CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCSAG00000000068
(
Chlorocebus sabaeus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSCSAG00000000068
T208238_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TGIF2LX
M03171_2.00
Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA
SELEX
Jolma et al.(2013)
TGIF2LX_1
0.618
0.764
TGIF2LX
M05191_2.00
Homo sapiens
TGACABVTGTCA
TGACABVTGTCA
SELEX
Yin et al.(2017)
TGIF2LX_eDBD_HT-SELEX
0.618
0.764
TGIF2LX
M05193_2.00
Homo sapiens
TGACASSTGTCA
TGACASSTGTCA
SELEX
Yin et al.(2017)
TGIF2LX_FL_HT-SELEX
0.618
0.764
TGIF2LX
M05192_2.00
Homo sapiens
TGACABVTGTCA
TGACABVTGTCA
SELEX
Yin et al.(2017)
TGIF2LX_eDBD_Methyl-HT-SELEX
0.618
0.764
TGIF2LX
M05194_2.00
Homo sapiens
TGACASSTGTCA
TGACASSTGTCA
SELEX
Yin et al.(2017)
TGIF2LX_FL_Methyl-HT-SELEX
0.618
0.764
TGIF2LY
M05313_2.00
Homo sapiens
TGACABVTGTCA
TGACABVTGTCA
SELEX
Yin et al.(2017)
TGIF2LY_eDBD_HT-SELEX
0.618
0.745
TGIF2LY
M05314_2.00
Homo sapiens
YGACABVTGTCR
YGACABVTGTCR
SELEX
Yin et al.(2017)
TGIF2LY_eDBD_Methyl-HT-SELEX
0.618
0.745
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAP00000017924
Homeodomain
57
115
KKKRTGYLPAESVKILRNWMYKHRFRAYPSEAEKRMLSRKTNLSLSQISNWFINARRRI
Links
Other
Homeodomain
family TFs
Other
Chlorocebus sabaeus
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy