ENSECAG00000024772 (Equus caballus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSECAG00000024772 T209211_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Cdx1
M00427_2.00
Mus musculus
NWWATDRNN

NNYHATWWN
PBM
Berger et al.(2008)
Cdx1_2245
0.867 1.000
CDX1
M03115_2.00
Homo sapiens
NTTTATKRB

VYMATAAAN
SELEX
Jolma et al.(2013)
CDX1_1
0.867 1.000
CDX1
M05018_2.00
Homo sapiens
VKTTTATKRCN

NGYMATAAAMB
SELEX
Yin et al.(2017)
CDX1_eDBD_HT-SELEX
0.867 1.000
CDX1
M09140_2.00
Homo sapiens
HCWTAAAD

HTTTAWGD
Misc
Kulakovskiy et al.(2013)
CDX1_HUMAN.H11MO.0.C
0.867 1.000
Cdx1
M09186_2.00
Mus musculus
HCWTAAAD

HTTTAWGD
Misc
Kulakovskiy et al.(2013)
CDX1_MOUSE.H11MO.0.C
0.867 1.000
CDX1
M10670_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDX1_Q4
0.867 1.000
CDX1
M10671_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDX1_Q5
0.867 1.000
CDX1
M05019_2.00
Homo sapiens
NGTCGTAAAWB

VWTTTACGACN
SELEX
Yin et al.(2017)
CDX1_eDBD_Methyl-HT-SELEX
0.867 1.000
CDX1
M10761_2.00
Gallus gallus
BDBWAAK

MTTWVHV
Transfac
Matys et al.(2006)
V$CDXA_01
0.855 0.965
CDX1
M10762_2.00
Gallus gallus
WWWWMYR

YRKWAWW
Transfac
Matys et al.(2006)
V$CDXA_02
0.855 0.965
CDX2
M03196_2.00
Homo sapiens
KTTTATKRB

VYMATAAAM
SELEX
Jolma et al.(2013)
CDX2_1
0.855 0.947
CDX2
M05248_2.00
Homo sapiens
NDTWAYRRYN

NRYYRTWAHN
SELEX
Yin et al.(2017)
CDX2_eDBD_HT-SELEX_1
0.855 0.947
CDX2
M05249_2.00
Homo sapiens
NDWWATKRB

VYMATWWHN
SELEX
Yin et al.(2017)
CDX2_eDBD_HT-SELEX_2
0.855 0.947
CDX2
M08131_2.00
Homo sapiens
YTTTATKRCHB

VDGYMATAAAR
ChIP-seq
Mathelier et al.(2014)
MA0465.1
0.855 0.947
CDX2
M09152_2.00
Homo sapiens
DTTBATKGCHNB

VNDGCMATVAAH
Misc
Kulakovskiy et al.(2013)
CDX2_HUMAN.H11MO.0.A
0.855 0.947
CDX2
M10723_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDX2_Q5_01
0.855 0.947
CDX2
M10724_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDX2_Q5_02
0.855 0.947
CDX2
M10725_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDX2_Q5
0.855 0.947
CDX2
M10726_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDX2_Q6
0.855 0.947
CDX2
M05250_2.00
Homo sapiens
NRTCGTAWHBNN

NNVDWTACGAYN
SELEX
Yin et al.(2017)
CDX2_eDBD_Methyl-HT-SELEX
0.855 0.947
Cdx2
M00447_2.00
Mus musculus
NWWAYDRNN

NNYHRTWWN
PBM
Berger et al.(2008)
Cdx2_4272
0.850 0.947
Cdx2
M09193_2.00
Mus musculus
BTTTATKRCYBY

RVRGYMATAAAV
Misc
Kulakovskiy et al.(2013)
CDX2_MOUSE.H11MO.0.A
0.850 0.947
Cdx2
M09572_2.00
Mus musculus
NTTTTATKRC

GYMATAAAAN
Misc
Heinz et al.(2010)
mES-Cdx2_GSE14586
0.850 0.947
cad
M03780_2.00
Drosophila melanogaster
NKTTTATKRCHB

VDGYMATAAAMN
SELEX
Nitta et al.(2015)
cad_1
0.840 0.860
cad
M03781_2.00
Drosophila melanogaster
NDTTTATKRCHN

NDGYMATAAAHN
SELEX
Nitta et al.(2015)
cad_2
0.840 0.860
cad
M03782_2.00
Drosophila melanogaster
NDTTTATKRCNB

VNGYMATAAAHN
SELEX
Nitta et al.(2015)
cad_3
0.840 0.860
cad
M03783_2.00
Drosophila melanogaster
NNTTTAYGRYNN

NNRYCRTAAANN
SELEX
Nitta et al.(2015)
cad_4
0.840 0.860
cad
M06223_2.00
Drosophila melanogaster
HTTWATTR

YAATWAAD
B1H
Zhu et al.(2011)
Cad_Cell_FBgn0000251
0.840 0.860
cad
M06224_2.00
Drosophila melanogaster
RBYVDAAMV

BKTTHBRVY
B1H
Zhu et al.(2011)
cad_FlyReg_FBgn0000251
0.840 0.860
cad
M06225_2.00
Drosophila melanogaster
NTTWATKR

YMATWAAN
B1H
Zhu et al.(2011)
Cad_SOLEXA_FBgn0000251
0.840 0.860
cad
M08420_2.00
Drosophila melanogaster
DTTTTATKRYY

RRYMATAAAAH
ChIP-chip
Mathelier et al.(2014)
MA0216.2
0.840 0.860
cad
M09580_2.00
Drosophila melanogaster
DTTTAYGRYN

NRYCRTAAAH
Misc
Heinz et al.(2010)
Drosophila-Embryos_modEncode
0.840 0.860
cad
M09674_2.00
Drosophila melanogaster
HTTTATKRBY

RVYMATAAAD
Misc
Kulakovskiy et al.(2009)
cad
0.840 0.860
cad
M10783_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$CAD_Q6
0.840 0.860
Q70LF3_ARTSF
M02211_2.00
Artemia franciscana
BTAATTAB

VTAATTAV
PBM
Weirauch et al.(2014)
pTH5553
0.834 0.895
Cdx4
M09197_2.00
Mus musculus
WGATTTATDRBH

DVYHATAAATCW
Misc
Kulakovskiy et al.(2013)
CDX4_MOUSE.H11MO.0.A
0.831 0.912
CDX4
M05129_2.00
Homo sapiens
VKTTTATKRCH

DGYMATAAAMB
SELEX
Yin et al.(2017)
CDX4_FL_HT-SELEX
0.831 0.895
CDX4
M05130_2.00
Homo sapiens
BGTCGTAAAHN

NDTTTACGACV
SELEX
Yin et al.(2017)
CDX4_FL_Methyl-HT-SELEX_1
0.831 0.895
CDX4
M05131_2.00
Homo sapiens
VKTTTATKGCN

NGCMATAAAMB
SELEX
Yin et al.(2017)
CDX4_FL_Methyl-HT-SELEX_2
0.831 0.895
pal-1
M02183_2.00
Caenorhabditis elegans
GYAATWAA

TTWATTRC
PBM
Weirauch et al.(2014)
pTH6016
0.650 0.719
Q9GP48_9TURB
M02217_2.00
Discocelis tigrina
DTAATTAB

VTAATTAH
PBM
Weirauch et al.(2014)
pTH6515
0.641 0.737
Q24782_9CNID
M02206_2.00
Eleutheria dichotoma
TTAATTAA

TTAATTAA
PBM
Weirauch et al.(2014)
pTH5486
0.613 0.579
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000022292 Homeodomain 8 64

Links

Other Homeodomain family TFs
Other Equus caballus TFs

317 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NCU03417 Neurospora crassa NCU03417 D 0.000
fgenesh1_pm.C_scaffold_2000244 Cryphonectria parasitica fgenesh1_pm.C_scaffold_2000244 I 0.000
SMAC_08866 Sordaria macrospora SMAC_08866 I 0.000
S40288_03199 Stachybotrys chartarum S40288_03199 I 0.000
S40285_02170 Stachybotrys chlorohalonata S40285_02170 I 0.000
OCS_03653 Ophiocordyceps sinensis OCS_03653 I 0.000
NEUTE1DRAFT_123378 Neurospora tetrasperma NEUTE1DRAFT_123378 I 0.000
NechaG75163 Fusarium solani NechaG75163 I 0.000
MYCTH_2311613 Myceliophthora thermophila MYCTH_2311613 I 0.000
MGU_04444 Metarhizium guizhouense MGU_04444 I 0.000
MGG_16161 Magnaporthe oryzae MGG_16161 I 0.000
SPBR_05575 Sporothrix brasiliensis SPBR_05575 I 0.000
THITE_2123319 Thielavia terrestris THITE_2123319 I 0.000
TRIATDRAFT_162437 Trichoderma atroviride TRIATDRAFT_162437 I 0.000
fgenesh1_pg.sca_1_chr1_3_0000774 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000774 I 0.000
estExt_Genewise1Plus.C_160104 Neurospora discreta estExt_Genewise1Plus.C_160104 I 0.000
X797_000152 Metarhizium robertsii X797_000152 I 0.000
VHEMI10654 Torrubiella hemipterigena VHEMI10654 I 0.000
VDAG_01994 Verticillium dahliae VDAG_01994 I 0.000
UV8b_4907 Ustilaginoidea virens UV8b_4907 I 0.000
UCRPA7_8449 Togninia minima UCRPA7_8449 I 0.000
TRIVIDRAFT_80282 Trichoderma virens TRIVIDRAFT_80282 I 0.000
TRIREDRAFT_76039 Trichoderma reesei TRIREDRAFT_76039 I 0.000
MBR_02161 Metarhizium brunneum MBR_02161 I 0.000
MANI_008098 Metarhizium anisopliae MANI_008098 I 0.000
CPUR_03952 Claviceps purpurea CPUR_03952 I 0.000
Cob_11656 Colletotrichum orbiculare Cob_11656 I 0.000
CMQ_3833 Grosmannia clavigera CMQ_3833 I 0.000
CHGG_08120 Chaetomium globosum CHGG_08120 I 0.000
CH063_01773 Colletotrichum higginsianum CH063_01773 I 0.000
CGGC5_13803 Colletotrichum gloeosporioides CGGC5_13803 I 0.000
CFIO01_04298 Colletotrichum fioriniae CFIO01_04298 I 0.000
CCM_05172 Cordyceps militaris CCM_05172 I 0.000
BBA_04574 Beauveria bassiana BBA_04574 I 0.000
CTHT_0001980 Chaetomium thermophilum CTHT_0001980 I 0.000
F503_03916 Ophiostoma piceae uamh F503_03916 I 0.000
FFUJ_00629 Fusarium fujikuroi FFUJ_00629 I 0.000
MAM_03975 Metarhizium album MAM_03975 I 0.000
MAJ_00507 Metarhizium majus MAJ_00507 I 0.000
MAC_09429 Metarhizium acridum MAC_09429 I 0.000
HMPREF1624_04479 Sporothrix schenckii HMPREF1624_04479 I 0.000
GLRG_10304 Colletotrichum graminicola GLRG_10304 I 0.000
GGTG_10910 Gaeumannomyces graminis GGTG_10910 I 0.000
FVEG_00574 Fusarium verticillioides FVEG_00574 I 0.000
FPSE_01459 Fusarium pseudograminearum FPSE_01459 I 0.000
FGRRES_00967 Fusarium graminearum FGRRES_00967 I 0.000
ACRE_024280 Acremonium chrysogenum ACRE_024280 I 0.000
CFIO01_04448 Colletotrichum fioriniae CFIO01_04448 N 0.000