CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
IRX3
(
Dasypus novemcinctus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSDNOG00000012985
T208804_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_07914
M02132_2.00
Fusarium graminearum
NNKACATGTHN
NDACATGTMNN
PBM
Weirauch et al.(2014)
pTH6329
0.625
0.405
Irx3
M00453_2.00
Mus musculus
NNDACAHNNN
NNNDTGTHNN
PBM
Berger et al.(2008)
Irx3_0920
0.496
1.000
Irx3
M00454_2.00
Mus musculus
NNDACWHN
NDWGTHNN
PBM
Berger et al.(2008)
Irx3_2226
0.496
1.000
Irx3
M03266_2.00
Mus musculus
WWTKTCATGTWR
YWACATGAMAWW
SELEX
Jolma et al.(2013)
Irx3_1
0.496
1.000
IRX1
M05283_2.00
Homo sapiens
DDCRHNNNNNNNNDYGHH
DDCRHNNNNNNNNDYGHH
SELEX
Yin et al.(2017)
IRX1_eDBD_HT-SELEX
0.496
1.000
IRX3
M05319_2.00
Homo sapiens
DACAHGNWWWWNCDTGTH
DACAHGNWWWWNCDTGTH
SELEX
Yin et al.(2017)
IRX3_eDBD_HT-SELEX
0.496
1.000
IRX1
M05284_2.00
Homo sapiens
NNCRHNNNNNNNNDYVHN
NDBRHNNNNNNNNDYGNN
SELEX
Yin et al.(2017)
IRX1_eDBD_Methyl-HT-SELEX
0.496
1.000
IRX3
M05320_2.00
Homo sapiens
DACRYRHNWWNDYKCGTW
WACGMRHNWWNDYRYGTH
SELEX
Yin et al.(2017)
IRX3_eDBD_Methyl-HT-SELEX
0.496
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000010070
Homeodomain
86
127
LNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK
Links
Other
Homeodomain
family TFs
Other
Dasypus novemcinctus
TFs
205 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy