxd9_2
0.805 0.930
Hoxd9
M03284_2.00
Mus musculus
DTTWAYGRB

VYCRTWAAH
SELEX
Jolma et al.(2013)
Hoxd9_3
0.805 0.930
HOXC9
M05331_2.00
Homo sapiens
GTCGTAAAAN

NTTTTACGAC
SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_1
0.805 0.930
HOXC9
M05332_2.00
Homo sapiens
NTTTTATKRC

GYMATAAAAN
SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_2
0.805 0.930
HOXD9
M05104_2.00
Homo sapiens
NTTTTATKRC

GYMATAAAAN
SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_1
0.805 0.930
HOXD9
M05105_2.00
Homo sapiens
RTCRTAAAWN

NWTTTAYGAY
SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_2
0.805 0.930
HOXD9
M05108_2.00
Homo sapiens
RTCGTAAAWN

NWTTTACGAY
SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_1
0.805 0.930
HOXD9
M05109_2.00
Homo sapiens
NTTTTATKRC

GYMATAAAAN
SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_2
0.805 0.930
HOXC9
M09161_2.00
Homo sapiens
HTTWATKGCH

DGCMATWAAD
Misc
Kulakovskiy et al.(2013)
HXC9_HUMAN.H11MO.0.C
0.805 0.930
HOXD9
M10686_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXD9_Q2
0.805 0.930
HOXC9
M05333_2.00
Homo sapiens
RTCGTAAAHN

NDTTTACGAY
SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_1
0.805 0.930
HOXC9
M05334_2.00
Homo sapiens
NTTTWATKRC

GYMATWAAAN
SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_2
0.805 0.930
HOXD9
M05106_2.00
Homo sapiens
NNTTWATKRC

GYMATWAANN
SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_1
0.805 0.930
HOXD9
M05107_2.00
Homo sapiens
RTCGTAAANN

NNTTTACGAY
SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_2
0.805 0.930
HOXD9
M05110_2.00
Homo sapiens
RTCGTAAANN

NNTTTACGAY
SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_1
0.805 0.930
HOXD9
M05111_2.00
Homo sapiens
NDTTWATKRC

GYMATWAAHN
SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_2
0.805 0.930
Hoxc9
M00470_2.00
Mus musculus
NGTAATWAAN

NTTWATTACN
PBM
Berger et al.(2008)
Hoxc9_2367
0.797 0.912
Hoxc9
M08137_2.00
Mus musculus
NWGATTTATDGSH

DSCHATAAATCWN
ChIP-seq
Mathelier et al.(2014)
MA0485.1
0.797 0.912
Hoxc9
M09574_2.00
Mus musculus
TGATTTATDGCH

DGCHATAAATCA
Misc
Heinz et al.(2010)
Ainv15-Hoxc9_GSE21812
0.797 0.912
Hoxd11
M00493_2.00
Mus musculus
DDDNNNNN

NNNNNHHH
PBM
Berger et al.(2008)
Hoxd11_3873
0.795 0.702
HOXD11
M03139_2.00
Homo sapiens
RTCGTAAAWH

DWTTTACGAY
SELEX
Jolma et al.(2013)
HOXD11_1
0.795 0.702
HOXD11
M03140_2.00
Homo sapiens
TTTWATKRBH

DVYMATWAAA
SELEX
Jolma et al.(2013)
HOXD11_2
0.795 0.702
HOXD11
M05120_2.00
Homo sapiens
NRTCGTWAANNDTWAH

DTWAHNNTTWACGAYN
SELEX
Yin et al.(2017)
HOXD11_eDBD_HT-SELEX
0.795 0.702
HOXD11
M05121_2.00
Homo sapiens
NRTCGTWAAHNDTWAH

DTWAHNDTTWACGAYN
SELEX
Yin et al.(2017)
HOXD11_eDBD_Methyl-HT-SELEX
0.795 0.702
Hoxc11
M00390_2.00
Mus musculus
NTTWAYDDBN

NVHHRTWAAN
PBM
Berger et al.(2008)
Hoxc11_3718
0.795 0.684
Hoxa11
M00474_2.00
Mus musculus
NNHNHNNNN

NNNNDNDNN
PBM
Berger et al.(2008)
Hoxa11_2218
0.795 0.684
HOXC11
M03131_2.00
Homo sapiens
NWTTWAYGAYH

DRTCRTWAAWN
SELEX
Jolma et al.(2013)
HOXC11_1
0.795 0.684
HOXC11
M03132_2.00
Homo sapiens
NWTTWATKRBH

DVYMATWAAWN
SELEX
Jolma et al.(2013)
HOXC11_2
0.795 0.684
HOXC11
M03133_2.00
Homo sapiens
DRTCGTWAAWN

NWTTWACGAYH
SELEX
Jolma et al.(2013)
HOXC11_3
0.795 0.684
HOXC11
M03134_2.00
Homo sapiens
NTTTTATKRBN

NVYMATAAAAN
SELEX
Jolma et al.(2013)
HOXC11_4
0.795 0.684
Hoxa11
M03274_2.00
Mus musculus
NNDTTWAYGABN

NVTCRTWAAHNN
SELEX
Jolma et al.(2013)
Hoxa11_1
0.795 0.684
Hoxa11
M03275_2.00
Mus musculus
NDTTWATKRNN

NNYMATWAAHN
SELEX
Jolma et al.(2013)
Hoxa11_2
0.795 0.684
HOXA11
M04897_2.00
Homo sapiens
VGTCGTAAAWH

DWTTTACGACB
SELEX
Yin et al.(2017)
HOXA11_eDBD_HT-SELEX_1
0.795 0.684
HOXA11
M04898_2.00
Homo sapiens
DDTTWATKRSN

NSYMATWAAHH
SELEX
Yin et al.(2017)
HOXA11_eDBD_HT-SELEX_2
0.795 0.684
HOXC11
M05075_2.00
Homo sapiens
NDTTWACGAYN

NRTCGTWAAHN
SELEX
Yin et al.(2017)
HOXC11_eDBD_HT-SELEX_1
0.795 0.684
HOXC11
M05076_2.00
Homo sapiens
NWTTWATKRCH

DGYMATWAAWN
SELEX
Yin et al.(2017)
HOXC11_eDBD_HT-SELEX_2
0.795 0.684
HOXC11
M05079_2.00
Homo sapiens
NRTCGTWAAHN

NDTTWACGAYN
SELEX
Yin et al.(2017)
HOXC11_FL_HT-SELEX_1
0.795 0.684
HOXC11
M05080_2.00
Homo sapiens
NDTTWATKRSN

NSYMATWAAHN
SELEX
Yin et al.(2017)
HOXC11_FL_HT-SELEX_2
0.795 0.684
HOXA11
M04899_2.00
Homo sapiens
NRTCGTAAAWH

DWTTTACGAYN
SELEX
Yin et al.(2017)
HOXA11_eDBD_Methyl-HT-SELEX_1
0.795 0.684
HOXA11
M04900_2.00
Homo sapiens
DYTTTATKRCH

DGYMATAAARH
SELEX
Yin et al.(2017)
HOXA11_eDBD_Methyl-HT-SELEX_2
0.795 0.684
HOXC11
M05077_2.00
Homo sapiens
NRTCGTAAAHN

NDTTTACGAYN
SELEX
Yin et al.(2017)
HOXC11_eDBD_Methyl-HT-SELEX_1
0.795 0.684
HOXC11
M05078_2.00
Homo sapiens
NDTTTATKRSN

NSYMATAAAHN
SELEX
Yin et al.(2017)
HOXC11_eDBD_Methyl-HT-SELEX_2
0.795 0.684
HOXC11
M05081_2.00
Homo sapiens
NRTCGTWAANN

NNTTWACGAYN
SELEX
Yin et al.(2017)
HOXC11_FL_Methyl-HT-SELEX_1
0.795 0.684
HOXC11
M05082_2.00
Homo sapiens
NNTTWAYKRSN

NSYMRTWAANN
SELEX
Yin et al.(2017)
HOXC11_FL_Methyl-HT-SELEX_2
0.795 0.684
Hoxc10
M00421_2.00
Mus musculus
TTWATKAB

VTMATWAA
PBM
Berger et al.(2008)
Hoxc10_2779
0.756 0.807
Hoxd10
M00509_2.00
Mus musculus
NNNNNNNN

NNNNNNNN
PBM
Berger et al.(2008)
Hoxd10_2368
0.756 0.807
HOXC10
M03228_2.00
Homo sapiens
DTTTWATKDB

VHMATWAAAH
SELEX
Jolma et al.(2013)
HOXC10_1
0.756 0.807
HOXC10
M03229_2.00
Homo sapiens
NNTTWATKRB

VYMATWAANN
SELEX
Jolma et al.(2013)
HOXC10_2
0.756 0.807
HOXC10
M03230_2.00
Homo sapiens
NWTTWAYGAB

VTCRTWAAWN
SELEX
Jolma et al.(2013)
HOXC10_3
0.756 0.807
Hoxc10
M03252_2.00
Mus musculus
DTTTWAYGAY

RTCRTWAAAH
SELEX
Jolma et al.(2013)
Hoxc10_1
0.756 0.807
Hoxc10
M03253_2.00
Mus musculus
DTTTWATKRY

RYMATWAAAH
SELEX
Jolma et al.(2013)
Hoxc10_2
0.756 0.807
HOXC10
M05335_2.00
Homo sapiens
NDTTTATKRCN

NGYMATAAAHN
SELEX
Yin et al.(2017)
HOXC10_eDBD_HT-SELEX_1
0.756 0.807
HOXC10
M05336_2.00
Homo sapiens
NRTCGTAAAHN

NDTTTACGAYN
SELEX
Yin et al.(2017)
HOXC10_eDBD_HT-SELEX_2
0.756 0.807
HOXC10
M05339_2.00
Homo sapiens
NTTTTATKRCN

NGYMATAAAAN
SELEX
Yin et al.(2017)
HOXC10_FL_HT-SELEX_1
0.756 0.807
HOXC10
M05340_2.00
Homo sapiens
NRTCGTAAAWN

NWTTTACGAYN
SELEX
Yin et al.(2017)
HOXC10_FL_HT-SELEX_2
0.756 0.807
HOXD10
M05112_2.00
Homo sapiens
NKTTTATKRC

GYMATAAAMN
SELEX
Yin et al.(2017)
HOXD10_eDBD_HT-SELEX_1
0.756 0.807
HOXD10
M05113_2.00
Homo sapiens
RTCGTAAAHN

NDTTTACGAY
SELEX
Yin et al.(2017)
HOXD10_eDBD_HT-SELEX_2
0.756 0.807
HOXD10
M05116_2.00
Homo sapiens
RGTCGTAAAAH

DTTTTACGACY
SELEX
Yin et al.(2017)
HOXD10_FL_HT-SELEX_1
0.756 0.807
HOXD10
M05117_2.00
Homo sapiens
RRYMATAAAAH

DTTTTATKRYY
SELEX
Yin et al.(2017)
HOXD10_FL_HT-SELEX_2
0.756 0.807
HOXD10
M10687_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXD10_Q2
0.756 0.807
HOXD10
M10688_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXD10_Q6
0.756 0.807
HOXC10
M05337_2.00
Homo sapiens
NTTTTATKRCN

NGYMATAAAAN
SELEX
Yin et al.(2017)
HOXC10_eDBD_Methyl-HT-SELEX_1
0.756 0.807
HOXC10
M05338_2.00
Homo sapiens
NRTCGTAAAHN

NDTTTACGAYN
SELEX
Yin et al.(2017)
HOXC10_eDBD_Methyl-HT-SELEX_2
0.756 0.807
HOXC10
M05341_2.00
Homo sapiens
DTTTTATKRCH

DGYMATAAAAH
SELEX
Yin et al.(2017)
HOXC10_FL_Methyl-HT-SELEX_1
0.756 0.807
HOXC10
M05342_2.00
Homo sapiens
VGTCGTAAAHN

NDTTTACGACB
SELEX
Yin et al.(2017)
HOXC10_FL_Methyl-HT-SELEX_2
0.756 0.807
HOXD10
M05114_2.00
Homo sapiens
NTTTTATKRC

GYMATAAAAN
SELEX
Yin et al.(2017)
HOXD10_eDBD_Methyl-HT-SELEX_1
0.756 0.807
HOXD10
M05115_2.00
Homo sapiens
GTCGTAAAHN

NDTTTACGAC
SELEX
Yin et al.(2017)
HOXD10_eDBD_Methyl-HT-SELEX_2
0.756 0.807
HOXD10
M05118_2.00
Homo sapiens
VGTCGTAAAAH

DTTTTACGACB
SELEX
Yin et al.(2017)
HOXD10_FL_Methyl-HT-SELEX_1
0.756 0.807
HOXD10
M05119_2.00
Homo sapiens
DGYAATAAAAH

DTTTTATTRCH
SELEX
Yin et al.(2017)
HOXD10_FL_Methyl-HT-SELEX_2
0.756 0.807
Hoxa10
M00382_2.00
Mus musculus
NHWAYNNNN

NNNNRTWDN
PBM
Berger et al.(2008)
Hoxa10_2318
0.754 0.807
HOXA10
M05394_2.00
Homo sapiens
RRTCGTAAAAH

DTTTTACGAYY
SELEX
Yin et al.(2017)
HOXA10_eDBD_HT-SELEX_1
0.754 0.807
HOXA10
M05395_2.00
Homo sapiens
NTTTTATKRCY

RGYMATAAAAN
SELEX
Yin et al.(2017)
HOXA10_eDBD_HT-SELEX_2
0.754 0.807
HOXA10
M05398_2.00
Homo sapiens
NRTCRTWAANN

NNTTWAYGAYN
SELEX
Yin et al.(2017)
HOXA10_FL_HT-SELEX_1
0.754 0.807
HOXA10
M05399_2.00
Homo sapiens
NNTTWATKRCN

NGYMATWAANN
SELEX
Yin et al.(2017)
HOXA10_FL_HT-SELEX_2
0.754 0.807
Hoxa10
M09170_2.00
Mus musculus
DCATAAAYYRBH

DVYRRTTTATGH
Misc
Kulakovskiy et al.(2013)
HXA10_MOUSE.H11MO.0.C
0.754 0.807
Hoxa10
M10763_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA10_Q5
0.754 0.807
HOXA10
M05396_2.00
Homo sapiens
NGTCGTAAAWN

NWTTTACGACN
SELEX
Yin et al.(2017)
HOXA10_eDBD_Methyl-HT-SELEX_1
0.754 0.807
HOXA10
M05397_2.00
Homo sapiens
NTTTTATKRCB

VGYMATAAAAN
SELEX
Yin et al.(2017)
HOXA10_eDBD_Methyl-HT-SELEX_2
0.754 0.807
HOXA10
M05400_2.00
Homo sapiens
NRTCGTWAANN

NNTTWACGAYN
SELEX
Yin et al.(2017)
HOXA10_FL_Methyl-HT-SELEX_1
0.754 0.807
HOXA10
M05401_2.00
Homo sapiens
NNTTWATKRYN

NRYMATWAANN
SELEX
Yin et al.(2017)
HOXA10_FL_Methyl-HT-SELEX_2
0.754 0.807
Hoxd12_CONSTRUCT
M00538_2.00
PBM CONSTRUCTS
NWTWAYNDBN

NVHNRTWAWN
PBM
Berger et al.(2008)
Hoxd12_3481
0.634 0.632
HOXD12
M03206_2.00
Homo sapiens
SYAATAAAA

TTTTATTRS
SELEX
Jolma et al.(2013)
HOXD12_1
0.634 0.632
HOXD12
M03207_2.00
Homo sapiens
RVTCGTAAAAH

DTTTTACGABY
SELEX
Jolma et al.(2013)
HOXD12_2
0.634 0.632
HOXD12
M03208_2.00
Homo sapiens
NRTCGTAAAHN

NDTTTACGAYN
SELEX
Jolma et al.(2013)
HOXD12_3
0.634 0.632
HOXD12
M03209_2.00
Homo sapiens
DTTWATYRC

GYRATWAAH
SELEX
Jolma et al.(2013)
HOXD12_4
0.634 0.632
HOXD12
M05279_2.00
Homo sapiens
NKTWACGAYN

NRTCGTWAMN
SELEX
Yin et al.(2017)
HOXD12_eDBD_HT-SELEX
0.634 0.632
HOXD12
M05280_2.00
Homo sapiens
NRTCGTAAAH

DTTTACGAYN
SELEX
Yin et al.(2017)
HOXD12_eDBD_Methyl-HT-SELEX
0.634 0.632
Abd-B
M00554_2.00
Drosophila melanogaster
NWTWAYDDNN

NNHHRTWAWN
PBM
Busser et al.(2012a)
Abd-B
0.634 0.737
Abd-B
M03772_2.00
Drosophila melanogaster
DRTCRTAAAWH

DWTTTAYGAYH
SELEX
Nitta et al.(2015)
Abd-B_1
0.634 0.737
Abd-B
M03773_2.00
Drosophila melanogaster
DTTTTATKRCY

RGYMATAAAAH
SELEX
Nitta et al.(2015)
Abd-B_2
0.634 0.737
Abd-B
M03774_2.00
Drosophila melanogaster
NKCARYAACGACYW

WRGTCGTTRYTGMN
SELEX
Nitta et al.(2015)
Abd-B_3
0.634 0.737
Abd-B
M03775_2.00
Drosophila melanogaster
DTTTWATGKSTTTY

RAAASMCATWAAAH
SELEX
Nitta et al.(2015)
Abd-B_4
0.634 0.737
Abd-B
M06476_2.00
Drosophila melanogaster
TTTATKR

YMATAAA
B1H
Mathelier et al.(2014)
MA0165.1
0.634 0.737
Abd-B
M06211_2.00
Drosophila melanogaster
YCATAAAA

TTTTATGR
B1H
Zhu et al.(2011)
Abd-B_FlyReg_FBgn0000015
0.634 0.737
Abd-B
M09672_2.00
Drosophila melanogaster
YMATAAAAHH

DDTTTTATKR
Misc
Kulakovskiy et al.(2009)
Abd-B
0.634 0.737
Abd-B
M10779_2.00
Drosophila melanogaster
VSNTTDATKRCNNN

NNNGYMATHAANSB
Transfac
Matys et al.(2006)
I$ABDB_01
0.634 0.737
Abd-B
M10780_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$ABDB_Q6
0.634 0.737
Q24782_9CNID
M02206_2.00
Eleutheria dichotoma
TTAATTAA

TTAATTAA
PBM
Weirauch et al.(2014)
pTH5486
0.624 0.667
MEOX2
M03103_2.00
Homo sapiens
NNTRATKASN

NSTMATYANN
SELEX
Jolma et al.(2013)
MEOX2_1
0.621 0.667
MEOX2
M03104_2.00
Homo sapiens
NTAATTANVNTAATTAV

BTAATTANBNTAATTAN
SELEX
Jolma et al.(2013)
MEOX2_2
0.621 0.667
MEOX2
M03105_2.00
Homo sapiens
HTAATGATGATKAN

NTMATCATCATTAD
SELEX
Jolma et al.(2013)
MEOX2_3
0.621 0.667
Meox2
M03271_2.00
Mus musculus
NTAATKAN

NTMATTAN
SELEX
Jolma et al.(2013)
Meox2_1
0.621 0.667
MEOX2
M04988_2.00
Homo sapiens
NTDAYGHB

VDCRTHAN
SELEX
Yin et al.(2017)
MEOX2_FL_HT-SELEX_1
0.621 0.667
MEOX2
M04989_2.00
Homo sapiens
NTVATBRV

BYVATBAN
SELEX
Yin et al.(2017)
MEOX2_FL_HT-SELEX_2
0.621 0.667
Meox2
M10771_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEOX2_05
0.621 0.667
MEOX2
M04990_2.00
Homo sapiens
NTAAYGHB

VDCRTTAN
SELEX
Yin et al.(2017)
MEOX2_FL_Methyl-HT-SELEX_1
0.621 0.667
MEOX2
M04991_2.00
Homo sapiens
NTVATKRN

NYMATBAN
SELEX
Yin et al.(2017)
MEOX2_FL_Methyl-HT-SELEX_2
0.621 0.667
CBG23031
M01245_2.00
Caenorhabditis briggsae
NTTWATKRNN

NNYMATWAAN
PBM
Lambert et al.(2019)
pTH11458
0.614 0.596
HXD12_HETFR
M02196_2.00
Heterodontus francisci
TTWATKRC

GYMATWAA
PBM
Weirauch et al.(2014)
pTH6533
0.602 0.614
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000005320 Homeodomain 203 259

Links

Other Homeodomain family TFs
Other Astyanax mexicanus TFs

965 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_28212 Aegilops tauschii F775_28212 I 0.000
F775_22946 Aegilops tauschii F775_22946 I 0.000
AMTR_s00019p00232450 Amborella trichopoda AMTR_s00019p00232450 I 0.000
AMTR_s00025p00249140 Amborella trichopoda AMTR_s00025p00249140 I 0.000
AMTR_s00150p00091360 Amborella trichopoda AMTR_s00150p00091360 I 0.000
Aquca_006_00004 Aquilegia coerulea Aquca_006_00004 I 0.000
Aquca_016_00154 Aquilegia coerulea Aquca_016_00154 I 0.000
fgenesh2_kg.6__2505__AT5G25190.1 Arabidopsis lyrata fgenesh2_kg.6__2505__AT5G25190.1 I 0.000
SHN1 Arabidopsis lyrata fgenesh2_kg.1__1687__AT1G15360.1 I 0.000
ERF003 Arabidopsis thaliana AT5G25190 D 0.000
WIN1 Arabidopsis thaliana AT1G15360 D 0.000
Bostr.29827s0297 Boechera stricta Bostr.29827s0297 I 0.000
Bostr.7128s0149 Boechera stricta Bostr.7128s0149 I 0.000
BRADI1G47480 Brachypodium distachyon BRADI1G47480 I 0.000
BRADI1G36590 Brachypodium distachyon BRADI1G36590 I 0.000
BRADI3G54160 Brachypodium distachyon BRADI3G54160 I 0.000
BRADI3G07450 Brachypodium distachyon BRADI3G07450 I 0.000
Bo9g011440 Brassica oleracea Bo9g011440 I 0.000
Bo8g106100 Brassica oleracea Bo8g106100 I 0.000
Bo7g096180 Brassica oleracea Bo7g096180 I 0.000
Bo2g158960 Brassica oleracea Bo2g158960 I 0.000
Bo8g066410 Brassica oleracea Bo8g066410 I 0.000
Bra036536 Brassica rapa Bra036536 I 0.000
Bra026140 Brassica rapa Bra026140 I 0.000
Bra020490 Brassica rapa Bra020490 I 0.000
Bra016663 Brassica rapa Bra016663 I 0.000
Bra009824 Brassica rapa Bra009824 I 0.000
PK28394.1 Cannabis sativa PK28394.1 I 0.000
Cagra.1945s0014 Capsella grandiflora Cagra.1945s0014 I 0.000
Cagra.2238s0086 Capsella grandiflora Cagra.2238s0086 I 0.000
Carubv10001796m.g Capsella rubella Carubv10001796m.g I 0.000
Carubv10010317m.g Capsella rubella Carubv10010317m.g I 0.000
evm.TU.supercontig_10.254 Carica papaya evm.TU.supercontig_10.254 I 0.000
evm.TU.supercontig_127.4 Carica papaya evm.TU.supercontig_127.4 I 0.000
Ca_06673 Cicer arietinum Ca_06673 I 0.000
Ca_13435 Cicer arietinum Ca_13435 I 0.000
Ca_20050 Cicer arietinum Ca_20050 I 0.000
Ca_09076 Cicer arietinum Ca_09076 I 0.000
Ca_02880 Cicer arietinum Ca_02880 I 0.000
Ca_01729 Cicer arietinum Ca_01729 I 0.000
Cla015579 Citrullus lanatus Cla015579 I 0.000
Cla022694 Citrullus lanatus Cla022694 I 0.000
Cla022695 Citrullus lanatus Cla022695 I 0.000
Cla012435 Citrullus lanatus Cla012435 I 0.000
Cla006213 Citrullus lanatus Cla006213 I 0.000
Cla021320 Citrullus lanatus Cla021320 I 0.000
Cla012931 Citrullus lanatus Cla012931 I 0.000
Cla016967 Citrullus lanatus Cla016967 I 0.000
Ciclev10026602m.g Citrus clementina Ciclev10026602m.g I 0.000
Ciclev10009447m.g Citrus clementina Ciclev10009447m.g I 0.000
Ciclev10009593m.g Citrus clementina Ciclev10009593m.g I 0.000
Ciclev10027305m.g Citrus clementina Ciclev10027305m.g I 0.000
orange1.1g027896m.g Citrus sinensis orange1.1g027896m.g I 0.000
orange1.1g029507m.g Citrus sinensis orange1.1g029507m.g I 0.000
orange1.1g030482m.g Citrus sinensis orange1.1g030482m.g I 0.000
Cucsa.292670 Cucumis sativus Cucsa.292670 I 0.000
Cucsa.271720 Cucumis sativus Cucsa.271720 I 0.000
Cucsa.162720 Cucumis sativus Cucsa.162720 I 0.000
Cucsa.162710 Cucumis sativus Cucsa.162710 I 0.000
Cucsa.132120 Cucumis sativus Cucsa.132120 I 0.000
Cucsa.105830 Cucumis sativus Cucsa.105830 I 0.000
Cucsa.096220 Cucumis sativus Cucsa.096220 I 0.000
Eucgr.C01178 Eucalyptus grandis Eucgr.C01178 I 0.000
Eucgr.C02719 Eucalyptus grandis Eucgr.C02719 I 0.000
Eucgr.C04221 Eucalyptus grandis Eucgr.C04221 I 0.000
Eucgr.F03947 Eucalyptus grandis Eucgr.F03947 I 0.000
Thhalv10004973m.g Eutrema salsugineum Thhalv10004973m.g I 0.000
Thhalv10008845m.g Eutrema salsugineum Thhalv10008845m.g I 0.000
gene15036-v1.0-hybrid Fragaria vesca gene15036-v1.0-hybrid I 0.000
gene15940-v1.0-hybrid Fragaria vesca gene15940-v1.0-hybrid I 0.000
GLYMA06G06780 Glycine max GLYMA06G06780 I 0.000
GLYMA04G06690 Glycine max GLYMA04G06690 I 0.000
GLYMA17G33075 Glycine max GLYMA17G33075 I 0.000
GLYMA17G12330 Glycine max GLYMA17G12330 I 0.000
GLYMA15G01140 Glycine max GLYMA15G01140 I 0.000
GLYMA04G19650 Glycine max GLYMA04G19650 I 0.000
GLYMA06G29110 Glycine max GLYMA06G29110 I 0.000
GLYMA07G02930 Glycine max GLYMA07G02930 I 0.000
GLYMA08G22590 Glycine max GLYMA08G22590 I 0.000
GLYMA08G23160 Glycine max GLYMA08G23160 I 0.000
GLYMA15G00660 Glycine max GLYMA15G00660 I 0.000
GLYMA14G13470 Glycine max GLYMA14G13470 I 0.000
GLYMA13G23570 Glycine max GLYMA13G23570 I 0.000
GLYMA13G44660 Glycine max GLYMA13G44660 I 0.000
Gorai.009G017500 Gossypium raimondii Gorai.009G017500 I 0.000
Gorai.001G036500 Gossypium raimondii Gorai.001G036500 I 0.000
Gorai.001G042300 Gossypium raimondii Gorai.001G042300 I 0.000
Gorai.009G060600 Gossypium raimondii Gorai.009G060600 I 0.000
Gorai.009G125100 Gossypium raimondii Gorai.009G125100 I 0.000
MLOC_59305 Hordeum vulgare MLOC_59305 I 0.000
MLOC_55323 Hordeum vulgare MLOC_55323 I 0.000
MLOC_12747 Hordeum vulgare MLOC_12747 I 0.000
MLOC_6403 Hordeum vulgare MLOC_6403 I 0.000
LPERR06G17010 Leersia perrieri LPERR06G17010 I 0.000
LPERR06G04830 Leersia perrieri LPERR06G04830 I 0.000
LPERR02G29600 Leersia perrieri LPERR02G29600 I 0.000
LPERR02G06710 Leersia perrieri LPERR02G06710 I 0.000
Lus10035859.g Linum usitatissimum Lus10035859.g I 0.000
Lus10030097.g Linum usitatissimum Lus10030097.g I 0.000
Lus10016815.g Linum usitatissimum Lus10016815.g I 0.000
Lus10005716.g Linum usitatissimum Lus10005716.g I 0.000
Lus10009480.g Linum usitatissimum Lus10009480.g I 0.000
chr1.LjT03I11.120.nd Lotus japonicus chr1.LjT03I11.120.nd I 0.000
chr4.LjT07P17.60.nc Lotus japonicus chr4.LjT07P17.60.nc I 0.000
LjT09F21.30.nc Lotus japonicus LjT09F21.30.nc I 0.000
LjSGA_107677.3 Lotus japonicus LjSGA_107677.3 I 0.000
LjSGA_040388.1 Lotus japonicus LjSGA_040388.1 I 0.000
LjSGA_003590.1.1 Lotus japonicus LjSGA_003590.1.1 I 0.000
MDP0000127054 Malus domestica MDP0000127054 I 0.000
MDP0000124316 Malus domestica MDP0000124316 I 0.000
MDP0000290880 Malus domestica MDP0000290880 I 0.000
MDP0000279733 Malus domestica MDP0000279733 I 0.000
MDP0000172065 Malus domestica MDP0000172065 I 0.000
MDP0000243375 Malus domestica MDP0000243375 I 0.000
MDP0000873258 Malus domestica MDP0000873258 I 0.000
MDP0000430870 Malus domestica MDP0000430870 I 0.000
MDP0000297646 Malus domestica MDP0000297646 I 0.000
cassava8560.m1 Manihot esculenta cassava8560.m1 I 0.000
cassava38444.m1 Manihot esculenta cassava38444.m1 I 0.000
cassava11389.m1 Manihot esculenta cassava11389.m1 I 0.000
cassava20662.m1 Manihot esculenta cassava20662.m1 I 0.000
cassava24223.valid.m1 Manihot esculenta cassava24223.valid.m1 I 0.000
cassava34153.m1 Manihot esculenta cassava34153.m1 I 0.000
cassava38443.m1 Manihot esculenta cassava38443.m1 I 0.000
MTR_3g106290 Medicago truncatula MTR_3g106290 I 0.000
MTR_4g008860 Medicago truncatula MTR_4g008860 I 0.000
MTR_4g010640 Medicago truncatula MTR_4g010640 I 0.000
MTR_4g114570 Medicago truncatula MTR_4g114570 I 0.000
MTR_2g103700 Medicago truncatula MTR_2g103700 I 0.000
mgf005189m Mimulus guttatus mgf005189m I 0.000
GSMUA_Achr10G27000_001 Musa acuminata GSMUA_Achr10G27000_001 I 0.000
GSMUA_Achr9G28540_001 Musa acuminata GSMUA_Achr9G28540_001 I 0.000
GSMUA_Achr7G19320_001 Musa acuminata GSMUA_Achr7G19320_001 I 0.000
GSMUA_Achr7G16060_001 Musa acuminata GSMUA_Achr7G16060_001 I 0.000
GSMUA_Achr7G10160_001 Musa acuminata GSMUA_Achr7G10160_001 I 0.000
GSMUA_Achr6G05210_001 Musa acuminata GSMUA_Achr6G05210_001 I 0.000
GSMUA_Achr5G22840_001 Musa acuminata GSMUA_Achr5G22840_001 I 0.000
OBART02G35950 Oryza barthii OBART02G35950 I 0.000
OBART06G05300 Oryza barthii OBART06G05300 I 0.000
OBART02G07740 Oryza barthii OBART02G07740 I 0.000
OBART06G20370 Oryza barthii OBART06G20370 I 0.000
OB06G28040 Oryza brachyantha OB06G28040 I 0.000
OB06G14850 Oryza brachyantha OB06G14850 I 0.000
OB02G42740 Oryza brachyantha OB02G42740 I 0.000
OB02G17060 Oryza brachyantha OB02G17060 I 0.000
ORGLA02G0073000 Oryza glaberrima ORGLA02G0073000 I 0.000
ORGLA02G0312200 Oryza glaberrima ORGLA02G0312200 I 0.000
ORGLA06G0167900 Oryza glaberrima ORGLA06G0167900 I 0.000
OGLUM06G21440 Oryza glumaepatula OGLUM06G21440 I 0.000
OGLUM06G05450 Oryza glumaepatula OGLUM06G05450 I 0.000
OGLUM02G37170 Oryza glumaepatula OGLUM02G37170 I 0.000
OGLUM02G07820 Oryza glumaepatula OGLUM02G07820 I 0.000
BGIOSGA022427 Oryza indica BGIOSGA022427 I 0.000
BGIOSGA020923 Oryza indica BGIOSGA020923 I 0.000
BGIOSGA007748 Oryza indica BGIOSGA007748 I 0.000
BGIOSGA005433 Oryza indica BGIOSGA005433 I 0.000
OLONG_004398 Oryza longistaminata OLONG_004398 I 0.000
OLONG_016936 Oryza longistaminata OLONG_016936 I 0.000
OLONG_005458 Oryza longistaminata OLONG_005458 I 0.000
OMERI02G33910 Oryza meridionalis OMERI02G33910 I 0.000
OMERI06G06320 Oryza meridionalis OMERI06G06320 I 0.000
OMERI06G20980 Oryza meridionalis OMERI06G20980 I 0.000
ONIVA06G24150 Oryza nivara ONIVA06G24150 I 0.000
ONIVA06G06080 Oryza nivara ONIVA06G06080 I 0.000
ONIVA02G37990 Oryza nivara ONIVA02G37990 I 0.000
ONIVA02G09300 Oryza nivara ONIVA02G09300 I 0.000
OPUNC06G18570 Oryza punctata OPUNC06G18570 I 0.000
OPUNC06G05070 Oryza punctata OPUNC06G05070 I 0.000
OPUNC02G06960 Oryza punctata OPUNC02G06960 I 0.000
ORUFI06G21790 Oryza rufipogon ORUFI06G21790 I 0.000
ORUFI06G05350 Oryza rufipogon ORUFI06G05350 I 0.000
ORUFI03G26280 Oryza rufipogon ORUFI03G26280 I 0.000
OS02G0797100 Oryza sativa OS02G0797100 I 0.000
OS06G0181700 Oryza sativa OS06G0181700 I 0.000
OS02G0202000 Oryza sativa OS02G0202000 I 0.000
OS06G0604000 Oryza sativa OS06G0604000 I 0.000
Pavir.J20772 Panicum virgatum Pavir.J20772 I 0.000
Pavir.Da02059 Panicum virgatum Pavir.Da02059 I 0.000
Pavir.Aa00196 Panicum virgatum Pavir.Aa00196 I 0.000
Pavir.Aa02977 Panicum virgatum Pavir.Aa02977 I 0.000
Pavir.Ab00737 Panicum virgatum Pavir.Ab00737 I 0.000
Pavir.Da00422 Panicum virgatum Pavir.Da00422 I 0.000
Pavir.Db01224 Panicum virgatum Pavir.Db01224 I 0.000
Pavir.Ga00062 Panicum virgatum Pavir.Ga00062 I 0.000
Pavir.J12977 Panicum virgatum Pavir.J12977 I 0.000
PDK_20s1355821g002 Phoenix dactylifera PDK_20s1355821g002 I 0.000
gw1.21.122.1 Physcomitrella patens gw1.21.122.1 I 0.000
estExt_gwp_gw1.C_580005 Physcomitrella patens estExt_gwp_gw1.C_580005 I 0.000
POPTR_0018s02280 Populus trichocarpa POPTR_0018s02280 I 0.000
POPTR_0018s13130 Populus trichocarpa POPTR_0018s13130 I 0.000
POPTR_0006s27710 Populus trichocarpa POPTR_0006s27710 I 0.000
POPTR_0003s17830 Populus trichocarpa POPTR_0003s17830 I 0.000
SHN1 Populus trichocarpa POPTR_0003s02750 I 0.000
POPTR_0001s14720 Populus trichocarpa POPTR_0001s14720 I 0.000
Pm013752 Prunus mume Pm013752 I 0.000
Pm027542 Prunus mume Pm027542 I 0.000
Pm005717 Prunus mume Pm005717 I 0.000
PRUPE_ppa016477mg Prunus persica PRUPE_ppa016477mg I 0.000
PRUPE_ppa010601mg Prunus persica PRUPE_ppa010601mg I 0.000
PRUPE_ppa024826mg Prunus persica PRUPE_ppa024826mg I 0.000
PRUPE_ppa011795mg Prunus persica PRUPE_ppa011795mg I 0.000
29841.m002846 Ricinus communis 29841.m002846 I 0.000
29588.m000873 Ricinus communis 29588.m000873 I 0.000
28320.m001139 Ricinus communis 28320.m001139 I 0.000
29848.m004566 Ricinus communis 29848.m004566 I 0.000
SapurV1A.0705s0080 Salix purpurea SapurV1A.0705s0080 I 0.000
SapurV1A.1759s0040 Salix purpurea SapurV1A.1759s0040 I 0.000
SapurV1A.2028s0010 Salix purpurea SapurV1A.2028s0010 I 0.000
SapurV1A.0730s0010 Salix purpurea SapurV1A.0730s0010 I 0.000
SapurV1A.0280s0090 Salix purpurea SapurV1A.0280s0090 I 0.000
SapurV1A.0034s0630 Salix purpurea SapurV1A.0034s0630 I 0.000
SapurV1A.0199s0350 Salix purpurea SapurV1A.0199s0350 I 0.000
SapurV1A.0835s0060 Salix purpurea SapurV1A.0835s0060 I 0.000
SELMODRAFT_121842 Selaginella moellendorffii SELMODRAFT_121842 I 0.000
SELMODRAFT_92334 Selaginella moellendorffii SELMODRAFT_92334 I 0.000
Si024352m.g Setaria italica Si024352m.g I 0.000
Si018550m.g Setaria italica Si018550m.g I 0.000
Si007359m.g Setaria italica Si007359m.g I 0.000
Si008394m.g Setaria italica Si008394m.g I 0.000
Solyc06g068360.2 Solanum lycopersicum Solyc06g068360.2 I 0.000
Solyc03g117130.2 Solanum lycopersicum Solyc03g117130.2 I 0.000
Solyc12g009490.1 Solanum lycopersicum Solyc12g009490.1 I 0.000
Solyc06g065820.2 Solanum lycopersicum Solyc06g065820.2 I 0.000
Solyc03g116610.2 Solanum lycopersicum Solyc03g116610.2 I 0.000
PGSC0003DMG400014196 Solanum tuberosum PGSC0003DMG400014196 I 0.000
PGSC0003DMG400000636 Solanum tuberosum PGSC0003DMG400000636 I 0.000
PGSC0003DMG400002889 Solanum tuberosum PGSC0003DMG400002889 I 0.000
PGSC0003DMG400028500 Solanum tuberosum PGSC0003DMG400028500 I 0.000
PGSC0003DMG400026136 Solanum tuberosum PGSC0003DMG400026136 I 0.000
PGSC0003DMG400014127 Solanum tuberosum PGSC0003DMG400014127 I 0.000
Sb04g006970 Sorghum bicolor Sb04g006970 I 0.000
Sb10g023600 Sorghum bicolor Sb10g023600 I 0.000
Sb04g036020 Sorghum bicolor Sb04g036020 I 0.000
Sb10g005520 Sorghum bicolor Sb10g005520 I 0.000
Sb06g031230 Sorghum bicolor Sb06g031230 I 0.000
TCM_038081 Theobroma cacao TCM_038081 I 0.000
TCM_036933 Theobroma cacao TCM_036933 I 0.000
TCM_027157 Theobroma cacao TCM_027157 I 0.000
TCM_027394 Theobroma cacao TCM_027394 I 0.000
Traes_7DL_E1D7A51C8 Triticum aestivum Traes_7DL_E1D7A51C8 I 0.000
Traes_7AS_89D49F177 Triticum aestivum Traes_7AS_89D49F177 I 0.000
Traes_6DS_E6A0BE6CD Triticum aestivum Traes_6DS_E6A0BE6CD I 0.000
Traes_6DL_31D678054 Triticum aestivum Traes_6DL_31D678054 I 0.000
Traes_6AS_8E7166D79 Triticum aestivum Traes_6AS_8E7166D79 I 0.000
Traes_7DS_433704E8E Triticum aestivum Traes_7DS_433704E8E I 0.000
Traes_7DS_433704E8E1 Triticum aestivum Traes_7DS_433704E8E1 I 0.000
TRIUR3_25005 Triticum urartu TRIUR3_25005 I 0.000
TRIUR3_22374 Triticum urartu TRIUR3_22374 I 0.000
VIT_04s0008g06000 Vitis vinifera VIT_04s0008g06000 I 0.000
VIT_11s0016g05340 Vitis vinifera VIT_11s0016g05340 I 0.000
VIT_09s0002g09140 Vitis vinifera VIT_09s0002g09140 I 0.000
VIT_09s0002g09120 Vitis vinifera VIT_09s0002g09120 I 0.000
SHN1 Vitis vinifera VIT_09s0002g06750 I 0.000
GRMZM2G156006 Zea mays GRMZM2G156006 I 0.000
GRMZM2G067463 Zea mays GRMZM2G067463 I 0.000
GRMZM2G085678 Zea mays GRMZM2G085678 I 0.000
GRMZM2G104260 Zea mays GRMZM2G104260 I 0.000
GRMZM2G106591 Zea mays GRMZM2G106591 I 0.000
GRMZM2G135452 Zea mays GRMZM2G135452 I 0.000
GRMZM2G111415 Zea mays GRMZM2G111415 I 0.000