CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSETEG00000011891
(
Echinops telfairi
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSETEG00000011891
T209385_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tgif1
M00500_2.00
Mus musculus
NNTGACANNN
NNNTGTCANN
PBM
Berger et al.(2008)
Tgif1_2342
0.710
0.873
TGIF1
M03223_2.00
Homo sapiens
TGACAGCTGTCA
TGACAGCTGTCA
SELEX
Jolma et al.(2013)
TGIF1_1
0.710
0.873
TGIF1
M05317_2.00
Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA
SELEX
Yin et al.(2017)
TGIF1_eDBD_HT-SELEX
0.710
0.873
TGIF1
M09159_2.00
Homo sapiens
TGACAGS
SCTGTCA
Misc
Kulakovskiy et al.(2013)
TGIF1_HUMAN.H11MO.0.A
0.710
0.873
Tgif1
M09211_2.00
Mus musculus
TGACAGBNV
BNVCTGTCA
Misc
Kulakovskiy et al.(2013)
TGIF1_MOUSE.H11MO.0.A
0.710
0.873
TGIF1
M10740_2.00
Homo sapiens
WHNTGACARST
ASYTGTCANDW
Transfac
Matys et al.(2006)
V$TGIF_01
0.710
0.873
TGIF1
M05318_2.00
Homo sapiens
TGACAKVTGTCA
TGACABMTGTCA
SELEX
Yin et al.(2017)
TGIF1_eDBD_Methyl-HT-SELEX
0.710
0.873
TOS8
M02192_2.00
Saccharomyces cerevisiae
NNNTKACGTMW
WKACGTMANNN
PBM
Weirauch et al.(2014)
pTH5696
0.656
0.509
TOS8
M00057_2.00
Saccharomyces cerevisiae
NNNCRYGNNN
NNNCRYGNNN
PBM
Badis et al.(2008)
TOS8_2100
0.656
0.509
TOS8
M07486_2.00
Saccharomyces cerevisiae
NWTGACAB
VTGTCAWN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0408.1
0.656
0.509
TOS8
M08574_2.00
Saccharomyces cerevisiae
NWTGACAB
VTGTCAWN
Misc
DeBoer et al.(2011)
YGL096W_494
0.656
0.509
CUP9
M00059_2.00
Saccharomyces cerevisiae
TGACABHW
WDVTGTCA
PBM
Badis et al.(2008)
CUP9_4508
0.654
0.509
CUP9
M01553_2.00
Saccharomyces cerevisiae
NWGACAYWWH
DWWRTGTCWN
PBM
Zhu et al.(2009)
Cup9
0.654
0.509
CUP9
M07488_2.00
Saccharomyces cerevisiae
TGACAYAWW
WWTRTGTCA
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0288.1
0.654
0.509
CUP9
M08576_2.00
Saccharomyces cerevisiae
TGACAYAWW
WWTRTGTCA
Misc
DeBoer et al.(2011)
YPL177C_480
0.654
0.509
Tgif2
M00521_2.00
Mus musculus
NNTGACANNN
NNNTGTCANN
PBM
Berger et al.(2008)
Tgif2_3451
0.654
0.727
TGIF2
M03123_2.00
Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA
SELEX
Jolma et al.(2013)
TGIF2_1
0.654
0.727
TGIF2
M05032_2.00
Homo sapiens
TGACABVTGTCA
TGACABVTGTCA
SELEX
Yin et al.(2017)
TGIF2_eDBD_HT-SELEX
0.654
0.727
TGIF2
M05034_2.00
Homo sapiens
DTGACANN
NNTGTCAH
SELEX
Yin et al.(2017)
TGIF2_FL_HT-SELEX
0.654
0.727
TGIF2
M05033_2.00
Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA
SELEX
Yin et al.(2017)
TGIF2_eDBD_Methyl-HT-SELEX
0.654
0.727
TGIF2
M05035_2.00
Homo sapiens
DTGACANN
NNTGTCAH
SELEX
Yin et al.(2017)
TGIF2_FL_Methyl-HT-SELEX
0.654
0.727
achi
M03860_2.00
Drosophila melanogaster
TGACAD
HTGTCA
SELEX
Nitta et al.(2015)
achi_1
0.610
0.636
achi
M03861_2.00
Drosophila melanogaster
TGACAGMTGTCA
TGACAKCTGTCA
SELEX
Nitta et al.(2015)
achi_2
0.610
0.636
achi
M03862_2.00
Drosophila melanogaster
TGACAGNNNNNNYGTCA
TGACRNNNNNNCTGTCA
SELEX
Nitta et al.(2015)
achi_3
0.610
0.636
vis
M03859_2.00
Drosophila melanogaster
TGACAS
STGTCA
SELEX
Nitta et al.(2015)
vis_1
0.610
0.636
vis
M06534_2.00
Drosophila melanogaster
TGACAB
BTGTCA
B1H
Mathelier et al.(2014)
MA0252.1
0.610
0.636
achi
M06535_2.00
Drosophila melanogaster
TGACAG
CTGTCA
B1H
Mathelier et al.(2014)
MA0207.1
0.610
0.636
achi
M06345_2.00
Drosophila melanogaster
TGTCADW
WHTGACA
B1H
Zhu et al.(2011)
Achi_Cell_FBgn0033749
0.610
0.636
achi
M06346_2.00
Drosophila melanogaster
HTGACA
TGTCAD
B1H
Zhu et al.(2011)
Achi_SOLEXA_FBgn0033749
0.610
0.636
vis
M06343_2.00
Drosophila melanogaster
TGTCA
TGACA
B1H
Zhu et al.(2011)
Vis_Cell_FBgn0033748
0.610
0.636
vis
M06344_2.00
Drosophila melanogaster
TGTCAD
HTGACA
B1H
Zhu et al.(2011)
Vis_SOLEXA_FBgn0033748
0.610
0.636
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000009647
Homeodomain
30
85
RRRRSHLPKESVQIRDWLYHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL
Links
Other
Homeodomain
family TFs
Other
Echinops telfairi
TFs
230 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy