LHX5 (Cavia porcellus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSCPOG00000023977 T208204_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Lhx1
M00405_2.00 		Mus musculus
TRATDRNNN
NNNYHATYA		 PBM
Berger et al.(2008)
Lhx1_2240 		0.658 0.691
Lhx5
M00445_2.00 		Mus musculus
TAATKRNNN
NNNYMATTA		 PBM
Berger et al.(2008)
Lhx5_2279 		0.658 0.691
LHX1
M05410_2.00 		Homo sapiens
NTRATBRN
NYVATYAN		 SELEX
Yin et al.(2017)
LHX1_eDBD_HT-SELEX 		0.658 0.691
LHX5
M04936_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
LHX5_FL_HT-SELEX 		0.658 0.691
LHX1
M05411_2.00 		Homo sapiens
NHRAYGHN
NDCRTYDN		 SELEX
Yin et al.(2017)
LHX1_eDBD_Methyl-HT-SELEX 		0.658 0.691
LHX5
M04937_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
LHX5_FL_Methyl-HT-SELEX_1 		0.658 0.691
LHX5
M04938_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
LHX5_FL_Methyl-HT-SELEX_2 		0.658 0.691
Lim1
M03853_2.00 		Drosophila melanogaster
NTAATTRN
NYAATTAN		 SELEX
Nitta et al.(2015)
Lim1_1 		0.643 0.618
Lim1
M06529_2.00 		Drosophila melanogaster
TTAATTA
TAATTAA		 B1H
Mathelier et al.(2014)
MA0194.1 		0.643 0.618
Lim1
M06332_2.00 		Drosophila melanogaster
TTAATTA
TAATTAA		 B1H
Zhu et al.(2011)
Lim1_Cell_FBgn0026411 		0.643 0.618
Lim1
M06333_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
Lim1_SOLEXA_FBgn0026411 		0.643 0.618
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000014441 Homeodomain 180 234

Links

Other Homeodomain family TFs
Other Cavia porcellus TFs

261 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
tetur02g00810 Tetranychus urticae tetur02g00810 I 0.667
TriadG30033 Trichoplax adhaerens TriadG30033 I 0.662
ENSPPYG00000008214 Pongo abelii ENSPPYG00000008214 I 0.658
ENSPSIG00000005953 Pelodiscus sinensis ENSPSIG00000005953 I 0.658
ENSPPYG00000004992 Pongo abelii ENSPPYG00000004992 I 0.658
ENSPSIG00000016729 Pelodiscus sinensis ENSPSIG00000016729 I 0.658
ENSPFOG00000019290 Poecilia formosa ENSPFOG00000019290 I 0.658
ENSPFOG00000016138 Poecilia formosa ENSPFOG00000016138 I 0.658
ENSPMAG00000008904 Petromyzon marinus ENSPMAG00000008904 I 0.658
LHX5 Pan troglodytes ENSPTRG00000005493 I 0.658
ENSSHAG00000010404 Sarcophilus harrisii ENSSHAG00000010404 I 0.658
LHX5 Sus scrofa ENSSSCG00000009869 I 0.658
ENSSTOG00000021620 Ictidomys tridecemlineatus ENSSTOG00000021620 I 0.658
Lhx1 Rattus norvegicus ENSRNOG00000002812 I 0.658
Lhx5 Rattus norvegicus ENSRNOG00000001392 I 0.658
LHX1 Pan troglodytes ENSPTRG00000009050 I 0.658
LHX1 Pteropus vampyrus ENSPVAG00000015637 I 0.658
LHX5 Procavia capensis ENSPCAG00000010694 I 0.658
LHX1 Procavia capensis ENSPCAG00000006272 I 0.658
ENSNLEG00000000189 Nomascus leucogenys ENSNLEG00000000189 I 0.658
ENSOANG00000014248 Ornithorhynchus anatinus ENSOANG00000014248 I 0.658
ENSOARG00000000046 Ovis aries ENSOARG00000000046 I 0.658
Lhx5 Mus musculus ENSMUSG00000029595 D 0.658
Lhx1 Mus musculus ENSMUSG00000018698 D 0.658
ENSMODG00000027538 Monodelphis domestica ENSMODG00000027538 I 0.658
ENSMPUG00000002688 Mustela putorius furo ENSMPUG00000002688 I 0.658
ENSMPUG00000015060 Mustela putorius furo ENSMPUG00000015060 I 0.658
LHX5 Oryctolagus cuniculus ENSOCUG00000009321 I 0.658
LHX1 Oryctolagus cuniculus ENSOCUG00000024664 I 0.658
lhx1b Oryzias latipes ENSORLG00000009889 I 0.658
ENSPANG00000019666 Papio anubis ENSPANG00000019666 I 0.658
ENSPANG00000022127 Papio anubis ENSPANG00000022127 I 0.658
ENSONIG00000010444 Oreochromis niloticus ENSONIG00000010444 I 0.658
ENSONIG00000001948 Oreochromis niloticus ENSONIG00000001948 I 0.658
LHX5 Otolemur garnettii ENSOGAG00000003519 I 0.658
LHX1 Otolemur garnettii ENSOGAG00000013789 I 0.658
ENSSTOG00000022593 Ictidomys tridecemlineatus ENSSTOG00000022593 I 0.658
lhx1b Tetraodon nigroviridis ENSTNIG00000010763 I 0.658
Sakowv30042332m.g Saccoglossus kowalevskii Sakowv30042332m.g I 0.658
lhx1 Xenopus tropicalis XB-GENE-482482 I 0.658
lhx5 Xenopus tropicalis XB-GENE-490400 I 0.658
Pvit_16426 Pogona vitticeps Pvit_16426 I 0.658
Pvit_13537 Pogona vitticeps Pvit_13537 I 0.658
ENSP00000261731 Macaca fascicularis ENSP00000261731 I 0.658
Myotis_brandtii_LHX1_10031028 Myotis brandtii Myotis_brandtii_LHX1_10031028 I 0.658
lhx1.L Xenopus laevis XB-GENE-856460 I 0.658
lhx5.S Xenopus laevis XB-GENE-865965 I 0.658
L889_g11280 Steinernema feltiae L889_g11280 I 0.658
L893_g28960 Steinernema glaseri L893_g28960 I 0.658
L892_g25025 Steinernema scapterisci L892_g25025 I 0.658
L596_g10853 Steinernema carpocapsae L596_g10853 I 0.658
D918_09140 Trichuris suis D918_09140 I 0.658
csin108499 Clonorchis sinensis csin108499 I 0.658
L898_g6794 Steinernema monticolum L898_g6794 I 0.658
ENSP00000254457-D1 Bos grunniens ENSP00000254457-D1 I 0.658
ENSMMUP00000034710 Macaca fascicularis ENSMMUP00000034710 I 0.658
LHX1 Tursiops truncatus ENSTTRG00000008900 I 0.658
ENSXMAG00000000565 Xiphophorus maculatus ENSXMAG00000000565 I 0.658
ENSXMAG00000005342 Xiphophorus maculatus ENSXMAG00000005342 I 0.658
lhx1b Takifugu rubripes ENSTRUG00000010398 I 0.658
lhx1a Takifugu rubripes ENSTRUG00000000174 I 0.658
ENSMMUG00000021668 Macaca mulatta ENSMMUG00000021668 I 0.658
lhx1a Tetraodon nigroviridis ENSTNIG00000014399 I 0.658
HelroG67495 Helobdella robusta HelroG67495 I 0.658
HelroG70524 Helobdella robusta HelroG70524 I 0.658
Cmyd_10020021 Chelonia mydas Cmyd_10020021 I 0.658
ENSBTAP00000004042-D1 Bos grunniens ENSBTAP00000004042-D1 I 0.658
lin-11 Caenorhabditis elegans WBGene00003000 I 0.658
SPU_006991 Strongylocentrotus purpuratus SPU_006991 I 0.658
NEMVEDRAFT_v1g109857 Nematostella vectensis NEMVEDRAFT_v1g109857 I 0.658
SMAR007885 Strigamia maritima SMAR007885 I 0.658
LHX5 Tupaia belangeri ENSTBEG00000003770 I 0.658
LHX1 Sus scrofa ENSSSCG00000017692 I 0.658
lhx1a Danio rerio ENSDARG00000014018 I 0.658
TMUE_s0059000100 Trichuris muris TMUE_s0059000100 I 0.658
lhx1b Danio rerio ENSDARG00000007944 I 0.658
ENSCSAG00000006059 Chlorocebus sabaeus ENSCSAG00000006059 I 0.658
LHX1 Cavia porcellus ENSCPOG00000027154 I 0.658
ENSCSAG00000002361 Chlorocebus sabaeus ENSCSAG00000002361 I 0.658
ENSMMUG00000001577 Macaca mulatta ENSMMUG00000001577 I 0.658
LHX1 Dasypus novemcinctus ENSDNOG00000036189 I 0.658
LHX5 Equus caballus ENSECAG00000016915 I 0.658
LHX1 Erinaceus europaeus ENSEEUG00000002834 I 0.658
LHX1 Equus caballus ENSECAG00000001597 I 0.658
Lhx1 Dipodomys ordii ENSDORG00000006956 I 0.658
Lhx5 Dipodomys ordii ENSDORG00000002125 I 0.658
LHX1 Callithrix jacchus ENSCJAG00000015458 I 0.658
LHX5 Callithrix jacchus ENSCJAG00000009813 I 0.658
LHX1 Choloepus hoffmanni ENSCHOG00000007567 I 0.658
ENSAMEG00000008592 Ailuropoda melanoleuca ENSAMEG00000008592 I 0.658
LHX1 Canis familiaris ENSCAFG00000017853 I 0.658
LHX5 Bos taurus ENSBTAG00000003107 I 0.658
LHX1 Bos taurus ENSBTAG00000033562 I 0.658
LHX5 Canis familiaris ENSCAFG00000009121 I 0.658
ENSAMEG00000008305 Ailuropoda melanoleuca ENSAMEG00000008305 I 0.658
CBG12236 Caenorhabditis briggsae CBG12236 I 0.658
CRE23969 Caenorhabditis remanei CRE23969 I 0.658
CGI_10025343 Crassostrea gigas CGI_10025343 I 0.658
EFV52646 Trichinella spiralis EFV52646 I 0.658
LHX1 Anolis carolinensis ENSACAG00000002508 I 0.658
ENSACAG00000005037 Anolis carolinensis ENSACAG00000005037 I 0.658
LHX1 Echinops telfairi ENSETEG00000003513 I 0.658
LHX5 Dasypus novemcinctus ENSDNOG00000010448 I 0.658
ENSLACG00000004119 Latimeria chalumnae ENSLACG00000004119 I 0.658
ENSLACG00000018094 Latimeria chalumnae ENSLACG00000018094 I 0.658
ENSGMOG00000002984 Gadus morhua ENSGMOG00000002984 I 0.658
ENSGMOG00000001730 Gadus morhua ENSGMOG00000001730 I 0.658
LHX1 Gorilla gorilla ENSGGOG00000002703 I 0.658
LHX5 Echinops telfairi ENSETEG00000006405 I 0.658
LHX1 Loxodonta africana ENSLAFG00000006400 I 0.658
LHX5 Loxodonta africana ENSLAFG00000015121 I 0.658
LHX5 Myotis lucifugus ENSMLUG00000009388 I 0.658
LHX1 Myotis lucifugus ENSMLUG00000014749 I 0.658
ENSMEUG00000006658 Macropus eugenii ENSMEUG00000006658 I 0.658
ENSLOCG00000008328 Lepisosteus oculatus ENSLOCG00000008328 I 0.658
ENSLOCG00000004960 Lepisosteus oculatus ENSLOCG00000004960 I 0.658
Lhx5 Gallus gallus ENSGALG00000008303 I 0.658
LHX5 Gorilla gorilla ENSGGOG00000010583 I 0.658
LHX5 Homo sapiens ENSG00000089116 D 0.658
LHX1 Gallus gallus ENSGALG00000005409 I 0.658
lhx1a Gasterosteus aculeatus ENSGACG00000013605 I 0.658
LHX1 Felis catus ENSFCAG00000005089 I 0.658
ENSFALG00000007758 Ficedula albicollis ENSFALG00000007758 I 0.658
CJA06348 Caenorhabditis japonica CJA06348 I 0.658
ENSFALG00000005291 Ficedula albicollis ENSFALG00000005291 I 0.658
lhx1b Gasterosteus aculeatus ENSGACG00000020307 I 0.658
LHX1 Homo sapiens ENSG00000273706 D 0.658
ENSONIG00000015427 Oreochromis niloticus ENSONIG00000015427 I 0.657
lhx5 Tetraodon nigroviridis ENSTNIG00000013489 I 0.657
Smp_129480 Schistosoma mansoni Smp_129480 I 0.657
LotgiG200317 Lottia gigantea LotgiG200317 I 0.657
lhx5 Oryzias latipes ENSORLG00000002044 I 0.657
ENSTRUG00000018387 Takifugu rubripes ENSTRUG00000018387 I 0.657
ENSAMXG00000014049 Astyanax mexicanus ENSAMXG00000014049 I 0.657
ENSXMAG00000001713 Xiphophorus maculatus ENSXMAG00000001713 I 0.657
lhx5 Danio rerio ENSDARG00000057936 I 0.657
SNAPOd2T00013613001 Oikopleura dioica SNAPOd2T00013613001 I 0.657
ENSPFOG00000000403 Poecilia formosa ENSPFOG00000000403 I 0.657
SMU15028938 Schmidtea mediterranea SMU15028938 I 0.656
BXY_0912200 Bursaphelenchus xylophilus BXY_0912200 I 0.654
ACAC_0000730801 Angiostrongylus cantonensis ACAC_0000730801 I 0.654
HCOI00212800 Haemonchus contortus HCOI00212800 I 0.654
ANCCEY_06432 Ancylostoma ceylanicum ANCCEY_06432 I 0.654
HPLM_0001274001 Haemonchus placei HPLM_0001274001 I 0.654
HelroG82362 Helobdella robusta HelroG82362 I 0.654
NECAME_15708 Necator americanus NECAME_15708 I 0.654
ENSCING00000019733 Ciona intestinalis ENSCING00000019733 I 0.653
scaffold673-EXSNAP2012.4 Pristionchus exspectatus scaffold673-EXSNAP2012.4 I 0.653
SSTP_0000140400 Strongyloides stercoralis SSTP_0000140400 I 0.653
SVE_0193100 Strongyloides venezuelensis SVE_0193100 I 0.653
ENSCSAVG00000004922 Ciona savignyi ENSCSAVG00000004922 I 0.653
PTRK_0001693100 Parastrongyloides trichosuri PTRK_0001693100 I 0.653
SPAL_0000919000 Strongyloides papillosus SPAL_0000919000 I 0.653
nRc.2.0.1.g11443 Romanomermis culicivorax nRc.2.0.1.g11443 I 0.653
SMU15040365 Schmidtea mediterranea SMU15040365 I 0.652
Bm7361 Brugia malayi Bm7361 I 0.652
nLs.2.1.2.g07276 Litomosoides sigmodontis nLs.2.1.2.g07276 I 0.652
nAv.1.0.1.g08091 Acanthocheilonema viteae nAv.1.0.1.g08091 I 0.652
TASK_0000529901 Taenia asiatica TASK_0000529901 I 0.652
Sjc_0087270 Schistosoma japonicum Sjc_0087270 I 0.652
TsM_000103200 Taenia solium TsM_000103200 I 0.652
LOAG_17805 Loa loa LOAG_17805 I 0.652
TCLT_0000662101 Thelazia callipaeda TCLT_0000662101 I 0.652
HmN_000673200 Hymenolepis microstoma HmN_000673200 I 0.652
SBAD_0000331701 Soboliphyme baturini SBAD_0000331701 I 0.652
ECANG7_06878 Echinococcus canadensis ECANG7_06878 I 0.652
EmuJ_001055700 Echinococcus multilocularis EmuJ_001055700 I 0.652
AAZ04406 Xenopus tropicalis AAZ04406 I 0.651
AAZ04407 Xenopus tropicalis AAZ04407 I 0.651
XP_002941181 Xenopus tropicalis XP_002941181 I 0.651
bix1.1 Xenopus tropicalis XB-GENE-482521 I 0.651
ANCCEY_13637 Ancylostoma ceylanicum ANCCEY_13637 I 0.648
ASU_11512 Ascaris suum ASU_11512 I 0.648
ANCDUO_03506 Ancylostoma duodenale ANCDUO_03506 I 0.648
ANCCAN_03960 Ancylostoma caninum ANCCAN_03960 I 0.648
BXY_0318900 Bursaphelenchus xylophilus BXY_0318900 I 0.648
Bm3122 Brugia malayi Bm3122 I 0.648
L596_g6959 Steinernema carpocapsae L596_g6959 I 0.648
ACAC_0000214601 Angiostrongylus cantonensis ACAC_0000214601 I 0.648
TELCIR_14008 Teladorsagia circumcincta TELCIR_14008 I 0.648
L889_g17065 Steinernema feltiae L889_g17065 I 0.648
L892_g13279 Steinernema scapterisci L892_g13279 I 0.648
HPLM_0001238001 Haemonchus placei HPLM_0001238001 I 0.648
HCOI00008800 Haemonchus contortus HCOI00008800 I 0.648
L898_g22226 Steinernema monticolum L898_g22226 I 0.648
CapteG168913 Capitella teleta CapteG168913 I 0.648
EEL_0000691601 Elaeophora elaphi EEL_0000691601 I 0.648
EVEC_0000982701 Enterobius vermicularis EVEC_0000982701 I 0.648
GPLIN_000449100 Globodera pallida GPLIN_000449100 I 0.648
TELCIR_02824 Teladorsagia circumcincta TELCIR_02824 I 0.648
nOo.2.0.1.g00707 Onchocerca ochengi nOo.2.0.1.g00707 I 0.648
LOAG_03791 Loa loa LOAG_03791 I 0.648
OFLC_0000121401 Onchocerca flexuosa OFLC_0000121401 I 0.648
OESDEN_04793 Oesophagostomum dentatum OESDEN_04793 I 0.648
nLs.2.1.2.g09747 Litomosoides sigmodontis nLs.2.1.2.g09747 I 0.648
mec-3 Caenorhabditis elegans WBGene00003167 I 0.648
NECAME_07550 Necator americanus NECAME_07550 I 0.648
PTRK_0000261900 Parastrongyloides trichosuri PTRK_0000261900 I 0.648
SMUV_0001041401 Syphacia muris SMUV_0001041401 I 0.648
L893_g19733 Steinernema glaseri L893_g19733 I 0.648
TCLT_0000225101 Thelazia callipaeda TCLT_0000225101 I 0.648
SVE_0285400 Strongyloides venezuelensis SVE_0285400 I 0.648
SSTP_0000085600 Strongyloides stercoralis SSTP_0000085600 I 0.648
WUBG_04132 Wuchereria bancrofti WUBG_04132 I 0.648
SPAL_0000433600 Strongyloides papillosus SPAL_0000433600 I 0.648
WBGene00239561 Onchocerca volvulus WBGene00239561 I 0.648
nDi.2.2.2.g07508 Dirofilaria immitis nDi.2.2.2.g07508 I 0.648
maker-nMf.1.1.scaf03207-snap-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf03207-snap-gene-0.13 I 0.648
CBG08386 Caenorhabditis briggsae CBG08386 I 0.648
Minc16608 Meloidogyne incognita Minc16608 I 0.648
MhA1_Contig1258.frz3.gene1 Meloidogyne hapla MhA1_Contig1258.frz3.gene1 I 0.648
CJA08021 Caenorhabditis japonica CJA08021 I 0.648
CBN12182 Caenorhabditis brenneri CBN12182 I 0.648
CRE10916 Caenorhabditis remanei CRE10916 I 0.648
nAv.1.0.1.g08462 Acanthocheilonema viteae nAv.1.0.1.g08462 I 0.648
NBR_0000986901 Nippostrongylus brasiliensis NBR_0000986901 I 0.648
CRE10917 Caenorhabditis remanei CRE10917 I 0.648
bix1.2.S Xenopus laevis XB-GENE-6252895 I 0.646
bix1.3.S Xenopus laevis XB-GENE-6252030 I 0.646
bix1.1.L Xenopus laevis XB-GENE-6252894 I 0.646
bix1.3.L Xenopus laevis XB-GENE-6485514 I 0.646
GI15570 Drosophila mojavensis FBgn0138319 I 0.643
ML132520a Mnemiopsis leidyi ML132520a I 0.643
Lim1 Drosophila melanogaster FBgn0026411 D 0.643
NV17551 Nasonia vitripennis NV17551 I 0.643
PHUM255020 Pediculus humanus PHUM255020 I 0.643
L798_01109 Zootermopsis nevadensis L798_01109 I 0.643
GA10943 Drosophila pseudoobscura FBgn0070999 I 0.643
GH24084 Drosophila grimshawi FBgn0131540 I 0.643
GG19023 Drosophila erecta FBgn0111229 I 0.643
GF19125 Drosophila ananassae FBgn0096136 I 0.643
GB55663 Apis mellifera GB55663 I 0.643
GK16904 Drosophila willistoni FBgn0218903 I 0.643
GE17432 Drosophila yakuba FBgn0234899 I 0.643
AGAP011134 Anopheles gambiae AGAP011134 I 0.643
MDOA005664 Musca domestica MDOA005664 I 0.643
ACYPI000398 Acyrthosiphon pisum ACYPI000398 I 0.643
ACEP18723 Atta cephalotes ACEP18723 I 0.643
DAPPUDRAFT_11288 Daphnia pulex DAPPUDRAFT_11288 I 0.643
Hsal_05578--XP_394135.2_APIME Harpegnathos saltator Hsal_05578--XP_394135.2_APIME I 0.643
TC014939 Tribolium castaneum TC014939 I 0.643
YQE_11738 Dendroctonus ponderosae YQE_11738 I 0.643
Cflo_02985--XP_394135.2_APIME Camponotus floridanus Cflo_02985--XP_394135.2_APIME I 0.643
GJ15180 Drosophila virilis FBgn0202376 I 0.643
LHX1 Tupaia belangeri ENSTBEG00000007734 I 0.642
SPU_015828 Strongylocentrotus purpuratus SPU_015828 I 0.641
RSKR_0000900000 Rhabditophanes kr3021 RSKR_0000900000 I 0.637
NEMVEDRAFT_v1g69041 Nematostella vectensis NEMVEDRAFT_v1g69041 I 0.637
ENSNLEG00000002343 Nomascus leucogenys ENSNLEG00000002343 I 0.636
RSKR_0000914800 Rhabditophanes kr3021 RSKR_0000914800 I 0.635
ENSFALG00000004733 Ficedula albicollis ENSFALG00000004733 I 0.634
RSKR_0000962500 Rhabditophanes kr3021 RSKR_0000962500 I 0.627
XP_002155267.1 Hydra magnipapillata XP_002155267.1 I 0.621
DME_0000440201 Dracunculus medinensis DME_0000440201 I 0.619
Ppa-mec-3 Pristionchus pacificus PPA21551 I 0.615
Pvit_18440 Pogona vitticeps Pvit_18440 I 0.608
HelroG66919 Helobdella robusta HelroG66919 I 0.607
RSKR_0000997100 Rhabditophanes kr3021 RSKR_0000997100 I 0.605
CapteG97456 Capitella teleta CapteG97456 I 0.603
L892_g21796 Steinernema scapterisci L892_g21796 I 0.601
D917_09256 Trichinella nativa D917_09256 I 0.358