CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCHOG00000004334
(
Choloepus hoffmanni
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSCHOG00000004334
T207754_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN
NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.696
0.279
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN
NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.696
0.279
VSX1
M04941_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.696
0.279
VSX1
M04944_2.00
Homo sapiens
NTAATTRS
SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.696
0.279
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN
NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.696
0.279
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN
NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.696
0.279
VSX1
M04943_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.696
0.279
VSX1
M04945_2.00
Homo sapiens
NTAATTRG
CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.696
0.279
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.696
0.279
VAX1
M03168_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.694
0.419
VAX1
M05182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.694
0.419
VAX1
M05183_2.00
Homo sapiens
BTMATKRN
NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.694
0.419
Dlx2
M00423_2.00
Mus musculus
NTAATNDNN
NNHNATTAN
PBM
Berger et al.(2008)
Dlx2_2273
0.326
1.000
Dlx5
M00449_2.00
Mus musculus
WRATNDN
NHNATYW
PBM
Berger et al.(2008)
Dlx5_3419
0.326
1.000
DLX2
M03118_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
DLX2_1
0.326
1.000
DLX5
M03095_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
DLX5_1
0.326
1.000
Dlx2
M03254_2.00
Mus musculus
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
Dlx2_1
0.326
1.000
DLX2
M05026_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX2_eDBD_HT-SELEX
0.326
1.000
DLX2
M05028_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX2_FL_HT-SELEX
0.326
1.000
DLX5
M04953_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX5_eDBD_HT-SELEX
0.326
1.000
DLX5
M04956_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX5_FL_HT-SELEX
0.326
1.000
Dlx5
M09195_2.00
Mus musculus
WAATTRYWKBB
VVMWRYAATTW
Misc
Kulakovskiy et al.(2013)
DLX5_MOUSE.H11MO.0.C
0.326
1.000
DLX2
M10674_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DLX2_Q6
0.326
1.000
DLX5
M10650_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DLX5_Q3
0.326
1.000
DLX2
M05027_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX2_eDBD_Methyl-HT-SELEX
0.326
1.000
DLX2
M05029_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX2_FL_Methyl-HT-SELEX
0.326
1.000
DLX5
M04954_2.00
Homo sapiens
NTAAYDAB
VTHRTTAN
SELEX
Yin et al.(2017)
DLX5_eDBD_Methyl-HT-SELEX_1
0.326
1.000
DLX5
M04955_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX5_eDBD_Methyl-HT-SELEX_2
0.326
1.000
DLX5
M04957_2.00
Homo sapiens
NTAAYGHB
VDCRTTAN
SELEX
Yin et al.(2017)
DLX5_FL_Methyl-HT-SELEX_1
0.326
1.000
DLX5
M04958_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX5_FL_Methyl-HT-SELEX_2
0.326
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCHOP00000003831
Homeodomain
137
179
RKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQ
Links
Other
Homeodomain
family TFs
Other
Choloepus hoffmanni
TFs
1249 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy