LHX3 (Canis familiaris)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSCAFG00000019695 T207686_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.744 0.391
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.744 0.391
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.744 0.391
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.744 0.391
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.744 0.391
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.744 0.391
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.744 0.391
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.744 0.391
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.744 0.391
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.717 0.261
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.717 0.261
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.717 0.261
Lhx3
M00435_2.00 		Mus musculus
NNNYAATHW
WDATTRNNN		 PBM
Berger et al.(2008)
Lhx3_3431 		0.377 1.000
Lhx3
M02687_2.00 		Mus musculus
VRWTAATTAATTW
WAATTAATTAWYB		 SELEX
Mathelier et al.(2014)
MA0135.1 		0.377 1.000
LHX3
M09137_2.00 		Homo sapiens
NYTAATTAAWTHH
DDAWTTAATTARN		 Misc
Kulakovskiy et al.(2013)
LHX3_HUMAN.H11MO.0.C 		0.377 1.000
Lhx3
M09188_2.00 		Mus musculus
NYTRATKRV
BYMATYARN		 Misc
Kulakovskiy et al.(2013)
LHX3_MOUSE.H11MO.0.C 		0.377 1.000
Lhx3
M09570_2.00 		Mus musculus
NNBTAATTAV
BTAATTAVNN		 Misc
Heinz et al.(2010)
Neuron-Lhx3_GSE31456 		0.377 1.000
LHX3
M10657_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LHX3A_01 		0.377 1.000
LHX3
M10658_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LHX3b_01 		0.377 1.000
LHX3
M10659_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LHX3_Q3 		0.377 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000018765 Homeodomain 163 208
ENSCAFP00000029148 Homeodomain 163 208

Links

Other Homeodomain family TFs
Other Canis familiaris TFs

Invalid Input OrderBy

1239 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action