CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HOXA7
(
Felis catus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSFCAG00000022150
T209690_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hoxa7
M00476_2.00
Mus musculus
NNWAYNDNN
NNHNRTWNN
PBM
Berger et al.(2008)
Hoxa7_2668
0.844
0.982
Hoxa7
M00477_2.00
Mus musculus
NYHHYNNNN
NNNNRDDRN
PBM
Berger et al.(2008)
Hoxa7_3750
0.844
0.982
HOXA7
M05069_2.00
Homo sapiens
NTAATKRV
BYMATTAN
SELEX
Yin et al.(2017)
HOXA7_eDBD_HT-SELEX
0.844
0.982
Antp
M06549_2.00
Drosophila melanogaster
TTAATKA
TMATTAA
B1H
Mathelier et al.(2014)
MA0166.1
0.844
0.982
Antp
M06374_2.00
Drosophila melanogaster
YTTAATKA
TMATTAAR
B1H
Zhu et al.(2011)
Antp_Cell_FBgn0000095
0.844
0.982
Antp
M06375_2.00
Drosophila melanogaster
WTAATW
AATTAW
B1H
Zhu et al.(2011)
Antp_FlyReg_FBgn0000095
0.844
0.982
Antp
M06376_2.00
Drosophila melanogaster
NHTAATKR
YMATTADN
B1H
Zhu et al.(2011)
Antp_SOLEXA_FBgn0000095
0.844
0.982
Antp
M09682_2.00
Drosophila melanogaster
TYTTWATKA
TMATWAARA
Misc
Kulakovskiy et al.(2009)
Antp
0.844
0.982
Antp
M10789_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$ANTP_Q6_01
0.844
0.982
HOXA7
M10679_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA7_01
0.844
0.982
HOXA7
M05070_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXA7_eDBD_Methyl-HT-SELEX_1
0.844
0.982
HOXA7
M05071_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXA7_eDBD_Methyl-HT-SELEX_2
0.844
0.982
HOXB7
M00334_2.00
Homo sapiens
NBRDNNN
NNNHYVN
PBM
Barrera et al.(2016)
HOXB7_REF
0.828
0.946
Hoxb7
M00481_2.00
Mus musculus
NNWAYNDN
NHNRTWNN
PBM
Berger et al.(2008)
Hoxb7_3953
0.828
0.946
HOXB7
M05404_2.00
Homo sapiens
BTAATKRV
BYMATTAV
SELEX
Yin et al.(2017)
HOXB7_eDBD_HT-SELEX
0.828
0.946
HOXB7
M05407_2.00
Homo sapiens
BBTAATTRCN
NGYAATTAVV
SELEX
Yin et al.(2017)
HOXB7_FL_HT-SELEX
0.828
0.946
HOXB7
M09166_2.00
Homo sapiens
MATHAATCAW
WTGATTDATK
Misc
Kulakovskiy et al.(2013)
HXB7_HUMAN.H11MO.0.C
0.828
0.946
Hoxb7
M09206_2.00
Mus musculus
MATHAATCAW
WTGATTDATK
Misc
Kulakovskiy et al.(2013)
HXB7_MOUSE.H11MO.0.C
0.828
0.946
HOXB7
M05405_2.00
Homo sapiens
BTAATKRV
BYMATTAV
SELEX
Yin et al.(2017)
HOXB7_eDBD_Methyl-HT-SELEX_1
0.828
0.946
HOXB7
M05406_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXB7_eDBD_Methyl-HT-SELEX_2
0.828
0.946
HOXB7
M05408_2.00
Homo sapiens
NNTAATKRCN
NGYMATTANN
SELEX
Yin et al.(2017)
HOXB7_FL_Methyl-HT-SELEX_1
0.828
0.946
HOXB7
M05409_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXB7_FL_Methyl-HT-SELEX_2
0.828
0.946
HOXB7
M00333_2.00
Homo sapiens
NHATWTATTN
NAATAWATDN
PBM
Barrera et al.(2016)
HOXB7_R189C
0.828
0.929
ftz
M03795_2.00
Drosophila melanogaster
WTAATTRC
GYAATTAW
SELEX
Nitta et al.(2015)
ftz_1
0.818
0.857
ftz
M06488_2.00
Drosophila melanogaster
TTAATKA
TMATTAA
B1H
Mathelier et al.(2014)
MA0225.1
0.818
0.857
ftz
M06247_2.00
Drosophila melanogaster
VTTAATKA
TMATTAAB
B1H
Zhu et al.(2011)
Ftz_Cell_FBgn0001077
0.818
0.857
ftz
M06248_2.00
Drosophila melanogaster
TAATKRNH
DNYMATTA
B1H
Zhu et al.(2011)
ftz_FlyReg_FBgn0001077
0.818
0.857
ftz
M06249_2.00
Drosophila melanogaster
BTAATKA
TMATTAV
B1H
Zhu et al.(2011)
Ftz_SOLEXA_FBgn0001077
0.818
0.857
ftz
M09679_2.00
Drosophila melanogaster
YTAATKRNN
NNYMATTAR
Misc
Kulakovskiy et al.(2009)
ftz
0.818
0.857
ftz
M10787_2.00
Drosophila melanogaster
CTTAATTRBHBB
VVDVYAATTAAG
Transfac
Matys et al.(2006)
I$FTZ_01
0.818
0.857
Hoxa6
M00494_2.00
Mus musculus
NWWATKRNN
NNYMATWWN
PBM
Berger et al.(2008)
Hoxa6_1040
0.813
0.946
HOXA6
M04974_2.00
Homo sapiens
NNTAATKRVN
NBYMATTANN
SELEX
Yin et al.(2017)
HOXA6_eDBD_HT-SELEX
0.813
0.946
HOXA6
M04975_2.00
Homo sapiens
NNTAATKRBN
NVYMATTANN
SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_1
0.813
0.946
HOXA6
M04976_2.00
Homo sapiens
NTAAYGRY
RYCRTTAN
SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_2
0.813
0.946
Hoxb6
M00381_2.00
Mus musculus
NNDHNNN
NNNDHNN
PBM
Berger et al.(2008)
Hoxb6_3428
0.809
0.946
HOXB6
M04999_2.00
Homo sapiens
NTAATKRY
RYMATTAN
SELEX
Yin et al.(2017)
HOXB6_eDBD_HT-SELEX
0.809
0.946
HOXB6
M05000_2.00
Homo sapiens
HTAAYGAY
RTCRTTAD
SELEX
Yin et al.(2017)
HOXB6_eDBD_Methyl-HT-SELEX_1
0.809
0.946
HOXB6
M05001_2.00
Homo sapiens
NTWATKRB
VYMATWAN
SELEX
Yin et al.(2017)
HOXB6_eDBD_Methyl-HT-SELEX_2
0.809
0.946
Hoxc6
M00392_2.00
Mus musculus
TTAATTAB
VTAATTAA
PBM
Berger et al.(2008)
Hoxc6_3954
0.800
0.911
Hoxb8
M00517_2.00
Mus musculus
NWWAYNDNN
NNHNRTWWN
PBM
Berger et al.(2008)
Hoxb8_3780
0.799
0.821
HOXB8
M05048_2.00
Homo sapiens
NTAATKRM
KYMATTAN
SELEX
Yin et al.(2017)
HOXB8_eDBD_HT-SELEX
0.799
0.821
HOXB8
M09141_2.00
Homo sapiens
BMATHAATCAA
TTGATTDATKV
Misc
Kulakovskiy et al.(2013)
HXB8_HUMAN.H11MO.0.C
0.799
0.821
Hoxb8
M09214_2.00
Mus musculus
BMATHAATCAA
TTGATTDATKV
Misc
Kulakovskiy et al.(2013)
HXB8_MOUSE.H11MO.0.C
0.799
0.821
HOXB8
M05049_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXB8_eDBD_Methyl-HT-SELEX_1
0.799
0.821
HOXB8
M05050_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXB8_eDBD_Methyl-HT-SELEX_2
0.799
0.821
HOXD8
M03221_2.00
Homo sapiens
VHWAATKWDN
NHWMATTWDB
SELEX
Jolma et al.(2013)
HOXD8_1
0.799
0.804
HOXD8
M05310_2.00
Homo sapiens
BTAATKRY
RYMATTAV
SELEX
Yin et al.(2017)
HOXD8_eDBD_HT-SELEX
0.799
0.804
HOXD8
M05311_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXD8_eDBD_Methyl-HT-SELEX_1
0.799
0.804
HOXD8
M05312_2.00
Homo sapiens
NTWAYGRY
RYCRTWAN
SELEX
Yin et al.(2017)
HOXD8_eDBD_Methyl-HT-SELEX_2
0.799
0.804
CBG00029
M01240_2.00
Caenorhabditis briggsae
ATTAATTA
TAATTAAT
PBM
Lambert et al.(2019)
pTH11471
0.796
0.732
abd-A
M03770_2.00
Drosophila melanogaster
NNTAATKRCN
NGYMATTANN
SELEX
Nitta et al.(2015)
abd-A_1
0.792
0.911
abd-A
M03771_2.00
Drosophila melanogaster
NNTAATKRCN
NGYMATTANN
SELEX
Nitta et al.(2015)
abd-A_2
0.792
0.911
abd-A
M06475_2.00
Drosophila melanogaster
TTAATKA
TMATTAA
B1H
Mathelier et al.(2014)
MA0206.1
0.792
0.911
abd-A
M06210_2.00
Drosophila melanogaster
WTWATKDM
KHMATWAW
B1H
Zhu et al.(2011)
Abd-A_FlyReg_FBgn0000014
0.792
0.911
abd-A
M09671_2.00
Drosophila melanogaster
HTAATKRH
DYMATTAD
Misc
Kulakovskiy et al.(2009)
abd-A
0.792
0.911
abd-A
M10778_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$ABDA_Q6
0.792
0.911
Hoxd8
M00436_2.00
Mus musculus
NNWWYNNN
NNNRWWNN
PBM
Berger et al.(2008)
Hoxd8_2644
0.787
0.786
Ubx
M00558_2.00
Drosophila melanogaster
NWWAYDDNN
NNHHRTWWN
PBM
Busser et al.(2012a)
Ubx
0.783
0.893
Ubx
M03804_2.00
Drosophila melanogaster
NTAATKRH
DYMATTAN
SELEX
Nitta et al.(2015)
Ubx_1
0.783
0.893
Ubx
M06499_2.00
Drosophila melanogaster
NTTAATKR
YMATTAAN
B1H
Mathelier et al.(2014)
MA0094.2
0.783
0.893
Ubx
M06273_2.00
Drosophila melanogaster
NTTAATKR
YMATTAAN
B1H
Zhu et al.(2011)
Ubx_Cell_FBgn0003944
0.783
0.893
Ubx
M06274_2.00
Drosophila melanogaster
TAATKD
HMATTA
B1H
Zhu et al.(2011)
Ubx_FlyReg_FBgn0003944
0.783
0.893
Ubx
M06275_2.00
Drosophila melanogaster
NTTWATKR
YMATWAAN
B1H
Zhu et al.(2011)
Ubx_SOLEXA_FBgn0003944
0.783
0.893
Ubx
M09680_2.00
Drosophila melanogaster
TTAATKR
YMATTAA
Misc
Kulakovskiy et al.(2009)
Ubx
0.783
0.893
Ubx
M10788_2.00
Drosophila melanogaster
NNVNNNNTAATKRNBHNND
HNNDVNYMATTANNNNBNN
Transfac
Matys et al.(2006)
I$UBX_01
0.783
0.893
HOXB7
M00331_2.00
Homo sapiens
NNNNNNY
RNNNNNN
PBM
Barrera et al.(2016)
HOXB7_K191R
0.772
0.929
Hoxc8
M00391_2.00
Mus musculus
NNDNYNNNN
NNNNRNHNN
PBM
Berger et al.(2008)
Hoxc8_3429
0.767
0.804
HOXC8
M04912_2.00
Homo sapiens
NYAATTRN
NYAATTRN
SELEX
Yin et al.(2017)
HOXC8_FL_HT-SELEX
0.767
0.804
HOXC8
M10636_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXC8_Q3
0.767
0.804
HOXC8
M04913_2.00
Homo sapiens
NYMATKRN
NYMATKRN
SELEX
Yin et al.(2017)
HOXC8_FL_Methyl-HT-SELEX_1
0.767
0.804
HOXC8
M04914_2.00
Homo sapiens
NTWAYGRY
RYCRTWAN
SELEX
Yin et al.(2017)
HOXC8_FL_Methyl-HT-SELEX_2
0.767
0.804
HOXB7
M00332_2.00
Homo sapiens
NDWATATAYN
NRTATATWHN
PBM
Barrera et al.(2016)
HOXB7_M190L
0.752
0.929
egl-5
M09581_2.00
Caenorhabditis elegans
DWTTWATGGS
SCCATWAAWH
Misc
Heinz et al.(2010)
cElegans-L3-EGL5_modEncode
0.728
0.554
CBG00023
M02062_2.00
Caenorhabditis briggsae
NWWATKDNNN
NNNHMATWWN
PBM
Weirauch et al.(2014)
pTH5778
0.728
0.536
Q8I9J5_9BILA
M02214_2.00
Spadella cephaloptera
NVTAWTWABN
NVTWAWTABN
PBM
Weirauch et al.(2014)
pTH6164
0.726
0.696
Scr
M03799_2.00
Drosophila melanogaster
BTAATKRB
VYMATTAV
SELEX
Nitta et al.(2015)
Scr_1
0.685
0.929
Scr
M06496_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Mathelier et al.(2014)
MA0203.1
0.685
0.929
Scr
M06266_2.00
Drosophila melanogaster
HVYTAATKA
TMATTARBD
B1H
Zhu et al.(2011)
Scr_Cell_FBgn0003339
0.685
0.929
Scr
M06267_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Zhu et al.(2011)
Scr_SOLEXA_FBgn0003339
0.685
0.929
Hoxa5
M00478_2.00
Mus musculus
NTAATNDNN
NNHNATTAN
PBM
Berger et al.(2008)
Hoxa5_3415
0.685
0.911
Hoxb5
M00480_2.00
Mus musculus
NWDWTNNNN
NNNNAWHWN
PBM
Berger et al.(2008)
Hoxb5_3122
0.685
0.911
HOXB5
M03125_2.00
Homo sapiens
NNKAATKRNN
NNYMATTMNN
SELEX
Jolma et al.(2013)
HOXB5_1
0.685
0.911
HOXA5
M04968_2.00
Homo sapiens
STAATKRS
SYMATTAS
SELEX
Yin et al.(2017)
HOXA5_eDBD_HT-SELEX
0.685
0.911
HOXA5
M04971_2.00
Homo sapiens
NTMATKRB
VYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_HT-SELEX
0.685
0.911
HOXB5
M05051_2.00
Homo sapiens
NTAATKRV
BYMATTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_HT-SELEX
0.685
0.911
HOXB5
M05054_2.00
Homo sapiens
STMATKAB
VTMATKAS
SELEX
Yin et al.(2017)
HOXB5_FL_HT-SELEX
0.685
0.911
HOXA5
M10652_2.00
Homo sapiens
NGRDBKBDHNBAVTAATKRRGRDVDDDGSR
YSCHHHBHYCYYMATTABTVNDHVMVHYCN
Transfac
Matys et al.(2006)
V$HOX13_01
0.685
0.911
HOXA5
M08457_2.00
Homo sapiens
CDBWAATK
MATTWVHG
COMPILED
Mathelier et al.(2014)
MA0158.1
0.685
0.911
HOXA5
M04969_2.00
Homo sapiens
BTAATKRV
BYMATTAV
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_1
0.685
0.911
HOXA5
M04970_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_2
0.685
0.911
HOXA5
M04972_2.00
Homo sapiens
NTMATKRN
NYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_1
0.685
0.911
HOXA5
M04973_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_2
0.685
0.911
HOXB5
M05052_2.00
Homo sapiens
NTMATKRN
NYMATKAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_1
0.685
0.911
HOXB5
M05053_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_2
0.685
0.911
HOXB5
M05055_2.00
Homo sapiens
NTMATKAB
VTMATKAN
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_1
0.685
0.911
HOXB5
M05056_2.00
Homo sapiens
HTAAYGAY
RTCRTTAD
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_2
0.685
0.911
Hoxc5
M00422_2.00
Mus musculus
NWRATND
HNATYWN
PBM
Berger et al.(2008)
Hoxc5_2630
0.673
0.875
CBG23031
M01245_2.00
Caenorhabditis briggsae
NTTWATKRNN
NNYMATWAAN
PBM
Lambert et al.(2019)
pTH11458
0.659
0.500
Hoxb4
M00479_2.00
Mus musculus
NTAATNDNN
NNHNATTAN
PBM
Berger et al.(2008)
Hoxb4_2627
0.636
0.839
HOXB4
M05343_2.00
Homo sapiens
YTAATKAY
RTMATTAR
SELEX
Yin et al.(2017)
HOXB4_FL_HT-SELEX
0.636
0.839
HOXB4
M09162_2.00
Homo sapiens
YTAATKRS
SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_HUMAN.H11MO.0.B
0.636
0.839
Hoxb4
M09204_2.00
Mus musculus
YTAATKRS
SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_MOUSE.H11MO.0.A
0.636
0.839
Hoxb4
M09576_2.00
Mus musculus
TGATDRATKRSN
NSYMATYHATCA
Misc
Heinz et al.(2010)
ES-Hoxb4_GSE34014
0.636
0.839
HOXB4
M05344_2.00
Homo sapiens
HTAAYGAY
RTCRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_1
0.636
0.839
HOXB4
M05345_2.00
Homo sapiens
HTAAYKAB
VTMRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_2
0.636
0.839
HOXD4
M05273_2.00
Homo sapiens
NTMATKRV
BYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_HT-SELEX
0.628
0.857
HOXD4
M05276_2.00
Homo sapiens
NTAATKRB
VYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_HT-SELEX
0.628
0.857
HOXD4
M05274_2.00
Homo sapiens
NTMATKRN
NYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_1
0.628
0.857
HOXD4
M05275_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_2
0.628
0.857
HOXD4
M05277_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_1
0.628
0.857
HOXD4
M05278_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_2
0.628
0.857
Hoxa4
M00383_2.00
Mus musculus
NTAATBDNN
NNHVATTAN
PBM
Berger et al.(2008)
Hoxa4_3426
0.628
0.839
HOXA4
M05381_2.00
Homo sapiens
NTAATKRY
RYMATTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_HT-SELEX
0.628
0.839
HOXA4
M10755_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA4_Q2
0.628
0.839
HOXA4
M05382_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_Methyl-HT-SELEX
0.628
0.839
HOXC4
M00330_2.00
Homo sapiens
YTAATTRB
VYAATTAR
PBM
Barrera et al.(2016)
HOXC4_REF
0.624
0.839
Hoxc4
M00530_2.00
Mus musculus
NWAATNDNN
NNHNATTWN
PBM
Berger et al.(2008)
Hoxc4_3491
0.624
0.839
HOXC4
M05385_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_HT-SELEX
0.624
0.839
HOXC4
M05386_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_1
0.624
0.839
HOXC4
M05387_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_2
0.624
0.839
HOXC4
M00328_2.00
Homo sapiens
YTAATTAB
VTAATTAR
PBM
Barrera et al.(2016)
HOXC4_N178S
0.624
0.821
Dfd
M03784_2.00
Drosophila melanogaster
VNTAAYKRBN
NVYMRTTANB
SELEX
Nitta et al.(2015)
Dfd_1
0.622
0.821
Dfd
M03785_2.00
Drosophila melanogaster
VYTAATKAYN
NRTMATTARB
SELEX
Nitta et al.(2015)
Dfd_2
0.622
0.821
Dfd
M06481_2.00
Drosophila melanogaster
YTAATGA
TCATTAR
B1H
Mathelier et al.(2014)
MA0186.1
0.622
0.821
Dfd
M06226_2.00
Drosophila melanogaster
VYTAATGA
TCATTAAB
B1H
Zhu et al.(2011)
Dfd_Cell_FBgn0000439
0.622
0.821
Dfd
M06227_2.00
Drosophila melanogaster
TTAATKRY
RYMATTAA
B1H
Zhu et al.(2011)
Dfd_FlyReg_FBgn0000439
0.622
0.821
Dfd
M06228_2.00
Drosophila melanogaster
NBTAATKR
YMATTAVN
B1H
Zhu et al.(2011)
Dfd_SOLEXA_FBgn0000439
0.622
0.821
Dfd
M09675_2.00
Drosophila melanogaster
TTAATKRB
VYMATTAA
Misc
Kulakovskiy et al.(2009)
Dfd
0.622
0.821
Dfd
M10784_2.00
Drosophila melanogaster
NNNNRKTAATNNNNNN
NNNNNNATTAMYNNNN
Transfac
Matys et al.(2006)
I$DFD_01
0.622
0.821
SPU_026099
M02175_2.00
Strongylocentrotus purpuratus
KTAATTRB
VYAATTAM
PBM
Weirauch et al.(2014)
pTH6140
0.616
0.732
Pdx1
M00446_2.00
Mus musculus
NWRAYNNN
NNNRTYWN
PBM
Berger et al.(2008)
Ipf1_3815
0.616
0.696
PDX1
M03155_2.00
Homo sapiens
NTAATTRNNNYTAATTRN
NYAATTARNNNYAATTAN
SELEX
Jolma et al.(2013)
PDX1_1
0.616
0.696
PDX1
M03156_2.00
Homo sapiens
BTAATKRN
NYMATTAV
SELEX
Jolma et al.(2013)
PDX1_2
0.616
0.696
PDX1
M05161_2.00
Homo sapiens
YTAATKRB
VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_HT-SELEX
0.616
0.696
PDX1
M09147_2.00
Homo sapiens
TGATWGATK
MATCWATCA
Misc
Kulakovskiy et al.(2013)
PDX1_HUMAN.H11MO.0.A
0.616
0.696
Pdx1
M09192_2.00
Mus musculus
VYTAATGRB
VYCATTARB
Misc
Kulakovskiy et al.(2013)
PDX1_MOUSE.H11MO.0.B
0.616
0.696
Pdx1
M09571_2.00
Mus musculus
TGATTRATKR
YMATYAATCA
Misc
Heinz et al.(2010)
Islet-Pdx1_SRA008281
0.616
0.696
PDX1
M10699_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_01
0.616
0.696
PDX1
M10700_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_02
0.616
0.696
PDX1
M10701_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_03
0.616
0.696
PDX1
M10702_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_04
0.616
0.696
PDX1
M10703_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_05
0.616
0.696
PDX1
M10704_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4_01
0.616
0.696
PDX1
M10705_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4
0.616
0.696
PDX1
M10706_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5_01
0.616
0.696
PDX1
M10707_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5
0.616
0.696
PDX1
M10708_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q6
0.616
0.696
PDX1
M05162_2.00
Homo sapiens
HTAAYGAB
VTCRTTAD
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_1
0.616
0.696
PDX1
M05163_2.00
Homo sapiens
YTAATKRB
VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_2
0.616
0.696
Q0N4M8_NEMVE
M02166_2.00
Nematostella vectensis
HTAATKAC
GTMATTAD
PBM
Weirauch et al.(2014)
pTH6215
0.601
0.714
Hoxd3
M00531_2.00
Mus musculus
NTAATNDN
NHNATTAN
PBM
Berger et al.(2008)
Hoxd3_1742
0.600
0.714
Hoxa3
M00172_2.00
Mus musculus
NTAATKRNNN
NNNYMATTAN
PBM
Badis et al.(2009)
Hoxa3_2783
0.600
0.714
Hoxa3
M00532_2.00
Mus musculus
NTAATKRNN
NNYMATTAN
PBM
Berger et al.(2008)
Hoxa3_2783
0.600
0.714
Hoxd3
M03287_2.00
Mus musculus
NNTAATKRNN
NNYMATTANN
SELEX
Jolma et al.(2013)
Hoxd3_1
0.600
0.714
HOXD3
M05101_2.00
Homo sapiens
CTAATTAS
STAATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_HT-SELEX
0.600
0.714
HOXA3
M10651_2.00
Homo sapiens
SVTWNDDKB
VMHHNWABS
Transfac
Matys et al.(2006)
V$HOXA3_01
0.600
0.714
HOXD3
M05102_2.00
Homo sapiens
YTAAYGAY
RTCRTTAR
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_1
0.600
0.714
HOXD3
M05103_2.00
Homo sapiens
CTAATKAC
GTMATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_2
0.600
0.714
Hoxb3
M00504_2.00
Mus musculus
NTAATKRNN
NNYMATTAN
PBM
Berger et al.(2008)
Hoxb3_1720
0.600
0.696
HOXB3
M03126_2.00
Homo sapiens
NBTAATKRNN
NNYMATTAVN
SELEX
Jolma et al.(2013)
HOXB3_1
0.600
0.696
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000019600
Homeodomain
131
186
KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWW
Links
Other
Homeodomain
family TFs
Other
Felis catus
TFs
1707 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy