HOXA11 (Bos taurus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSBTAG00000014738 T207481_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hoxa11
M00474_2.00
Mus musculus
NNHNHNNNN

NNNNDNDNN
PBM
Berger et al.(2008)
Hoxa11_2218
0.867 1.000
Hoxa11
M03274_2.00
Mus musculus
NNDTTWAYGABN

NVTCRTWAAHNN
SELEX
Jolma et al.(2013)
Hoxa11_1
0.867 1.000
Hoxa11
M03275_2.00
Mus musculus
NDTTWATKRNN

NNYMATWAAHN
SELEX
Jolma et al.(2013)
Hoxa11_2
0.867 1.000
HOXA11
M04897_2.00
Homo sapiens
VGTCGTAAAWH

DWTTTACGACB
SELEX
Yin et al.(2017)
HOXA11_eDBD_HT-SELEX_1
0.867 1.000
HOXA11
M04898_2.00
Homo sapiens
DDTTWATKRSN

NSYMATWAAHH
SELEX
Yin et al.(2017)
HOXA11_eDBD_HT-SELEX_2
0.867 1.000
HOXA11
M04899_2.00
Homo sapiens
NRTCGTAAAWH

DWTTTACGAYN
SELEX
Yin et al.(2017)
HOXA11_eDBD_Methyl-HT-SELEX_1
0.867 1.000
HOXA11
M04900_2.00
Homo sapiens
DYTTTATKRCH

DGYMATAAARH
SELEX
Yin et al.(2017)
HOXA11_eDBD_Methyl-HT-SELEX_2
0.867 1.000
Hoxd11
M00493_2.00
Mus musculus
DDDNNNNN

NNNNNHHH
PBM
Berger et al.(2008)
Hoxd11_3873
0.867 0.982
HOXD11
M03139_2.00
Homo sapiens
RTCGTAAAWH

DWTTTACGAY
SELEX
Jolma et al.(2013)
HOXD11_1
0.867 0.982
HOXD11
M03140_2.00
Homo sapiens
TTTWATKRBH

DVYMATWAAA
SELEX
Jolma et al.(2013)
HOXD11_2
0.867 0.982
HOXD11
M05120_2.00
Homo sapiens
NRTCGTWAANNDTWAH

DTWAHNNTTWACGAYN
SELEX
Yin et al.(2017)
HOXD11_eDBD_HT-SELEX
0.867 0.982
HOXD11
M05121_2.00
Homo sapiens
NRTCGTWAAHNDTWAH

DTWAHNDTTWACGAYN
SELEX
Yin et al.(2017)
HOXD11_eDBD_Methyl-HT-SELEX
0.867 0.982
Hoxc11
M00390_2.00
Mus musculus
NTTWAYDDBN

NVHHRTWAAN
PBM
Berger et al.(2008)
Hoxc11_3718
0.867 0.947
HOXC11
M03131_2.00
Homo sapiens
NWTTWAYGAYH

DRTCRTWAAWN
SELEX
Jolma et al.(2013)
HOXC11_1
0.867 0.947
HOXC11
M03132_2.00
Homo sapiens
NWTTWATKRBH

DVYMATWAAWN
SELEX
Jolma et al.(2013)
HOXC11_2
0.867 0.947
HOXC11
M03133_2.00
Homo sapiens
DRTCGTWAAWN

NWTTWACGAYH
SELEX
Jolma et al.(2013)
HOXC11_3
0.867 0.947
HOXC11
M03134_2.00
Homo sapiens
NTTTTATKRBN

NVYMATAAAAN
SELEX
Jolma et al.(2013)
HOXC11_4
0.867 0.947
HOXC11
M05075_2.00
Homo sapiens
NDTTWACGAYN

NRTCGTWAAHN
SELEX
Yin et al.(2017)
HOXC11_eDBD_HT-SELEX_1
0.867 0.947
HOXC11
M05076_2.00
Homo sapiens
NWTTWATKRCH

DGYMATWAAWN
SELEX
Yin et al.(2017)
HOXC11_eDBD_HT-SELEX_2
0.867 0.947
HOXC11
M05079_2.00
Homo sapiens
NRTCGTWAAHN

NDTTWACGAYN
SELEX
Yin et al.(2017)
HOXC11_FL_HT-SELEX_1
0.867 0.947
HOXC11
M05080_2.00
Homo sapiens
NDTTWATKRSN

NSYMATWAAHN
SELEX
Yin et al.(2017)
HOXC11_FL_HT-SELEX_2
0.867 0.947
HOXC11
M05077_2.00
Homo sapiens
NRTCGTAAAHN

NDTTTACGAYN
SELEX
Yin et al.(2017)
HOXC11_eDBD_Methyl-HT-SELEX_1
0.867 0.947
HOXC11
M05078_2.00
Homo sapiens
NDTTTATKRSN

NSYMATAAAHN
SELEX
Yin et al.(2017)
HOXC11_eDBD_Methyl-HT-SELEX_2
0.867 0.947
HOXC11
M05081_2.00
Homo sapiens
NRTCGTWAANN

NNTTWACGAYN
SELEX
Yin et al.(2017)
HOXC11_FL_Methyl-HT-SELEX_1
0.867 0.947
HOXC11
M05082_2.00
Homo sapiens
NNTTWAYKRSN

NSYMRTWAANN
SELEX
Yin et al.(2017)
HOXC11_FL_Methyl-HT-SELEX_2
0.867 0.947
Hoxc10
M00421_2.00
Mus musculus
TTWATKAB

VTMATWAA
PBM
Berger et al.(2008)
Hoxc10_2779
0.766 0.702
Hoxd10
M00509_2.00
Mus musculus
NNNNNNNN

NNNNNNNN
PBM
Berger et al.(2008)
Hoxd10_2368
0.766 0.702
HOXC10
M03228_2.00
Homo sapiens
DTTTWATKDB

VHMATWAAAH
SELEX
Jolma et al.(2013)
HOXC10_1
0.766 0.702
HOXC10
M03229_2.00
Homo sapiens
NNTTWATKRB

VYMATWAANN
SELEX
Jolma et al.(2013)
HOXC10_2
0.766 0.702
HOXC10
M03230_2.00
Homo sapiens
NWTTWAYGAB

VTCRTWAAWN
SELEX
Jolma et al.(2013)
HOXC10_3
0.766 0.702
Hoxc10
M03252_2.00
Mus musculus
DTTTWAYGAY

RTCRTWAAAH
SELEX
Jolma et al.(2013)
Hoxc10_1
0.766 0.702
Hoxc10
M03253_2.00
Mus musculus
DTTTWATKRY

RYMATWAAAH
SELEX
Jolma et al.(2013)
Hoxc10_2
0.766 0.702
HOXC10
M05335_2.00
Homo sapiens
NDTTTATKRCN

NGYMATAAAHN
SELEX
Yin et al.(2017)
HOXC10_eDBD_HT-SELEX_1
0.766 0.702
HOXC10
M05336_2.00
Homo sapiens
NRTCGTAAAHN

NDTTTACGAYN
SELEX
Yin et al.(2017)
HOXC10_eDBD_HT-SELEX_2
0.766 0.702
HOXC10
M05339_2.00
Homo sapiens
NTTTTATKRCN

NGYMATAAAAN
SELEX
Yin et al.(2017)
HOXC10_FL_HT-SELEX_1
0.766 0.702
HOXC10
M05340_2.00
Homo sapiens
NRTCGTAAAWN

NWTTTACGAYN
SELEX
Yin et al.(2017)
HOXC10_FL_HT-SELEX_2
0.766 0.702
HOXD10
M05112_2.00
Homo sapiens
NKTTTATKRC

GYMATAAAMN
SELEX
Yin et al.(2017)
HOXD10_eDBD_HT-SELEX_1
0.766 0.702
HOXD10
M05113_2.00
Homo sapiens
RTCGTAAAHN

NDTTTACGAY
SELEX
Yin et al.(2017)
HOXD10_eDBD_HT-SELEX_2
0.766 0.702
HOXD10
M05116_2.00
Homo sapiens
RGTCGTAAAAH

DTTTTACGACY
SELEX
Yin et al.(2017)
HOXD10_FL_HT-SELEX_1
0.766 0.702
HOXD10
M05117_2.00
Homo sapiens
RRYMATAAAAH

DTTTTATKRYY
SELEX
Yin et al.(2017)
HOXD10_FL_HT-SELEX_2
0.766 0.702
HOXD10
M10687_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXD10_Q2
0.766 0.702
HOXD10
M10688_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXD10_Q6
0.766 0.702
HOXC10
M05337_2.00
Homo sapiens
NTTTTATKRCN

NGYMATAAAAN
SELEX
Yin et al.(2017)
HOXC10_eDBD_Methyl-HT-SELEX_1
0.766 0.702
HOXC10
M05338_2.00
Homo sapiens
NRTCGTAAAHN

NDTTTACGAYN
SELEX
Yin et al.(2017)
HOXC10_eDBD_Methyl-HT-SELEX_2
0.766 0.702
HOXC10
M05341_2.00
Homo sapiens
DTTTTATKRCH

DGYMATAAAAH
SELEX
Yin et al.(2017)
HOXC10_FL_Methyl-HT-SELEX_1
0.766 0.702
HOXC10
M05342_2.00
Homo sapiens
VGTCGTAAAHN

NDTTTACGACB
SELEX
Yin et al.(2017)
HOXC10_FL_Methyl-HT-SELEX_2
0.766 0.702
HOXD10
M05114_2.00
Homo sapiens
NTTTTATKRC

GYMATAAAAN
SELEX
Yin et al.(2017)
HOXD10_eDBD_Methyl-HT-SELEX_1
0.766 0.702
HOXD10
M05115_2.00
Homo sapiens
GTCGTAAAHN

NDTTTACGAC
SELEX
Yin et al.(2017)
HOXD10_eDBD_Methyl-HT-SELEX_2
0.766 0.702
HOXD10
M05118_2.00
Homo sapiens
VGTCGTAAAAH

DTTTTACGACB
SELEX
Yin et al.(2017)
HOXD10_FL_Methyl-HT-SELEX_1
0.766 0.702
HOXD10
M05119_2.00
Homo sapiens
DGYAATAAAAH

DTTTTATTRCH
SELEX
Yin et al.(2017)
HOXD10_FL_Methyl-HT-SELEX_2
0.766 0.702
Hoxa10
M00382_2.00
Mus musculus
NHWAYNNNN

NNNNRTWDN
PBM
Berger et al.(2008)
Hoxa10_2318
0.764 0.702
HOXA10
M05394_2.00
Homo sapiens
RRTCGTAAAAH

DTTTTACGAYY
SELEX
Yin et al.(2017)
HOXA10_eDBD_HT-SELEX_1
0.764 0.702
HOXA10
M05395_2.00
Homo sapiens
NTTTTATKRCY

RGYMATAAAAN
SELEX
Yin et al.(2017)
HOXA10_eDBD_HT-SELEX_2
0.764 0.702
HOXA10
M05398_2.00
Homo sapiens
NRTCRTWAANN

NNTTWAYGAYN
SELEX
Yin et al.(2017)
HOXA10_FL_HT-SELEX_1
0.764 0.702
HOXA10
M05399_2.00
Homo sapiens
NNTTWATKRCN

NGYMATWAANN
SELEX
Yin et al.(2017)
HOXA10_FL_HT-SELEX_2
0.764 0.702
Hoxa10
M09170_2.00
Mus musculus
DCATAAAYYRBH

DVYRRTTTATGH
Misc
Kulakovskiy et al.(2013)
HXA10_MOUSE.H11MO.0.C
0.764 0.702
Hoxa10
M10763_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA10_Q5
0.764 0.702
HOXA10
M05396_2.00
Homo sapiens
NGTCGTAAAWN

NWTTTACGACN
SELEX
Yin et al.(2017)
HOXA10_eDBD_Methyl-HT-SELEX_1
0.764 0.702
HOXA10
M05397_2.00
Homo sapiens
NTTTTATKRCB

VGYMATAAAAN
SELEX
Yin et al.(2017)
HOXA10_eDBD_Methyl-HT-SELEX_2
0.764 0.702
HOXA10
M05400_2.00
Homo sapiens
NRTCGTWAANN

NNTTWACGAYN
SELEX
Yin et al.(2017)
HOXA10_FL_Methyl-HT-SELEX_1
0.764 0.702
HOXA10
M05401_2.00
Homo sapiens
NNTTWATKRYN

NRYMATWAANN
SELEX
Yin et al.(2017)
HOXA10_FL_Methyl-HT-SELEX_2
0.764 0.702
Hoxd9
M03282_2.00
Mus musculus
TTTWATKKB

VMMATWAAA
SELEX
Jolma et al.(2013)
Hoxd9_1
0.750 0.684
Hoxd9
M03283_2.00
Mus musculus
DWTTWATKRY

RYMATWAAWH
SELEX
Jolma et al.(2013)
Hoxd9_2
0.750 0.684
Hoxd9
M03284_2.00
Mus musculus
DTTWAYGRB

VYCRTWAAH
SELEX
Jolma et al.(2013)
Hoxd9_3
0.750 0.684
HOXC9
M05331_2.00
Homo sapiens
GTCGTAAAAN

NTTTTACGAC
SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_1
0.750 0.684
HOXC9
M05332_2.00
Homo sapiens
NTTTTATKRC

GYMATAAAAN
SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_2
0.750 0.684
HOXD9
M05104_2.00
Homo sapiens
NTTTTATKRC

GYMATAAAAN
SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_1
0.750 0.684
HOXD9
M05105_2.00
Homo sapiens
RTCRTAAAWN

NWTTTAYGAY
SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_2
0.750 0.684
HOXD9
M05108_2.00
Homo sapiens
RTCGTAAAWN

NWTTTACGAY
SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_1
0.750 0.684
HOXD9
M05109_2.00
Homo sapiens
NTTTTATKRC

GYMATAAAAN
SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_2
0.750 0.684
HOXC9
M09161_2.00
Homo sapiens
HTTWATKGCH

DGCMATWAAD
Misc
Kulakovskiy et al.(2013)
HXC9_HUMAN.H11MO.0.C
0.750 0.684
HOXD9
M10686_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXD9_Q2
0.750 0.684
HOXC9
M05333_2.00
Homo sapiens
RTCGTAAAHN

NDTTTACGAY
SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_1
0.750 0.684
HOXC9
M05334_2.00
Homo sapiens
NTTTWATKRC

GYMATWAAAN
SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_2
0.750 0.684
HOXD9
M05106_2.00
Homo sapiens
NNTTWATKRC

GYMATWAANN
SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_1
0.750 0.684
HOXD9
M05107_2.00
Homo sapiens
RTCGTAAANN

NNTTTACGAY
SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_2
0.750 0.684
HOXD9
M05110_2.00
Homo sapiens
RTCGTAAANN

NNTTTACGAY
SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_1
0.750 0.684
HOXD9
M05111_2.00
Homo sapiens
NDTTWATKRC

GYMATWAAHN
SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_2
0.750 0.684
Hoxb9
M00410_2.00
Mus musculus
NTTWAYDDNN

NNHHRTWAAN
PBM
Berger et al.(2008)
Hoxb9_3413
0.750 0.667
Hoxa9
M00475_2.00
Mus musculus
NNDDBNNN

NNNVHHNN
PBM
Berger et al.(2008)
Hoxa9_2622
0.750 0.667
HOXA9
M03085_2.00
Homo sapiens
NNDTTWAYGAYN

NRTCRTWAAHNN
SELEX
Jolma et al.(2013)
HOXA10_1
0.750 0.667
HOXA9
M03086_2.00
Homo sapiens
NDTTWATKRYN

NRYMATWAAHN
SELEX
Jolma et al.(2013)
HOXA10_2
0.750 0.667
HOXA9
M04932_2.00
Homo sapiens
NNDWWABKRC

GYMVTWWHNN
SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_1
0.750 0.667
HOXA9
M04933_2.00
Homo sapiens
NNDTWAYGRB

VYCRTWAHNN
SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_2
0.750 0.667
HOXB9
M05289_2.00
Homo sapiens
RTCRTAAAWN

NWTTTAYGAY
SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_1
0.750 0.667
HOXB9
M05290_2.00
Homo sapiens
NTTTWATKRC

GYMATWAAAN
SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_2
0.750 0.667
Hoxa9
M08138_2.00
Mus musculus
TGATTKATKRB

VYMATMAATCA
ChIP-seq
Mathelier et al.(2014)
MA0594.1
0.750 0.667
HOXA9
M09130_2.00
Homo sapiens
DCATAAAYYRBH

DVYRRTTTATGH
Misc
Kulakovskiy et al.(2013)
HXA10_HUMAN.H11MO.0.C
0.750 0.667
HOXA9
M09131_2.00
Homo sapiens
HHATAAATCAH

DTGATTTATDD
Misc
Kulakovskiy et al.(2013)
HXA9_HUMAN.H11MO.0.B
0.750 0.667
Hoxa9
M09203_2.00
Mus musculus
HHATAAATCAH

DTGATTTATDD
Misc
Kulakovskiy et al.(2013)
HXA9_MOUSE.H11MO.0.B
0.750 0.667
Hoxa9
M09575_2.00
Mus musculus
WGATTKATDRBY

RVYHATMAATCW
Misc
Heinz et al.(2010)
HSC-Hoxa9_GSE33509
0.750 0.667
HOXA9
M10642_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA10_Q6
0.750 0.667
HOXA9
M10643_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA9_04
0.750 0.667
HOXA9
M10644_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA9_Q5_01
0.750 0.667
HOXA9
M10645_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA9_Q5
0.750 0.667
HOXB9
M05291_2.00
Homo sapiens
GTCGTAAAHB

VDTTTACGAC
SELEX
Yin et al.(2017)
HOXB9_eDBD_Methyl-HT-SELEX
0.750 0.667
HOXA9
M04934_2.00
Homo sapiens
NNDTWAYKRC

GYMRTWAHNN
SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_1
0.750 0.667
HOXA9
M04935_2.00
Homo sapiens
NNDTWACGAY

RTCGTWAHNN
SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_2
0.750 0.667
Hoxc9
M00470_2.00
Mus musculus
NGTAATWAAN

NTTWATTACN
PBM
Berger et al.(2008)
Hoxc9_2367
0.742 0.667
Hoxc9
M08137_2.00
Mus musculus
NWGATTTATDGSH

DSCHATAAATCWN
ChIP-seq
Mathelier et al.(2014)
MA0485.1
0.742 0.667
Hoxc9
M09574_2.00
Mus musculus
TGATTTATDGCH

DGCHATAAATCA
Misc
Heinz et al.(2010)
Ainv15-Hoxc9_GSE21812
0.742 0.667
Hoxd12_CONSTRUCT
M00538_2.00
PBM CONSTRUCTS
NWTWAYNDBN

NVHNRTWAWN
PBM
Berger et al.(2008)
Hoxd12_3481
0.651 0.667
HOXD12
M03206_2.00
Homo sapiens
SYAATAAAA

TTTTATTRS
SELEX
Jolma et al.(2013)
HOXD12_1
0.651 0.667
HOXD12
M03207_2.00
Homo sapiens
RVTCGTAAAAH

DTTTTACGABY
SELEX
Jolma et al.(2013)
HOXD12_2
0.651 0.667
HOXD12
M03208_2.00
Homo sapiens
NRTCGTAAAHN

NDTTTACGAYN
SELEX
Jolma et al.(2013)
HOXD12_3
0.651 0.667
HOXD12
M03209_2.00
Homo sapiens
DTTWATYRC

GYRATWAAH
SELEX
Jolma et al.(2013)
HOXD12_4
0.651 0.667
HOXD12
M05279_2.00
Homo sapiens
NKTWACGAYN

NRTCGTWAMN
SELEX
Yin et al.(2017)
HOXD12_eDBD_HT-SELEX
0.651 0.667
HOXD12
M05280_2.00
Homo sapiens
NRTCGTAAAH

DTTTACGAYN
SELEX
Yin et al.(2017)
HOXD12_eDBD_Methyl-HT-SELEX
0.651 0.667
Abd-B
M00554_2.00
Drosophila melanogaster
NWTWAYDDNN

NNHHRTWAWN
PBM
Busser et al.(2012a)
Abd-B
0.624 0.667
Abd-B
M03772_2.00
Drosophila melanogaster
DRTCRTAAAWH

DWTTTAYGAYH
SELEX
Nitta et al.(2015)
Abd-B_1
0.624 0.667
Abd-B
M03773_2.00
Drosophila melanogaster
DTTTTATKRCY

RGYMATAAAAH
SELEX
Nitta et al.(2015)
Abd-B_2
0.624 0.667
Abd-B
M03774_2.00
Drosophila melanogaster
NKCARYAACGACYW

WRGTCGTTRYTGMN
SELEX
Nitta et al.(2015)
Abd-B_3
0.624 0.667
Abd-B
M03775_2.00
Drosophila melanogaster
DTTTWATGKSTTTY

RAAASMCATWAAAH
SELEX
Nitta et al.(2015)
Abd-B_4
0.624 0.667
Abd-B
M06476_2.00
Drosophila melanogaster
TTTATKR

YMATAAA
B1H
Mathelier et al.(2014)
MA0165.1
0.624 0.667
Abd-B
M06211_2.00
Drosophila melanogaster
YCATAAAA

TTTTATGR
B1H
Zhu et al.(2011)
Abd-B_FlyReg_FBgn0000015
0.624 0.667
Abd-B
M09672_2.00
Drosophila melanogaster
YMATAAAAHH

DDTTTTATKR
Misc
Kulakovskiy et al.(2009)
Abd-B
0.624 0.667
Abd-B
M10779_2.00
Drosophila melanogaster
VSNTTDATKRCNNN

NNNGYMATHAANSB
Transfac
Matys et al.(2006)
I$ABDB_01
0.624 0.667
Abd-B
M10780_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$ABDB_Q6
0.624 0.667
HXD12_HETFR
M02196_2.00
Heterodontus francisci
TTWATKRC

GYMATWAA
PBM
Weirauch et al.(2014)
pTH6533
0.618 0.649
Hoxc12
M00508_2.00
Mus musculus
NDTWAYNDBN

NVHNRTWAHN
PBM
Berger et al.(2008)
Hoxc12_3480
0.606 0.596
HOXC12
M03135_2.00
Homo sapiens
TTTTATTRY

RYAATAAAA
SELEX
Jolma et al.(2013)
HOXC12_1
0.606 0.596
HOXC12
M03136_2.00
Homo sapiens
RRTCGTAAAAH

DTTTTACGAYY
SELEX
Jolma et al.(2013)
HOXC12_2
0.606 0.596
HOXC12
M05083_2.00
Homo sapiens
NGYAATAAAAN

NTTTTATTRCN
SELEX
Yin et al.(2017)
HOXC12_eDBD_HT-SELEX_1
0.606 0.596
HOXC12
M05084_2.00
Homo sapiens
VRTCGTAAAHN

NDTTTACGAYB
SELEX
Yin et al.(2017)
HOXC12_eDBD_HT-SELEX_2
0.606 0.596
HOXC12
M05085_2.00
Homo sapiens
NGYAATAAAAH

DTTTTATTRCN
SELEX
Yin et al.(2017)
HOXC12_eDBD_Methyl-HT-SELEX_1
0.606 0.596
HOXC12
M05086_2.00
Homo sapiens
NRTCGTAAAHH

DDTTTACGAYN
SELEX
Yin et al.(2017)
HOXC12_eDBD_Methyl-HT-SELEX_2
0.606 0.596
CBG23031
M01245_2.00
Caenorhabditis briggsae
NTTWATKRNN

NNYMATWAAN
PBM
Lambert et al.(2019)
pTH11458
0.599 0.526
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000019611 Homeodomain 244 300

Links

Other Homeodomain family TFs
Other Bos taurus TFs

901 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
mab-3 Caenorhabditis elegans WBGene00003100 D 0.000
HPLM_0001799301 Haemonchus placei HPLM_0001799301 I 0.000
SMUV_0000808801 Syphacia muris SMUV_0000808801 I 0.000
ANCCAN_20966 Ancylostoma caninum ANCCAN_20966 I 0.000
DME_0000089401 Dracunculus medinensis DME_0000089401 I 0.000
TELCIR_03315 Teladorsagia circumcincta TELCIR_03315 I 0.000
CRE05176 Caenorhabditis remanei CRE05176 I 0.000
CJA05174 Caenorhabditis japonica CJA05174 I 0.000
CBG01045 Caenorhabditis briggsae CBG01045 I 0.000
L893_g18186 Steinernema glaseri L893_g18186 N 0.000
L898_g139 Steinernema monticolum L898_g139 N 0.000
nDi.2.2.2.g08383 Dirofilaria immitis nDi.2.2.2.g08383 N 0.000
TCLT_0000932101 Thelazia callipaeda TCLT_0000932101 N 0.000
TCNE_0001371701 Toxocara canis TCNE_0001371701 N 0.000
Bm6751 Brugia malayi Bm6751 N 0.000
L596_g3695 Steinernema carpocapsae L596_g3695 N 0.000
BXY_1758300 Bursaphelenchus xylophilus BXY_1758300 N 0.000
BTMF_0000069401 Brugia timori BTMF_0000069401 N 0.000
ASU_12809 Ascaris suum ASU_12809 N 0.000
ANCCEY_06946 Ancylostoma ceylanicum ANCCEY_06946 N 0.000
ALUE_0001936401 Ascaris lumbricoides ALUE_0001936401 N 0.000
ACAC_0000218001 Angiostrongylus cantonensis ACAC_0000218001 N 0.000
WBGene00246765 Onchocerca volvulus WBGene00246765 N 0.000
TELCIR_18692 Teladorsagia circumcincta TELCIR_18692 N 0.000