CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSAMXG00000009415
(
Astyanax mexicanus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSAMXG00000009415
T207104_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hoxd3
M00531_2.00
Mus musculus
NTAATNDN
NHNATTAN
PBM
Berger et al.(2008)
Hoxd3_1742
0.691
0.807
Hoxa3
M00172_2.00
Mus musculus
NTAATKRNNN
NNNYMATTAN
PBM
Badis et al.(2009)
Hoxa3_2783
0.691
0.807
Hoxa3
M00532_2.00
Mus musculus
NTAATKRNN
NNYMATTAN
PBM
Berger et al.(2008)
Hoxa3_2783
0.691
0.807
Hoxd3
M03287_2.00
Mus musculus
NNTAATKRNN
NNYMATTANN
SELEX
Jolma et al.(2013)
Hoxd3_1
0.691
0.807
HOXD3
M05101_2.00
Homo sapiens
CTAATTAS
STAATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_HT-SELEX
0.691
0.807
HOXA3
M10651_2.00
Homo sapiens
SVTWNDDKB
VMHHNWABS
Transfac
Matys et al.(2006)
V$HOXA3_01
0.691
0.807
HOXD3
M05102_2.00
Homo sapiens
YTAAYGAY
RTCRTTAR
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_1
0.691
0.807
HOXD3
M05103_2.00
Homo sapiens
CTAATKAC
GTMATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_2
0.691
0.807
Hoxb3
M00504_2.00
Mus musculus
NTAATKRNN
NNYMATTAN
PBM
Berger et al.(2008)
Hoxb3_1720
0.691
0.789
HOXB3
M03126_2.00
Homo sapiens
NBTAATKRNN
NNYMATTAVN
SELEX
Jolma et al.(2013)
HOXB3_1
0.691
0.789
zen
M03805_2.00
Drosophila melanogaster
BTAATKRB
VYMATTAV
SELEX
Nitta et al.(2015)
zen_1
0.662
0.667
zen
M06500_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Mathelier et al.(2014)
MA0256.1
0.662
0.667
zen
M06276_2.00
Drosophila melanogaster
NBYTAATKA
TMATTARBN
B1H
Zhu et al.(2011)
Zen_Cell_FBgn0004053
0.662
0.667
zen
M06277_2.00
Drosophila melanogaster
AANWTWAWTG
CAWTWAWNTT
B1H
Zhu et al.(2011)
zen_FlyReg_FBgn0004053
0.662
0.667
zen
M06278_2.00
Drosophila melanogaster
NYTAATKA
TMATTARN
B1H
Zhu et al.(2011)
Zen_SOLEXA_FBgn0004053
0.662
0.667
zen2
M02118_2.00
Drosophila melanogaster
NNTAATKRNN
NNYMATTANN
PBM
Weirauch et al.(2014)
pTH5479
0.661
0.667
zen2
M03806_2.00
Drosophila melanogaster
BTAATKAS
STMATTAV
SELEX
Nitta et al.(2015)
zen2_1
0.661
0.667
zen2
M03807_2.00
Drosophila melanogaster
BTAATKWNNVRNNNNYBNNWMATTAV
BTAATKWNNVRNNNNYBNNWMATTAV
SELEX
Nitta et al.(2015)
zen2_2
0.661
0.667
zen2
M06501_2.00
Drosophila melanogaster
BTAATKA
TMATTAV
B1H
Mathelier et al.(2014)
MA0257.1
0.661
0.667
zen2
M06279_2.00
Drosophila melanogaster
HNBTAATKA
TMATTAVND
B1H
Zhu et al.(2011)
Zen2_Cell_FBgn0004054
0.661
0.667
zen2
M06280_2.00
Drosophila melanogaster
NNNTAATKRN
NYMATTANNN
B1H
Zhu et al.(2011)
zen2_SOLEXA_2_FBgn0004054
0.661
0.667
zen2
M06281_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Zhu et al.(2011)
Zen2_SOLEXA_FBgn0004054
0.661
0.667
SPU_026099
M02175_2.00
Strongylocentrotus purpuratus
KTAATTRB
VYAATTAM
PBM
Weirauch et al.(2014)
pTH6140
0.656
0.702
Pdx1
M00446_2.00
Mus musculus
NWRAYNNN
NNNRTYWN
PBM
Berger et al.(2008)
Ipf1_3815
0.655
0.684
PDX1
M03155_2.00
Homo sapiens
NTAATTRNNNYTAATTRN
NYAATTARNNNYAATTAN
SELEX
Jolma et al.(2013)
PDX1_1
0.655
0.684
PDX1
M03156_2.00
Homo sapiens
BTAATKRN
NYMATTAV
SELEX
Jolma et al.(2013)
PDX1_2
0.655
0.684
PDX1
M05161_2.00
Homo sapiens
YTAATKRB
VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_HT-SELEX
0.655
0.684
PDX1
M09147_2.00
Homo sapiens
TGATWGATK
MATCWATCA
Misc
Kulakovskiy et al.(2013)
PDX1_HUMAN.H11MO.0.A
0.655
0.684
Pdx1
M09192_2.00
Mus musculus
VYTAATGRB
VYCATTARB
Misc
Kulakovskiy et al.(2013)
PDX1_MOUSE.H11MO.0.B
0.655
0.684
Pdx1
M09571_2.00
Mus musculus
TGATTRATKR
YMATYAATCA
Misc
Heinz et al.(2010)
Islet-Pdx1_SRA008281
0.655
0.684
PDX1
M10699_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_01
0.655
0.684
PDX1
M10700_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_02
0.655
0.684
PDX1
M10701_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_03
0.655
0.684
PDX1
M10702_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_04
0.655
0.684
PDX1
M10703_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_05
0.655
0.684
PDX1
M10704_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4_01
0.655
0.684
PDX1
M10705_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4
0.655
0.684
PDX1
M10706_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5_01
0.655
0.684
PDX1
M10707_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5
0.655
0.684
PDX1
M10708_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q6
0.655
0.684
PDX1
M05162_2.00
Homo sapiens
HTAAYGAB
VTCRTTAD
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_1
0.655
0.684
PDX1
M05163_2.00
Homo sapiens
YTAATKRB
VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_2
0.655
0.684
Dbx1
M00451_2.00
Mus musculus
WTTAATTA
TAATTAAW
PBM
Berger et al.(2008)
Dbx1_3486
0.654
0.474
Dbx
M02128_2.00
Drosophila melanogaster
WTTAATTA
TAATTAAW
PBM
Weirauch et al.(2014)
pTH6051
0.654
0.474
Dbx
M06550_2.00
Drosophila melanogaster
TTWATKA
TMATWAA
B1H
Mathelier et al.(2014)
MA0174.1
0.654
0.474
bap
M00560_2.00
Drosophila melanogaster
NDAAGTRBNN
NNVYACTTHN
PBM
Busser et al.(2012a)
Bap
0.648
0.579
bap
M02119_2.00
Drosophila melanogaster
NYTAAGTRSNN
NNSYACTTARN
PBM
Weirauch et al.(2014)
pTH5945
0.648
0.579
bap
M03812_2.00
Drosophila melanogaster
NNTAAGTGBN
NVCACTTANN
SELEX
Nitta et al.(2015)
bap_1
0.648
0.579
bap
M06504_2.00
Drosophila melanogaster
TTAAGTR
YACTTAA
B1H
Mathelier et al.(2014)
MA0211.1
0.648
0.579
bap
M06287_2.00
Drosophila melanogaster
NBTTAAGTRN
NYACTTAAVN
B1H
Zhu et al.(2011)
Bap_Cell_FBgn0004862
0.648
0.579
bap
M06288_2.00
Drosophila melanogaster
NYTAAKTR
YAMTTARN
B1H
Zhu et al.(2011)
Bap_SOLEXA_FBgn0004862
0.648
0.579
Nkx3-1
M00170_2.00
Mus musculus
NDAAGTRBNN
NNVYACTTHN
PBM
Badis et al.(2009)
Nkx3-1_2923
0.645
0.561
Nkx3-1
M00420_2.00
Mus musculus
NNAAGTRBNN
NNVYACTTNN
PBM
Berger et al.(2008)
Nkx3-1_2923
0.645
0.561
Nkx3-2
M00506_2.00
Mus musculus
NNRAGDRNN
NNYHCTYNN
PBM
Berger et al.(2008)
Bapx1_2343
0.645
0.561
NKX3-1
M05255_2.00
Homo sapiens
NNTAAGTGSN
NSCACTTANN
SELEX
Yin et al.(2017)
NKX3-1_eDBD_HT-SELEX
0.645
0.561
NKX3-2
M05012_2.00
Homo sapiens
NNTAAGTGSN
NSCACTTANN
SELEX
Yin et al.(2017)
NKX3-2_eDBD_HT-SELEX
0.645
0.561
NKX3-1
M09154_2.00
Homo sapiens
NYDAAGTGBYWD
HWRVCACTTHRN
Misc
Kulakovskiy et al.(2013)
NKX31_HUMAN.H11MO.0.C
0.645
0.561
NKX3-2
M09138_2.00
Homo sapiens
TTAAGTGBNH
DNVCACTTAA
Misc
Kulakovskiy et al.(2013)
NKX32_HUMAN.H11MO.0.C
0.645
0.561
Nkx3-1
M09184_2.00
Mus musculus
NYDAAGTGBYWD
HWRVCACTTHRN
Misc
Kulakovskiy et al.(2013)
NKX31_MOUSE.H11MO.0.C
0.645
0.561
Nkx3-2
M09212_2.00
Mus musculus
TTAAGTGBNH
DNVCACTTAA
Misc
Kulakovskiy et al.(2013)
NKX32_MOUSE.H11MO.0.B
0.645
0.561
NKX3-1
M09559_2.00
Homo sapiens
BTRAGTRBYY
RRVYACTYAV
Misc
Heinz et al.(2010)
LNCaP-Nkx3.1_GSE28264
0.645
0.561
NKX3-1
M10729_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GT1_Q6_01
0.645
0.561
NKX3-2
M10663_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX32_01
0.645
0.561
NKX3-1
M10730_2.00
Homo sapiens
NWWTAAGTATWH
DWATACTTAWWN
Transfac
Matys et al.(2006)
V$NKX3A_01
0.645
0.561
NKX3-1
M10731_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX3A_Q3
0.645
0.561
NKX3-1
M05256_2.00
Homo sapiens
NNTAAGTGBN
NVCACTTANN
SELEX
Yin et al.(2017)
NKX3-1_eDBD_Methyl-HT-SELEX_1
0.645
0.561
NKX3-1
M05257_2.00
Homo sapiens
NTAAYSWB
VWSRTTAN
SELEX
Yin et al.(2017)
NKX3-1_eDBD_Methyl-HT-SELEX_2
0.645
0.561
NKX3-2
M05013_2.00
Homo sapiens
NNTAAGTGBN
NVCACTTANN
SELEX
Yin et al.(2017)
NKX3-2_eDBD_Methyl-HT-SELEX_1
0.645
0.561
NKX3-2
M05014_2.00
Homo sapiens
NTAACGHB
VDCGTTAN
SELEX
Yin et al.(2017)
NKX3-2_eDBD_Methyl-HT-SELEX_2
0.645
0.561
Q0N4M8_NEMVE
M02166_2.00
Nematostella vectensis
HTAATKAC
GTMATTAD
PBM
Weirauch et al.(2014)
pTH6215
0.645
0.702
Hlx
M00485_2.00
Mus musculus
NNNAWND
HNWTNNN
PBM
Berger et al.(2008)
Hlx1_2350
0.645
0.474
H2.0
M06489_2.00
Drosophila melanogaster
WTWATDA
THATWAW
B1H
Mathelier et al.(2014)
MA0448.1
0.645
0.456
H2.0
M06250_2.00
Drosophila melanogaster
TWWWWDA
THAWWWA
B1H
Zhu et al.(2011)
H2.0_Cell_FBgn0001170
0.645
0.456
H2.0
M06251_2.00
Drosophila melanogaster
WTWATTRN
NYAATWAW
B1H
Zhu et al.(2011)
H2.0_SOLEXA_FBgn0001170
0.645
0.456
ENSCING00000007395
M02076_2.00
Ciona intestinalis
NNNDWNWR
YWNWHNNN
PBM
Weirauch et al.(2014)
pTH5922
0.635
0.544
Dbx2
M00499_2.00
Mus musculus
NNDTNNN
NNNAHNN
PBM
Berger et al.(2008)
Dbx2_3487
0.634
0.421
HOXD4
M05273_2.00
Homo sapiens
NTMATKRV
BYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_HT-SELEX
0.620
0.702
HOXD4
M05276_2.00
Homo sapiens
NTAATKRB
VYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_HT-SELEX
0.620
0.702
HOXD4
M05274_2.00
Homo sapiens
NTMATKRN
NYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_1
0.620
0.702
HOXD4
M05275_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_2
0.620
0.702
HOXD4
M05277_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_1
0.620
0.702
HOXD4
M05278_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_2
0.620
0.702
Hoxa4
M00383_2.00
Mus musculus
NTAATBDNN
NNHVATTAN
PBM
Berger et al.(2008)
Hoxa4_3426
0.620
0.684
HOXA4
M05381_2.00
Homo sapiens
NTAATKRY
RYMATTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_HT-SELEX
0.620
0.684
HOXA4
M10755_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA4_Q2
0.620
0.684
HOXA4
M05382_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_Methyl-HT-SELEX
0.620
0.684
HOXC4
M00328_2.00
Homo sapiens
YTAATTAB
VTAATTAR
PBM
Barrera et al.(2016)
HOXC4_N178S
0.615
0.702
HOXC4
M00330_2.00
Homo sapiens
YTAATTRB
VYAATTAR
PBM
Barrera et al.(2016)
HOXC4_REF
0.615
0.684
Hoxb4
M00479_2.00
Mus musculus
NTAATNDNN
NNHNATTAN
PBM
Berger et al.(2008)
Hoxb4_2627
0.615
0.684
Hoxc4
M00530_2.00
Mus musculus
NWAATNDNN
NNHNATTWN
PBM
Berger et al.(2008)
Hoxc4_3491
0.615
0.684
HOXB4
M05343_2.00
Homo sapiens
YTAATKAY
RTMATTAR
SELEX
Yin et al.(2017)
HOXB4_FL_HT-SELEX
0.615
0.684
HOXC4
M05385_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_HT-SELEX
0.615
0.684
HOXB4
M09162_2.00
Homo sapiens
YTAATKRS
SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_HUMAN.H11MO.0.B
0.615
0.684
Hoxb4
M09204_2.00
Mus musculus
YTAATKRS
SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_MOUSE.H11MO.0.A
0.615
0.684
Hoxb4
M09576_2.00
Mus musculus
TGATDRATKRSN
NSYMATYHATCA
Misc
Heinz et al.(2010)
ES-Hoxb4_GSE34014
0.615
0.684
HOXB4
M05344_2.00
Homo sapiens
HTAAYGAY
RTCRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_1
0.615
0.684
HOXB4
M05345_2.00
Homo sapiens
HTAAYKAB
VTMRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_2
0.615
0.684
HOXC4
M05386_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_1
0.615
0.684
HOXC4
M05387_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_2
0.615
0.684
Hoxa5
M00478_2.00
Mus musculus
NTAATNDNN
NNHNATTAN
PBM
Berger et al.(2008)
Hoxa5_3415
0.611
0.684
Hoxb5
M00480_2.00
Mus musculus
NWDWTNNNN
NNNNAWHWN
PBM
Berger et al.(2008)
Hoxb5_3122
0.611
0.684
HOXB5
M03125_2.00
Homo sapiens
NNKAATKRNN
NNYMATTMNN
SELEX
Jolma et al.(2013)
HOXB5_1
0.611
0.684
HOXA5
M04968_2.00
Homo sapiens
STAATKRS
SYMATTAS
SELEX
Yin et al.(2017)
HOXA5_eDBD_HT-SELEX
0.611
0.684
HOXA5
M04971_2.00
Homo sapiens
NTMATKRB
VYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_HT-SELEX
0.611
0.684
HOXB5
M05051_2.00
Homo sapiens
NTAATKRV
BYMATTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_HT-SELEX
0.611
0.684
HOXB5
M05054_2.00
Homo sapiens
STMATKAB
VTMATKAS
SELEX
Yin et al.(2017)
HOXB5_FL_HT-SELEX
0.611
0.684
HOXA5
M10652_2.00
Homo sapiens
NGRDBKBDHNBAVTAATKRRGRDVDDDGSR
YSCHHHBHYCYYMATTABTVNDHVMVHYCN
Transfac
Matys et al.(2006)
V$HOX13_01
0.611
0.684
HOXA5
M08457_2.00
Homo sapiens
CDBWAATK
MATTWVHG
COMPILED
Mathelier et al.(2014)
MA0158.1
0.611
0.684
HOXA5
M04969_2.00
Homo sapiens
BTAATKRV
BYMATTAV
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_1
0.611
0.684
HOXA5
M04970_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_2
0.611
0.684
HOXA5
M04972_2.00
Homo sapiens
NTMATKRN
NYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_1
0.611
0.684
HOXA5
M04973_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_2
0.611
0.684
HOXB5
M05052_2.00
Homo sapiens
NTMATKRN
NYMATKAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_1
0.611
0.684
HOXB5
M05053_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_2
0.611
0.684
HOXB5
M05055_2.00
Homo sapiens
NTMATKAB
VTMATKAN
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_1
0.611
0.684
HOXB5
M05056_2.00
Homo sapiens
HTAAYGAY
RTCRTTAD
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_2
0.611
0.684
Dfd
M03784_2.00
Drosophila melanogaster
VNTAAYKRBN
NVYMRTTANB
SELEX
Nitta et al.(2015)
Dfd_1
0.607
0.667
Dfd
M03785_2.00
Drosophila melanogaster
VYTAATKAYN
NRTMATTARB
SELEX
Nitta et al.(2015)
Dfd_2
0.607
0.667
Dfd
M06481_2.00
Drosophila melanogaster
YTAATGA
TCATTAR
B1H
Mathelier et al.(2014)
MA0186.1
0.607
0.667
Dfd
M06226_2.00
Drosophila melanogaster
VYTAATGA
TCATTAAB
B1H
Zhu et al.(2011)
Dfd_Cell_FBgn0000439
0.607
0.667
Dfd
M06227_2.00
Drosophila melanogaster
TTAATKRY
RYMATTAA
B1H
Zhu et al.(2011)
Dfd_FlyReg_FBgn0000439
0.607
0.667
Dfd
M06228_2.00
Drosophila melanogaster
NBTAATKR
YMATTAVN
B1H
Zhu et al.(2011)
Dfd_SOLEXA_FBgn0000439
0.607
0.667
lin-39
M08211_2.00
Caenorhabditis elegans
GATTGATG
CATCAATC
ChIP-seq
Contrino et al.(2012)
Mw154
0.607
0.667
lin-39
M09582_2.00
Caenorhabditis elegans
DTGATWRATK
MATYWATCAH
Misc
Heinz et al.(2010)
cElegans.L3-LIN39_modEncode
0.607
0.667
Dfd
M09675_2.00
Drosophila melanogaster
TTAATKRB
VYMATTAA
Misc
Kulakovskiy et al.(2009)
Dfd
0.607
0.667
Dfd
M10784_2.00
Drosophila melanogaster
NNNNRKTAATNNNNNN
NNNNNNATTAMYNNNN
Transfac
Matys et al.(2006)
I$DFD_01
0.607
0.667
Hoxc5
M00422_2.00
Mus musculus
NWRATND
HNATYWN
PBM
Berger et al.(2008)
Hoxc5_2630
0.607
0.684
exex
M03871_2.00
Drosophila melanogaster
NNNNYAATTNNYDN
NHRNNAATTRNNNN
SELEX
Nitta et al.(2015)
exex_1
0.601
0.632
exex
M06544_2.00
Drosophila melanogaster
BTAATTA
TAATTAV
B1H
Mathelier et al.(2014)
MA0224.1
0.601
0.632
exex
M06364_2.00
Drosophila melanogaster
TAATTAV
BTAATTA
B1H
Zhu et al.(2011)
Exex_Cell_FBgn0041156
0.601
0.632
exex
M06365_2.00
Drosophila melanogaster
TAATBR
YVATTA
B1H
Zhu et al.(2011)
Exex_SOLEXA_FBgn0041156
0.601
0.632
Mnx1
M00388_2.00
Mus musculus
NTAATBDNNN
NNNHVATTAN
PBM
Berger et al.(2008)
Hlxb9_3422
0.601
0.614
MNX1
M03143_2.00
Homo sapiens
NHTAATTRNH
DNYAATTADN
SELEX
Jolma et al.(2013)
MNX1_1
0.601
0.614
MNX1
M05126_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
MNX1_eDBD_HT-SELEX
0.601
0.614
MNX1
M05127_2.00
Homo sapiens
HTAAYGHB
VDCRTTAD
SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_1
0.601
0.614
MNX1
M05128_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_2
0.601
0.614
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSAMXP00000009674
Homeodomain
66
122
KRSRAAFTSSQLLELEKEFHFSAYLCRPRRLEMASLLKLTDRQIKIWFQNRRMKYKK
Links
Other
Homeodomain
family TFs
Other
Astyanax mexicanus
TFs
1586 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy