CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCJAG00000018567
(
Callithrix jacchus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSCJAG00000018567
T208020_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DPRX
M03237_2.00
Homo sapiens
NHTAATCYNN
NNRGATTADN
SELEX
Jolma et al.(2013)
DPRX_1
0.636
0.696
DPRX
M03238_2.00
Homo sapiens
NRGMTAATCYN
NRGATTAKCYN
SELEX
Jolma et al.(2013)
DPRX_2
0.636
0.696
DPRX
M05388_2.00
Homo sapiens
VGMTAATCYN
NRGATTAKCB
SELEX
Yin et al.(2017)
DPRX_eDBD_HT-SELEX
0.645
0.714
DPRX
M05389_2.00
Homo sapiens
AGATMATCYN
NRGATKATCT
SELEX
Yin et al.(2017)
DPRX_eDBD_Methyl-HT-SELEX
0.645
0.714
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000033951
Homeodomain
16
71
SNRRTMFTGQQPKDLNILFDENPYPNSSLQKMASKINAPPTVLQVWFKNCRAQLKK
ENSCJAP00000034452
Homeodomain
16
71
SQKRTMFTGQQPKDLNILFDENPYPNSSLQKMASKINAPPTVLQVWFKNCRAQLKK
Links
Other
Homeodomain
family TFs
Other
Callithrix jacchus
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy