Pknox2 (Dipodomys ordii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSDORG00000008635 T209008_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Pknox2
M00468_2.00 		Mus musculus
NNNGACRNNN
NNNYGTCNNN		 PBM
Berger et al.(2008)
Pknox2_3077 		0.400 1.000
PKNOX2
M03195_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
PKNOX2_1 		0.400 1.000
Pknox2
M03270_2.00 		Mus musculus
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
Pknox2_1 		0.400 1.000
PKNOX2
M05246_2.00 		Homo sapiens
TGACABVTGTCA
TGACABVTGTCA		 SELEX
Yin et al.(2017)
PKNOX2_eDBD_HT-SELEX 		0.400 1.000
PKNOX2
M05247_2.00 		Homo sapiens
TGACASSTGTCA
TGACASSTGTCA		 SELEX
Yin et al.(2017)
PKNOX2_eDBD_Methyl-HT-SELEX 		0.400 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000008103 Homeodomain 289 337

Links

Other Homeodomain family TFs
Other Dipodomys ordii TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PKNOX1 Procavia capensis ENSPCAG00000016718 I 0.867
ENSMEUG00000003851 Macropus eugenii ENSMEUG00000003851 I 0.867
PKNOX2 Choloepus hoffmanni ENSCHOG00000008048 I 0.867
Aan_R012134 Calypte anna Aan_R012134 I 0.867
ENSPMAG00000005538 Petromyzon marinus ENSPMAG00000005538 N 0.785
MEIS2 Sorex araneus ENSSARG00000006585 I 0.751
MEIS2 Taeniopygia guttata ENSTGUG00000011748 I 0.751
MCOS_0000352701 Mesocestoides corti MCOS_0000352701 N 0.749
CLEC025153 Cimex lectularius CLEC025153 I 0.733
RO3G_00994 Rhizopus oryzae RO3G_00994 N 0.719
D915_09501 Fasciola hepatica D915_09501 I 0.703
LDEC001304 Leptinotarsa decemlineata LDEC001304 I 0.703
Tal_R002601 Tyto alba Tal_R002601 I 0.703
D918_09737 Trichuris suis D918_09737 N 0.703
DILT_0001314701 Diphyllobothrium latum DILT_0001314701 N 0.703
TTRE_0000256401 Trichuris trichiura TTRE_0000256401 N 0.703
TRE_0000372801 Trichobilharzia regenti TRE_0000372801 N 0.703
SPER_0001318201 Spirometra erinaceieuropaei SPER_0001318201 N 0.703
SCUD_0001235001 Schistosoma curassoni SCUD_0001235001 N 0.703
Pvit_18888 Pogona vitticeps Pvit_18888 I 0.703
Brh_R013532 Buceros rhinoceros Brh_R013532 I 0.703
ENSMGAG00000015905 Meleagris gallopavo ENSMGAG00000015905 I 0.703
ENSPANG00000019600 Papio anubis ENSPANG00000019600 I 0.703
MEIS3 Callithrix jacchus ENSCJAG00000011475 I 0.703
ENSCSAG00000007217 Chlorocebus sabaeus ENSCSAG00000007217 I 0.703
CapteG139538 Capitella teleta CapteG139538 N 0.703
PHUM547170 Pediculus humanus PHUM547170 I 0.703
nRc.2.0.1.g19666 Romanomermis culicivorax nRc.2.0.1.g19666 N 0.702
Meis3 Mus musculus ENSMUSG00000041420 D 0.700
ENSPSIG00000016694 Pelodiscus sinensis ENSPSIG00000016694 N 0.689
ONIVA12G08480 Oryza nivara ONIVA12G08480 N 0.632
Tgif2 Mus musculus ENSMUSG00000062175 D 0.631
TGIF1 Homo sapiens ENSG00000177426 D 0.630
Tgif1 Mus musculus ENSMUSG00000047407 D 0.630