TLX3 (Cavia porcellus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSCPOG00000024190 T208208_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TLX3
M05233_2.00
Homo sapiens
NAATKGNNNNNNNNNNNNNCAATTN

NAATTGNNNNNNNNNNNNNCMATTN
SELEX
Yin et al.(2017)
TLX3_eDBD_HT-SELEX
0.867 1.000
TLX3
M05235_2.00
Homo sapiens
NAATTGNNNNNHNNNNCAATTN

NAATTGNNNNDNNNNNCAATTN
SELEX
Yin et al.(2017)
TLX3_FL_HT-SELEX
0.867 1.000
TLX3
M05234_2.00
Homo sapiens
NAATTGNNNNNNNNNNDCAATTD

HAATTGHNNNNNNNNNNCAATTN
SELEX
Yin et al.(2017)
TLX3_eDBD_Methyl-HT-SELEX
0.867 1.000
TLX3
M05236_2.00
Homo sapiens
HAATTRNNNNNNNNNYHATTV

BAATDRNNNNNNNNNYAATTD
SELEX
Yin et al.(2017)
TLX3_FL_Methyl-HT-SELEX
0.867 1.000
TLX2
M02087_2.00
Homo sapiens
NYRDNNNNNN

NNNNNNHYRN
PBM
Weirauch et al.(2014)
pTH6482
0.806 0.877
Tlx2
M00526_2.00
Mus musculus
WTTAAWTA

TAWTTAAW
PBM
Berger et al.(2008)
Tlx2_3498
0.806 0.877
TLX2
M05020_2.00
Homo sapiens
BTAATTRN

NYAATTAV
SELEX
Yin et al.(2017)
TLX2_eDBD_HT-SELEX
0.806 0.877
TLX2
M10672_2.00
Homo sapiens
BNGTAAKDNB

VNHMTTACNV
Transfac
Matys et al.(2006)
V$NCX_01
0.806 0.877
TLX2
M05021_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
TLX2_eDBD_Methyl-HT-SELEX
0.806 0.877
C15
M06505_2.00
Drosophila melanogaster
TTAAWKR

YMWTTAA
B1H
Mathelier et al.(2014)
MA0170.1
0.804 0.877
C15
M06289_2.00
Drosophila melanogaster
BTTAAWKR

YMWTTAAV
B1H
Zhu et al.(2011)
C15_Cell_FBgn0004863
0.804 0.877
C15
M06290_2.00
Drosophila melanogaster
NWTAAWKR

YMWTTAWN
B1H
Zhu et al.(2011)
C15_SOLEXA_FBgn0004863
0.804 0.877
lms
M03863_2.00
Drosophila melanogaster
BTAATTRV

BYAATTAV
SELEX
Nitta et al.(2015)
CG13424_1
0.733 0.614
lms
M03864_2.00
Drosophila melanogaster
HTWATTRDWTDATTRR

YYAATHAWHYAATWAD
SELEX
Nitta et al.(2015)
lms_1
0.733 0.614
lms
M06536_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Mathelier et al.(2014)
MA0175.1
0.733 0.614
lms
M06347_2.00
Drosophila melanogaster
NYTAATKR

YMATTARN
B1H
Zhu et al.(2011)
CG13424_Cell_FBgn0034520
0.733 0.614
lms
M06348_2.00
Drosophila melanogaster
NNHTAATDRN

NYHATTADNN
B1H
Zhu et al.(2011)
CG13424_SOLEXA_2_FBgn0034520
0.733 0.614
lms
M06349_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Zhu et al.(2011)
CG13424_SOLEXA_FBgn0034520
0.733 0.614
NK7.1
M03847_2.00
Drosophila melanogaster
VTTAAAYGDTD

HAHCRTTTAAB
SELEX
Nitta et al.(2015)
NK7.1_1
0.726 0.579
NK7.1
M03848_2.00
Drosophila melanogaster
NSTTAATTGVY

RBCAATTAASN
SELEX
Nitta et al.(2015)
NK7.1_2
0.726 0.579
NK7.1
M06524_2.00
Drosophila melanogaster
TTAATDR

YHATTAA
B1H
Mathelier et al.(2014)
MA0196.1
0.726 0.579
NK7.1
M06323_2.00
Drosophila melanogaster
NTTAATDR

YHATTAAN
B1H
Zhu et al.(2011)
NK7.1_Cell_FBgn0024321
0.726 0.579
NK7.1
M06324_2.00
Drosophila melanogaster
YTAATDR

YHATTAR
B1H
Zhu et al.(2011)
NK7.1_SOLEXA_FBgn0024321
0.726 0.579
Barhl1
M00433_2.00
Mus musculus
NTAAWNRNN

NNYNWTTAN
PBM
Berger et al.(2008)
Barhl1_2590
0.716 0.579
Barhl1
M03258_2.00
Mus musculus
NNTAAWYGNH

DNCRWTTANN
SELEX
Jolma et al.(2013)
Barhl1_1
0.716 0.579
Barhl1
M03259_2.00
Mus musculus
NNTAADNRNN

NNYNHTTANN
SELEX
Jolma et al.(2013)
Barhl1_2
0.716 0.579
Barhl1
M03260_2.00
Mus musculus
TAAWYGNYNNTAAWYG

CRWTTANNRNCRWTTA
SELEX
Jolma et al.(2013)
Barhl1_3
0.716 0.579
BARHL1
M05091_2.00
Homo sapiens
NTAAWYGN

NCRWTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_1
0.716 0.579
BARHL1
M05092_2.00
Homo sapiens
NTAADBGN

NCVHTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_2
0.716 0.579
BARHL1
M05093_2.00
Homo sapiens
NTAADKGN

NCMHTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_Methyl-HT-SELEX
0.716 0.579
ENSTNIG00000006040
M02106_2.00
Tetraodon nigroviridis
NNNBTAAWHRBNN

NNVYDWTTAVNNN
PBM
Weirauch et al.(2014)
pTH6503
0.704 0.596
Barhl2
M00460_2.00
Mus musculus
NTAAWNRNN

NNYNWTTAN
PBM
Berger et al.(2008)
Barhl2_3868
0.704 0.579
BARHL2
M03157_2.00
Homo sapiens
NNTAAWYGNN

NNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_1
0.704 0.579
BARHL2
M03158_2.00
Homo sapiens
NNTAAWBGNN

NNCVWTTANN
SELEX
Jolma et al.(2013)
BARHL2_2
0.704 0.579
BARHL2
M03159_2.00
Homo sapiens
TAAWYGNNNNTAAWYR

YRWTTANNNNCRWTTA
SELEX
Jolma et al.(2013)
BARHL2_3
0.704 0.579
BARHL2
M03160_2.00
Homo sapiens
NNTAAWYGNH

DNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_4
0.704 0.579
BARHL2
M03161_2.00
Homo sapiens
NNTAAWYGNN

NNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_5
0.704 0.579
BARHL2
M03162_2.00
Homo sapiens
TAAWYGNYNHTAAWYG

CRWTTADNRNCRWTTA
SELEX
Jolma et al.(2013)
BARHL2_6
0.704 0.579
B-H1
M03829_2.00
Drosophila melanogaster
VNTAAWYGNN

NNCRWTTANB
SELEX
Nitta et al.(2015)
B-H1_1
0.704 0.579
B-H1
M03830_2.00
Drosophila melanogaster
SNTAADBGN

NCVHTTANS
SELEX
Nitta et al.(2015)
B-H1_2
0.704 0.579
BARHL2
M05164_2.00
Homo sapiens
HTAAAYGNY

RNCRTTTAD
SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_1
0.704 0.579
BARHL2
M05165_2.00
Homo sapiens
NTAAWTGNB

VNCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_2
0.704 0.579
BARHL2
M05167_2.00
Homo sapiens
NTAAWYGN

NCRWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_1
0.704 0.579
BARHL2
M05168_2.00
Homo sapiens
NTAAWYGN

NCRWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_2
0.704 0.579
B-H1
M06512_2.00
Drosophila melanogaster
HTAAWYG

CRWTTAD
B1H
Mathelier et al.(2014)
MA0168.1
0.704 0.579
BARHL2
M05166_2.00
Homo sapiens
NTAAWTGNB

VNCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_eDBD_Methyl-HT-SELEX
0.704 0.579
BARHL2
M05169_2.00
Homo sapiens
NTAAWTGN

NCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_Methyl-HT-SELEX
0.704 0.579
B-H2
M03810_2.00
Drosophila melanogaster
VNTAAAYGNH

DNCRTTTANB
SELEX
Nitta et al.(2015)
B-H2_1
0.704 0.561
B-H2
M03811_2.00
Drosophila melanogaster
SNTAADBGN

NCVHTTANS
SELEX
Nitta et al.(2015)
B-H2_2
0.704 0.561
B-H2
M06503_2.00
Drosophila melanogaster
WTAATTG

CAATTAW
B1H
Mathelier et al.(2014)
MA0169.1
0.704 0.561
ceh-5
M02179_2.00
Caenorhabditis elegans
NNTAATDDN

NHHATTANN
PBM
Weirauch et al.(2014)
pTH6562
0.673 0.509
Hmx2
M00507_2.00
Mus musculus
NHRANYGNNN

NNNCRNTYDN
PBM
Berger et al.(2008)
Hmx2_3424
0.670 0.614
HMX2
M03234_2.00
Homo sapiens
NNTTAAKTGNN

NNCAMTTAANN
SELEX
Jolma et al.(2013)
HMX2_1
0.670 0.614
HMX2
M05373_2.00
Homo sapiens
GNHRAKYGS

SCRMTYDNC
SELEX
Yin et al.(2017)
HMX2_eDBD_HT-SELEX
0.670 0.614
HMX2
M05375_2.00
Homo sapiens
NTTAAKTGNN

NNCAMTTAAN
SELEX
Yin et al.(2017)
HMX2_FL_HT-SELEX
0.670 0.614
HMX2
M05374_2.00
Homo sapiens
NNTAAKTGN

NCAMTTANN
SELEX
Yin et al.(2017)
HMX2_eDBD_Methyl-HT-SELEX
0.670 0.614
HMX2
M05376_2.00
Homo sapiens
NTTAAKTGNN

NNCAMTTAAN
SELEX
Yin et al.(2017)
HMX2_FL_Methyl-HT-SELEX
0.670 0.614
Emx2
M00495_2.00
Mus musculus
NTAATDDNN

NNHHATTAN
PBM
Berger et al.(2008)
Emx2_3420
0.666 0.526
EMX2
M03210_2.00
Homo sapiens
NBTAATTANN

NNTAATTAVN
SELEX
Jolma et al.(2013)
EMX2_1
0.666 0.526
EMX2
M03211_2.00
Homo sapiens
YMATTARBTAATKR

YMATTAVYTAATKR
SELEX
Jolma et al.(2013)
EMX2_2
0.666 0.526
EMX2
M05281_2.00
Homo sapiens
YTAATKAB

VTMATTAR
SELEX
Yin et al.(2017)
EMX2_eDBD_HT-SELEX
0.666 0.526
EMX2
M05282_2.00
Homo sapiens
YTAATKAN

NTMATTAR
SELEX
Yin et al.(2017)
EMX2_eDBD_Methyl-HT-SELEX
0.666 0.526
EMX1
M02088_2.00
Homo sapiens
NNTAATKANN

NNTMATTANN
PBM
Weirauch et al.(2014)
pTH5677
0.666 0.509
EMX1
M03151_2.00
Homo sapiens
NBTAATTRNN

NNYAATTAVN
SELEX
Jolma et al.(2013)
EMX1_1
0.666 0.509
EMX1
M03152_2.00
Homo sapiens
YMATTARYTAATKR

YMATTARYTAATKR
SELEX
Jolma et al.(2013)
EMX1_2
0.666 0.509
EMX1
M05145_2.00
Homo sapiens
BTAATTAN

NTAATTAV
SELEX
Yin et al.(2017)
EMX1_eDBD_HT-SELEX
0.666 0.509
EMX1
M05147_2.00
Homo sapiens
BTAATTAV

BTAATTAV
SELEX
Yin et al.(2017)
EMX1_FL_HT-SELEX
0.666 0.509
EMX1
M05146_2.00
Homo sapiens
BTAATTRN

NYAATTAV
SELEX
Yin et al.(2017)
EMX1_eDBD_Methyl-HT-SELEX
0.666 0.509
EMX1
M05148_2.00
Homo sapiens
BTAATTAN

NTAATTAV
SELEX
Yin et al.(2017)
EMX1_FL_Methyl-HT-SELEX
0.666 0.509
ems
M02114_2.00
Drosophila melanogaster
NTAATKRNB

VNYMATTAN
PBM
Weirauch et al.(2014)
pTH5673
0.654 0.509
E5
M03814_2.00
Drosophila melanogaster
STAATKNN

NNMATTAS
SELEX
Nitta et al.(2015)
E5_1
0.654 0.509
ems
M03789_2.00
Drosophila melanogaster
BTAATTAN

NTAATTAV
SELEX
Nitta et al.(2015)
ems_1
0.654 0.509
ems
M03790_2.00
Drosophila melanogaster
BTAATTAVBVBTAATKRN

NYMATTAVBVBTAATTAV
SELEX
Nitta et al.(2015)
ems_2
0.654 0.509
ems
M03791_2.00
Drosophila melanogaster
BTAATKRN

NYMATTAV
SELEX
Nitta et al.(2015)
ems_3
0.654 0.509
ems
M03792_2.00
Drosophila melanogaster
STAATKRSSSSTAATKRV

BYMATTASSSSYMATTAS
SELEX
Nitta et al.(2015)
ems_4
0.654 0.509
ems
M06484_2.00
Drosophila melanogaster
HTAATKR

YMATTAD
B1H
Mathelier et al.(2014)
MA0219.1
0.654 0.509
E5
M06507_2.00
Drosophila melanogaster
BTAATKA

TMATTAV
B1H
Mathelier et al.(2014)
MA0189.1
0.654 0.509
E5
M06293_2.00
Drosophila melanogaster
NBTAATKA

TMATTAVN
B1H
Zhu et al.(2011)
E5_Cell_FBgn0008646
0.654 0.509
E5
M06294_2.00
Drosophila melanogaster
NTAATDR

YHATTAN
B1H
Zhu et al.(2011)
E5_SOLEXA_FBgn0008646
0.654 0.509
ems
M06233_2.00
Drosophila melanogaster
WHTAATKR

YMATTADW
B1H
Zhu et al.(2011)
Ems_Cell_FBgn0000576
0.654 0.509
ems
M06234_2.00
Drosophila melanogaster
TSTMATHM

KDATKASA
B1H
Zhu et al.(2011)
ems_FlyReg_FBgn0000576
0.654 0.509
ems
M06235_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Zhu et al.(2011)
Ems_SOLEXA_FBgn0000576
0.654 0.509
ems
M09676_2.00
Drosophila melanogaster
WTWATGA

TCATWAW
Misc
Kulakovskiy et al.(2009)
ems
0.654 0.509
Hmx1
M00524_2.00
Mus musculus
NHDAKYRNNN

NNNYRMTHDN
PBM
Berger et al.(2008)
Hmx1_3423
0.652 0.614
HMX1
M03243_2.00
Homo sapiens
NNTTAAKTGNY

RNCAMTTAANN
SELEX
Jolma et al.(2013)
HMX1_1
0.652 0.614
HMX1
M05392_2.00
Homo sapiens
BNYAAKTGN

NCAMTTRNV
SELEX
Yin et al.(2017)
HMX1_eDBD_HT-SELEX
0.652 0.614
HMX1
M05393_2.00
Homo sapiens
VNYAAKTGB

VCAMTTRNB
SELEX
Yin et al.(2017)
HMX1_eDBD_Methyl-HT-SELEX
0.652 0.614
HMX3
M03233_2.00
Homo sapiens
NNNTAAKTGNN

NNCAMTTANNN
SELEX
Jolma et al.(2013)
HMX3_1
0.652 0.596
Hmx
M03882_2.00
Drosophila melanogaster
NYRAKYGN

NCRMTYRN
SELEX
Nitta et al.(2015)
Hmx_1
0.652 0.596
Hmx
M06554_2.00
Drosophila melanogaster
TTAATTG

CAATTAA
B1H
Mathelier et al.(2014)
MA0192.1
0.652 0.596
Hmx
M06386_2.00
Drosophila melanogaster
TTAATTG

CAATTAA
B1H
Zhu et al.(2011)
Hmx_Cell_FBgn0085448
0.652 0.596
Hmx
M06387_2.00
Drosophila melanogaster
TTAATTG

CAATTAA
B1H
Zhu et al.(2011)
Hmx_SOLEXA_FBgn0085448
0.652 0.596
HMX3
M10754_2.00
Homo sapiens
CAAGTGCGTG

CACGCACTTG
Transfac
Matys et al.(2006)
V$HMX1_01
0.652 0.596
VAX2
M00284_2.00
Homo sapiens
NNTAATND

HNATTANN
PBM
Barrera et al.(2016)
VAX2_REF
0.649 0.474
Vax1
M00398_2.00
Mus musculus
NTAATNDNN

NNHNATTAN
PBM
Berger et al.(2008)
Vax1_3499
0.649 0.474
Vax2
M00464_2.00
Mus musculus
NTAATDDNN

NNHHATTAN
PBM
Berger et al.(2008)
Vax2_3500
0.649 0.474
VAX2
M03119_2.00
Homo sapiens
YTAATKAN

NTMATTAR
SELEX
Jolma et al.(2013)
VAX2_1
0.649 0.474
VAX2
M05030_2.00
Homo sapiens
BTAATTRV

BYAATTAV
SELEX
Yin et al.(2017)
VAX2_FL_HT-SELEX
0.649 0.474
Vax1
M10764_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VAX1_04
0.649 0.474
VAX2
M05031_2.00
Homo sapiens
BTAATTRV

BYAATTAV
SELEX
Yin et al.(2017)
VAX2_FL_Methyl-HT-SELEX
0.649 0.474
VAX2
M00283_2.00
Homo sapiens
NNTAAWNDNN

NNHNWTTANN
PBM
Barrera et al.(2016)
VAX2_L139M
0.643 0.456
CG11085
M03857_2.00
Drosophila melanogaster
BTAAWYGN

NCRWTTAV
SELEX
Nitta et al.(2015)
CG11085_1
0.642 0.491
CG11085
M03858_2.00
Drosophila melanogaster
NTAAWCGN

NCGWTTAN
SELEX
Nitta et al.(2015)
CG11085_2
0.642 0.491
CG11085
M06532_2.00
Drosophila melanogaster
TTAATDG

CHATTAA
B1H
Mathelier et al.(2014)
MA0171.1
0.642 0.491
CG11085
M06339_2.00
Drosophila melanogaster
NTTAATDGV

BCHATTAAN
B1H
Zhu et al.(2011)
CG11085_Cell_FBgn0030408
0.642 0.491
CG11085
M06340_2.00
Drosophila melanogaster
NHTAAWBRNN

NNYVWTTADN
B1H
Zhu et al.(2011)
CG11085_SOLEXA_FBgn0030408
0.642 0.491
Hmx3_CONSTRUCT
M00537_2.00
PBM CONSTRUCTS
NHDADYRNN

NNYRHTHDN
PBM
Berger et al.(2008)
Hmx3_3490
0.639 0.579
Q24780_9CNID
M02205_2.00
Eleutheria dichotoma
NNYTAATTAMN

NKTAATTARNN
PBM
Weirauch et al.(2014)
pTH6308
0.639 0.509
MEOX2
M03103_2.00
Homo sapiens
NNTRATKASN

NSTMATYANN
SELEX
Jolma et al.(2013)
MEOX2_1
0.636 0.491
MEOX2
M03104_2.00
Homo sapiens
NTAATTANVNTAATTAV

BTAATTANBNTAATTAN
SELEX
Jolma et al.(2013)
MEOX2_2
0.636 0.491
MEOX2
M03105_2.00
Homo sapiens
HTAATGATGATKAN

NTMATCATCATTAD
SELEX
Jolma et al.(2013)
MEOX2_3
0.636 0.491
Meox2
M03271_2.00
Mus musculus
NTAATKAN

NTMATTAN
SELEX
Jolma et al.(2013)
Meox2_1
0.636 0.491
MEOX2
M04988_2.00
Homo sapiens
NTDAYGHB

VDCRTHAN
SELEX
Yin et al.(2017)
MEOX2_FL_HT-SELEX_1
0.636 0.491
MEOX2
M04989_2.00
Homo sapiens
NTVATBRV

BYVATBAN
SELEX
Yin et al.(2017)
MEOX2_FL_HT-SELEX_2
0.636 0.491
Meox2
M10771_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEOX2_05
0.636 0.491
MEOX2
M04990_2.00
Homo sapiens
NTAAYGHB

VDCRTTAN
SELEX
Yin et al.(2017)
MEOX2_FL_Methyl-HT-SELEX_1
0.636 0.491
MEOX2
M04991_2.00
Homo sapiens
NTVATKRN

NYMATBAN
SELEX
Yin et al.(2017)
MEOX2_FL_Methyl-HT-SELEX_2
0.636 0.491
Nkx1-1
M00442_2.00
Mus musculus
NNTAATNDNN

NNHNATTANN
PBM
Berger et al.(2008)
Nkx1-1_3856
0.629 0.491
Nkx1-2
M00503_2.00
Mus musculus
NNTAAWNDN

NHNWTTANN
PBM
Berger et al.(2008)
Nkx1-2_3214
0.629 0.491
slou
M00557_2.00
Drosophila melanogaster
NNTAATDRN

NYHATTANN
PBM
Busser et al.(2012a)
Slou
0.629 0.491
slou
M03798_2.00
Drosophila melanogaster
VBTAATTRSB

VSYAATTAVB
SELEX
Nitta et al.(2015)
slou_1
0.629 0.491
slou
M06494_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Mathelier et al.(2014)
MA0245.1
0.629 0.491
slou
M06262_2.00
Drosophila melanogaster
BYTAATKR

YMATTARV
B1H
Zhu et al.(2011)
Slou_Cell_FBgn0002941
0.629 0.491
slou
M06263_2.00
Drosophila melanogaster
HTAATKR

YMATTAD
B1H
Zhu et al.(2011)
Slou_SOLEXA_FBgn0002941
0.629 0.491
ventx1.1.L
M02234_2.00
Xenopus laevis
NNNNVBNNNN

NNNNVBNNNN
PBM
Weirauch et al.(2014)
pTH6162
0.622 0.509
ventx1.2.S
M10805_2.00
Xenopus laevis
RSRMAAATWBBVS

SBBBWATTTKYSY
Transfac
Matys et al.(2006)
V$XVENT1_01
0.622 0.509
lbe
M03822_2.00
Drosophila melanogaster
TAACRABV

BVTYGTTA
SELEX
Nitta et al.(2015)
lbe_1
0.621 0.579
lbe
M03823_2.00
Drosophila melanogaster
BTVAKBRV

BYVMTBAV
SELEX
Nitta et al.(2015)
lbe_2
0.621 0.579
lbe
M03824_2.00
Drosophila melanogaster
NTAATTRN

NYAATTAN
SELEX
Nitta et al.(2015)
lbe_3
0.621 0.579
lbe
M03825_2.00
Drosophila melanogaster
TAAYRAKN

NMTYRTTA
SELEX
Nitta et al.(2015)
lbe_4
0.621 0.579
lbe
M06510_2.00
Drosophila melanogaster
TAAYNA

TNRTTA
B1H
Mathelier et al.(2014)
MA0231.1
0.621 0.579
lbe
M06299_2.00
Drosophila melanogaster
NHTAAYNA

TNRTTADN
B1H
Zhu et al.(2011)
Lbe_Cell_FBgn0011278
0.621 0.579
lbe
M06300_2.00
Drosophila melanogaster
YTAAYBA

TVRTTAR
B1H
Zhu et al.(2011)
Lbe_SOLEXA_FBgn0011278
0.621 0.579
Dfd
M03784_2.00
Drosophila melanogaster
VNTAAYKRBN

NVYMRTTANB
SELEX
Nitta et al.(2015)
Dfd_1
0.617 0.474
Dfd
M03785_2.00
Drosophila melanogaster
VYTAATKAYN

NRTMATTARB
SELEX
Nitta et al.(2015)
Dfd_2
0.617 0.474
Dfd
M06481_2.00
Drosophila melanogaster
YTAATGA

TCATTAR
B1H
Mathelier et al.(2014)
MA0186.1
0.617 0.474
Dfd
M06226_2.00
Drosophila melanogaster
VYTAATGA

TCATTAAB
B1H
Zhu et al.(2011)
Dfd_Cell_FBgn0000439
0.617 0.474
Dfd
M06227_2.00
Drosophila melanogaster
TTAATKRY

RYMATTAA
B1H
Zhu et al.(2011)
Dfd_FlyReg_FBgn0000439
0.617 0.474
Dfd
M06228_2.00
Drosophila melanogaster
NBTAATKR

YMATTAVN
B1H
Zhu et al.(2011)
Dfd_SOLEXA_FBgn0000439
0.617 0.474
Dfd
M09675_2.00
Drosophila melanogaster
TTAATKRB

VYMATTAA
Misc
Kulakovskiy et al.(2009)
Dfd
0.617 0.474
Dfd
M10784_2.00
Drosophila melanogaster
NNNNRKTAATNNNNNN

NNNNNNATTAMYNNNN
Transfac
Matys et al.(2006)
I$DFD_01
0.617 0.474
NEMVEDRAFT_v1g164989
M02148_2.00
Nematostella vectensis
YTAATTAG

CTAATTAR
PBM
Weirauch et al.(2014)
pTH5994
0.617 0.544
LBX1
M02090_2.00
Homo sapiens
NTAAYTRG

CYARTTAN
PBM
Weirauch et al.(2014)
pTH6404
0.609 0.579
lbl
M00561_2.00
Drosophila melanogaster
NTAAYDRGN

NCYHRTTAN
PBM
Busser et al.(2012a)
Lbl
0.609 0.561
lbl
M03815_2.00
Drosophila melanogaster
NTAAYKRG

CYMRTTAN
SELEX
Nitta et al.(2015)
lbl_1
0.609 0.561
lbl
M03816_2.00
Drosophila melanogaster
NTAAYRAGN

NCTYRTTAN
SELEX
Nitta et al.(2015)
lbl_2
0.609 0.561
lbl
M06508_2.00
Drosophila melanogaster
TAATKR

YMATTA
B1H
Mathelier et al.(2014)
MA0232.1
0.609 0.561
lbl
M06295_2.00
Drosophila melanogaster
VHTAATKR

YMATTADB
B1H
Zhu et al.(2011)
Lbl_Cell_FBgn0008651
0.609 0.561
lbl
M06296_2.00
Drosophila melanogaster
NHTAAYBA

TVRTTADN
B1H
Zhu et al.(2011)
Lbl_SOLEXA_FBgn0008651
0.609 0.561
Q70HR3_PLEPI
M02210_2.00
Pleurobrachia pileus
NVVTACTWRD

HYWAGTABBN
PBM
Weirauch et al.(2014)
pTH6529
0.602 0.544
Evx2
M00393_2.00
Mus musculus
NNTAAYNN

NNRTTANN
PBM
Berger et al.(2008)
Evx2_2645
0.600 0.439
Evx1
M00395_2.00
Mus musculus
NTAATBDNN

NNHVATTAN
PBM
Berger et al.(2008)
Evx1_3952
0.600 0.439
EVX1
M03102_2.00
Homo sapiens
NNTAATBRBN

NVYVATTANN
SELEX
Jolma et al.(2013)
EVX1_1
0.600 0.439
EVX2
M03215_2.00
Homo sapiens
NNTAATBRBN

NVYVATTANN
SELEX
Jolma et al.(2013)
EVX2_1
0.600 0.439
EVX1
M04985_2.00
Homo sapiens
VTAATKAB

VTMATTAB
SELEX
Yin et al.(2017)
EVX1_eDBD_HT-SELEX
0.600 0.439
EVX2
M05295_2.00
Homo sapiens
NTAATKAN

NTMATTAN
SELEX
Yin et al.(2017)
EVX2_eDBD_HT-SELEX
0.600 0.439
EVX2
M09158_2.00
Homo sapiens
NBTTTATKRCHNN

NNDGYMATAAAVN
Misc
Kulakovskiy et al.(2013)
EVX2_HUMAN.H11MO.0.A
0.600 0.439
Evx1
M09174_2.00
Mus musculus
WGATTTATDRBHN

NDVYHATAAATCW
Misc
Kulakovskiy et al.(2013)
EVX1_MOUSE.H11MO.0.C
0.600 0.439
Evx2
M09173_2.00
Mus musculus
BTTTATKRCHBN

NVDGYMATAAAV
Misc
Kulakovskiy et al.(2013)
EVX2_MOUSE.H11MO.0.A
0.600 0.439
EVX2
M10736_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EVX2_04
0.600 0.439
EVX1
M04986_2.00
Homo sapiens
NTMATKAN

NTMATKAN
SELEX
Yin et al.(2017)
EVX1_eDBD_Methyl-HT-SELEX_1
0.600 0.439
EVX1
M04987_2.00
Homo sapiens
HTWAYGAB

VTCRTWAD
SELEX
Yin et al.(2017)
EVX1_eDBD_Methyl-HT-SELEX_2
0.600 0.439
EVX2
M05296_2.00
Homo sapiens
NTAATKAN

NTMATTAN
SELEX
Yin et al.(2017)
EVX2_eDBD_Methyl-HT-SELEX_1
0.600 0.439
EVX2
M05297_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
EVX2_eDBD_Methyl-HT-SELEX_2
0.600 0.439
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000014497 Homeodomain 167 223

Links

Other Homeodomain family TFs
Other Cavia porcellus TFs

2247 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00051p00204250 Amborella trichopoda AMTR_s00051p00204250 I 0.000
Aquca_010_00625 Aquilegia coerulea Aquca_010_00625 I 0.000
Aquca_007_00717 Aquilegia coerulea Aquca_007_00717 I 0.000
RAP2.9 Arabidopsis lyrata fgenesh2_kg.6__2823__AT4G06746.1 I 0.000
RAP2.1 Arabidopsis lyrata scaffold_104275.1 I 0.000
DEAR3 Arabidopsis lyrata fgenesh2_kg.4__264__AT2G23340.1 I 0.000
CEJ1 Arabidopsis lyrata fgenesh2_kg.5__1372__AT3G50260.1 I 0.000
RAP2.10 Arabidopsis lyrata scaffold_700370.1 I 0.000
DEAR2 Arabidopsis lyrata scaffold_803390.1 I 0.000
ERF010 Arabidopsis thaliana AT5G67190 D 0.000
RAP2-9 Arabidopsis thaliana AT4G06746 D 0.000
RAP2-10 Arabidopsis thaliana AT4G36900 D 0.000
ERF011 Arabidopsis thaliana AT3G50260 D 0.000
ERF008 Arabidopsis thaliana AT2G23340 D 0.000
RAP2-1 Arabidopsis thaliana AT1G46768 D 0.000
Bostr.0568s0141 Boechera stricta Bostr.0568s0141 I 0.000
Bostr.12302s0138 Boechera stricta Bostr.12302s0138 I 0.000
Bostr.27895s0153 Boechera stricta Bostr.27895s0153 I 0.000
Bostr.3877s0058 Boechera stricta Bostr.3877s0058 I 0.000
Bostr.6864s0220 Boechera stricta Bostr.6864s0220 I 0.000
Bostr.7867s1581 Boechera stricta Bostr.7867s1581 I 0.000
BRADI5G24110 Brachypodium distachyon BRADI5G24110 I 0.000
BRADI1G48320 Brachypodium distachyon BRADI1G48320 I 0.000
Bo7g118430 Brassica oleracea Bo7g118430 I 0.000
Bo9g020380 Brassica oleracea Bo9g020380 I 0.000
Bo7g063980 Brassica oleracea Bo7g063980 I 0.000
Bo4g151460 Brassica oleracea Bo4g151460 I 0.000
Bo1g004940 Brassica oleracea Bo1g004940 I 0.000
Bo8g079660 Brassica oleracea Bo8g079660 I 0.000
Bra011744 Brassica rapa Bra011744 I 0.000
Bra012140 Brassica rapa Bra012140 I 0.000
Bra014056 Brassica rapa Bra014056 I 0.000
Bra017811 Brassica rapa Bra017811 I 0.000
Bra032173 Brassica rapa Bra032173 I 0.000
Bra036061 Brassica rapa Bra036061 I 0.000
Bra037124 Brassica rapa Bra037124 I 0.000
PK15612.1 Cannabis sativa PK15612.1 I 0.000
Cagra.0342s0005 Capsella grandiflora Cagra.0342s0005 I 0.000
Cagra.1735s0005 Capsella grandiflora Cagra.1735s0005 I 0.000
Cagra.29993s0001 Capsella grandiflora Cagra.29993s0001 I 0.000
Cagra.4909s0050 Capsella grandiflora Cagra.4909s0050 I 0.000
Cagra.0706s0004 Capsella grandiflora Cagra.0706s0004 I 0.000
Carubv10005767m.g Capsella rubella Carubv10005767m.g I 0.000
Carubv10010891m.g Capsella rubella Carubv10010891m.g I 0.000
Carubv10018162m.g Capsella rubella Carubv10018162m.g I 0.000
Carubv10024198m.g Capsella rubella Carubv10024198m.g I 0.000
Carubv10027999m.g Capsella rubella Carubv10027999m.g I 0.000
Ca_01556 Cicer arietinum Ca_01556 I 0.000
Ca_02170 Cicer arietinum Ca_02170 I 0.000
Cla014175 Citrullus lanatus Cla014175 I 0.000
Cla020550 Citrullus lanatus Cla020550 I 0.000
Cla022937 Citrullus lanatus Cla022937 I 0.000
Cla020961 Citrullus lanatus Cla020961 I 0.000
Ciclev10026687m.g Citrus clementina Ciclev10026687m.g I 0.000
Ciclev10002733m.g Citrus clementina Ciclev10002733m.g I 0.000
orange1.1g041516m.g Citrus sinensis orange1.1g041516m.g I 0.000
orange1.1g031669m.g Citrus sinensis orange1.1g031669m.g I 0.000
Cucsa.367300 Cucumis sativus Cucsa.367300 I 0.000
Cucsa.352470 Cucumis sativus Cucsa.352470 I 0.000
Cucsa.102560 Cucumis sativus Cucsa.102560 I 0.000
Cucsa.395960 Cucumis sativus Cucsa.395960 I 0.000
Eucgr.F00192 Eucalyptus grandis Eucgr.F00192 I 0.000
Eucgr.F02319 Eucalyptus grandis Eucgr.F02319 I 0.000
Eucgr.H02094 Eucalyptus grandis Eucgr.H02094 I 0.000
Eucgr.F02317 Eucalyptus grandis Eucgr.F02317 I 0.000
Thhalv10026288m.g Eutrema salsugineum Thhalv10026288m.g I 0.000
Thhalv10029052m.g Eutrema salsugineum Thhalv10029052m.g I 0.000
Thhalv10004985m.g Eutrema salsugineum Thhalv10004985m.g I 0.000
Thhalv10000354m.g Eutrema salsugineum Thhalv10000354m.g I 0.000
gene09137-v1.0-hybrid Fragaria vesca gene09137-v1.0-hybrid I 0.000
gene23873-v1.0-hybrid Fragaria vesca gene23873-v1.0-hybrid I 0.000
GLYMA17G35860 Glycine max GLYMA17G35860 I 0.000
GLYMA01G39540 Glycine max GLYMA01G39540 I 0.000
GLYMA04G04355 Glycine max GLYMA04G04355 I 0.000
GLYMA05G19050 Glycine max GLYMA05G19050 I 0.000
GLYMA06G04490 Glycine max GLYMA06G04490 I 0.000
GLYMA11G05700 Glycine max GLYMA11G05700 I 0.000
GLYMA14G09320 Glycine max GLYMA14G09320 I 0.000
GLYMA17G18580 Glycine max GLYMA17G18580 I 0.000
Gorai.003G026100 Gossypium raimondii Gorai.003G026100 I 0.000
Gorai.009G214300 Gossypium raimondii Gorai.009G214300 I 0.000
Gorai.010G021900 Gossypium raimondii Gorai.010G021900 I 0.000
Gorai.008G077900 Gossypium raimondii Gorai.008G077900 I 0.000
Gorai.003G099700 Gossypium raimondii Gorai.003G099700 I 0.000
MLOC_81350 Hordeum vulgare MLOC_81350 I 0.000
LPERR04G23120 Leersia perrieri LPERR04G23120 I 0.000
LPERR06G04000 Leersia perrieri LPERR06G04000 I 0.000
Lus10009373.g Linum usitatissimum Lus10009373.g I 0.000
Lus10010043.g Linum usitatissimum Lus10010043.g I 0.000
Lus10018727.g Linum usitatissimum Lus10018727.g I 0.000
LjSGA_007705.1 Lotus japonicus LjSGA_007705.1 I 0.000
LjSGA_004289.2 Lotus japonicus LjSGA_004289.2 I 0.000
LjSGA_134387.1 Lotus japonicus LjSGA_134387.1 I 0.000
MDP0000125673 Malus domestica MDP0000125673 I 0.000
MDP0000179962 Malus domestica MDP0000179962 I 0.000
MDP0000756341 Malus domestica MDP0000756341 I 0.000
cassava17493.valid.m1 Manihot esculenta cassava17493.valid.m1 I 0.000
cassava47353.m1 Manihot esculenta cassava47353.m1 I 0.000
cassava9153.m1 Manihot esculenta cassava9153.m1 I 0.000
MTR_5g016750 Medicago truncatula MTR_5g016750 I 0.000
MTR_3g102100 Medicago truncatula MTR_3g102100 I 0.000
MTR_1g019110 Medicago truncatula MTR_1g019110 I 0.000
mgf025363m Mimulus guttatus mgf025363m I 0.000
mgf021115m Mimulus guttatus mgf021115m I 0.000
mgf006561m Mimulus guttatus mgf006561m I 0.000
mgf000289m Mimulus guttatus mgf000289m I 0.000
GSMUA_Achr9G11310_001 Musa acuminata GSMUA_Achr9G11310_001 I 0.000
GSMUA_Achr7G20800_001 Musa acuminata GSMUA_Achr7G20800_001 I 0.000
GSMUA_Achr7G05410_001 Musa acuminata GSMUA_Achr7G05410_001 I 0.000
GSMUA_Achr5G22190_001 Musa acuminata GSMUA_Achr5G22190_001 I 0.000
GSMUA_AchrUn_randomG26940_001 Musa acuminata GSMUA_AchrUn_randomG26940_001 I 0.000
GSMUA_Achr8G15640_001 Musa acuminata GSMUA_Achr8G15640_001 I 0.000
GSMUA_Achr4G20280_001 Musa acuminata GSMUA_Achr4G20280_001 I 0.000
GSMUA_Achr3G13190_001 Musa acuminata GSMUA_Achr3G13190_001 I 0.000
GSMUA_AchrUn_randomG12040_001 Musa acuminata GSMUA_AchrUn_randomG12040_001 I 0.000
OBART06G04460 Oryza barthii OBART06G04460 I 0.000
ORGLA04G0237600 Oryza glaberrima ORGLA04G0237600 I 0.000
ORGLA06G0041000 Oryza glaberrima ORGLA06G0041000 I 0.000
OGLUM06G04560 Oryza glumaepatula OGLUM06G04560 I 0.000
OGLUM04G27370 Oryza glumaepatula OGLUM04G27370 I 0.000
BGIOSGA014221 Oryza indica BGIOSGA014221 I 0.000
BGIOSGA022380 Oryza indica BGIOSGA022380 I 0.000
BGIOSGA014220 Oryza indica BGIOSGA014220 I 0.000
OMERI04G22870 Oryza meridionalis OMERI04G22870 I 0.000
ONIVA06G05630 Oryza nivara ONIVA06G05630 I 0.000
ONIVA04G25910 Oryza nivara ONIVA04G25910 I 0.000
OPUNC06G04240 Oryza punctata OPUNC06G04240 I 0.000
ORUFI06G04420 Oryza rufipogon ORUFI06G04420 I 0.000
OS04G0648900 Oryza sativa OS04G0648900 I 0.000
OS06G0166400 Oryza sativa OS06G0166400 I 0.000
Pavir.J04844 Panicum virgatum Pavir.J04844 I 0.000
Pavir.J27349 Panicum virgatum Pavir.J27349 I 0.000
Pavir.J34361 Panicum virgatum Pavir.J34361 I 0.000
Pavir.J20437 Panicum virgatum Pavir.J20437 I 0.000
POPTR_0014s02530 Populus trichocarpa POPTR_0014s02530 I 0.000
POPTR_0002s12550 Populus trichocarpa POPTR_0002s12550 I 0.000
POPTR_0007s10750 Populus trichocarpa POPTR_0007s10750 I 0.000
PRUPE_ppa012516mg Prunus persica PRUPE_ppa012516mg I 0.000
PRUPE_ppa012302mg Prunus persica PRUPE_ppa012302mg I 0.000
30170.m013843 Ricinus communis 30170.m013843 I 0.000
28718.m000038 Ricinus communis 28718.m000038 I 0.000
SapurV1A.1616s0040 Salix purpurea SapurV1A.1616s0040 I 0.000
SapurV1A.1340s0030 Salix purpurea SapurV1A.1340s0030 I 0.000
SapurV1A.0689s0100 Salix purpurea SapurV1A.0689s0100 I 0.000
SapurV1A.0423s0180 Salix purpurea SapurV1A.0423s0180 I 0.000
SapurV1A.0167s0190 Salix purpurea SapurV1A.0167s0190 I 0.000
SapurV1A.2355s0030 Salix purpurea SapurV1A.2355s0030 I 0.000
Solyc04g078640.1 Solanum lycopersicum Solyc04g078640.1 I 0.000
PGSC0003DMG400034101 Solanum tuberosum PGSC0003DMG400034101 I 0.000
PGSC0003DMG400007951 Solanum tuberosum PGSC0003DMG400007951 I 0.000
PGSC0003DMG400004005 Solanum tuberosum PGSC0003DMG400004005 I 0.000
Sb10g004580 Sorghum bicolor Sb10g004580 I 0.000
Sb06g030660 Sorghum bicolor Sb06g030660 I 0.000
TCM_000669 Theobroma cacao TCM_000669 I 0.000
TCM_033791 Theobroma cacao TCM_033791 I 0.000
Traes_2BL_1E57B73B21 Triticum aestivum Traes_2BL_1E57B73B21 I 0.000
VIT_18s0001g10150 Vitis vinifera VIT_18s0001g10150 I 0.000
VIT_07s0031g00190 Vitis vinifera VIT_07s0031g00190 I 0.000
GRMZM2G119865 Zea mays GRMZM2G119865 I 0.000
GRMZM2G174917 Zea mays GRMZM2G174917 I 0.000
GRMZM2G301860 Zea mays GRMZM2G301860 I 0.000
GRMZM2G421033 Zea mays GRMZM2G421033 I 0.000