hdx (Danio rerio)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSDARG00000079382 T208705_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hdx
M00463_2.00 		Mus musculus
HNWYHNN
NNDRWND		 PBM
Berger et al.(2008)
Hdx_3845 		0.816 0.873
HDX
M01246_2.00 		Homo sapiens
HNNNNNN
NNNNNND		 PBM
Lambert et al.(2019)
pTH11271 		0.816 0.864
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000102393 Homeodomain 14 71
ENSDARP00000102393 Homeodomain 421 480
ENSDARP00000130885 Homeodomain 14 71
ENSDARP00000130885 Homeodomain 421 480

Links

Other Homeodomain family TFs
Other Danio rerio TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HDX Canis familiaris ENSCAFG00000017380 I 0.832
Pvit_02951 Pogona vitticeps Pvit_02951 I 0.818
HDX Anolis carolinensis ENSACAG00000014116 I 0.818
Ogr06876 Ophisaurus gracilis Ogr06876 I 0.818
HDX Pan troglodytes ENSPTRG00000022065 I 0.816
HDX Sorex araneus ENSSARG00000009351 I 0.816
ENSSHAG00000014376 Sarcophilus harrisii ENSSHAG00000014376 I 0.816
ENSPSIG00000003320 Pelodiscus sinensis ENSPSIG00000003320 I 0.816
ENSPANG00000014327 Papio anubis ENSPANG00000014327 I 0.816
HDX Oryctolagus cuniculus ENSOCUG00000000903 I 0.816
HDX Taeniopygia guttata ENSTGUG00000002499 I 0.816
ENSOARG00000001832 Ovis aries ENSOARG00000001832 I 0.816
ENSPPYG00000020514 Pongo abelii ENSPPYG00000020514 I 0.816
Aan_R004747 Calypte anna Aan_R004747 I 0.816
Cmyd_10021519 Chelonia mydas Cmyd_10021519 I 0.816
ENSP00000297977 Macaca fascicularis ENSP00000297977 I 0.816
Gfo_R008526 Geospiza fortis Gfo_R008526 I 0.816
Brh_R002803 Buceros rhinoceros Brh_R002803 I 0.816
Alligator_sinensis_CCG017359.1 Alligator sinensis Alligator_sinensis_CCG017359.1 I 0.816
HDX Vicugna pacos ENSVPAG00000003255 I 0.816
ENSNLEG00000002624 Nomascus leucogenys ENSNLEG00000002624 I 0.816
Afo_R014150 Aptenodytes forsteri Afo_R014150 I 0.816
ENSTSYG00000009619 Tarsius syrichta ENSTSYG00000009619 I 0.816
HDX Otolemur garnettii ENSOGAG00000031446 I 0.816
HDX Homo sapiens ENSG00000165259 D 0.816
HDX Felis catus ENSFCAG00000005781 I 0.816
ENSAPLG00000007946 Anas platyrhynchos ENSAPLG00000007946 I 0.816
Hdx Mus musculus ENSMUSG00000034551 D 0.816
HDX Gallus gallus ENSGALG00000007041 I 0.816
ENSFALG00000004050 Ficedula albicollis ENSFALG00000004050 I 0.816
HDX Echinops telfairi ENSETEG00000018031 I 0.816
HDX Cavia porcellus ENSCPOG00000014501 I 0.816
ENSCSAG00000010546 Chlorocebus sabaeus ENSCSAG00000010546 I 0.816
HDX Equus caballus ENSECAG00000024862 I 0.816
HDX Erinaceus europaeus ENSEEUG00000011626 I 0.816
HDX Callithrix jacchus ENSCJAG00000008295 I 0.816
HDX Gorilla gorilla ENSGGOG00000005551 I 0.816
HDX Macaca mulatta ENSMMUG00000020536 I 0.816
HDX Meleagris gallopavo ENSMGAG00000004732 I 0.816
HDX Loxodonta africana ENSLAFG00000028655 I 0.816
HDX Monodelphis domestica ENSMODG00000014307 I 0.816
ENSMPUG00000006315 Mustela putorius furo ENSMPUG00000006315 I 0.816
HDX Tursiops truncatus ENSTTRG00000000100 I 0.815
hdx Xenopus tropicalis XB-GENE-853748 I 0.815
ENSLOCG00000015046 Lepisosteus oculatus ENSLOCG00000015046 I 0.814
Hdx Rattus norvegicus ENSRNOG00000037799 I 0.789
ENSLACG00000001553 Latimeria chalumnae ENSLACG00000001553 I 0.788
ENSGMOG00000004501 Gadus morhua ENSGMOG00000004501 I 0.730
ENSPFOG00000004291 Poecilia formosa ENSPFOG00000004291 I 0.718
ENSXMAG00000011901 Xiphophorus maculatus ENSXMAG00000011901 I 0.718
hdx Oryzias latipes ENSORLG00000008466 I 0.717
hdx Gasterosteus aculeatus ENSGACG00000018543 I 0.707
ENSONIG00000017662 Oreochromis niloticus ENSONIG00000017662 I 0.707
rps6kal Tetraodon nigroviridis ENSTNIG00000015774 I 0.689
hdx Takifugu rubripes ENSTRUG00000008150 I 0.681
ENSPMAG00000004328 Petromyzon marinus ENSPMAG00000004328 I 0.648
Myotis_brandtii_HDX_10020373 Myotis brandtii Myotis_brandtii_HDX_10020373 I 0.636