RHOXF1 (Homo sapiens)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSG00000101883 T209781_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
This gene is a member of the PEPP subfamily of paired-like homoebox genes. The gene may be regulated by androgens and epigenetic mechanisms. The encoded nuclear protein is likely a transcription factor that may play a role in human reproduction. [provided by RefSeq, Dec 2012]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RHOXF1
M03089_2.00		 Homo sapiens
RGATNAKCY
RGMTNATCY		 SELEX
Jolma et al.(2013)
RHOXF1_1		 (Direct) (Direct)
RHOXF1
M03090_2.00		 Homo sapiens
NTRAKCCN
NGGMTYAN		 SELEX
Jolma et al.(2013)
RHOXF1_2		 (Direct) (Direct)
RHOXF1
M03091_2.00		 Homo sapiens
VGMTHAKCC
GGMTDAKCB		 SELEX
Jolma et al.(2013)
RHOXF1_3		 (Direct) (Direct)
RHOXF1
M03092_2.00		 Homo sapiens
NTRAKCCH
DGGMTYAN		 SELEX
Jolma et al.(2013)
RHOXF1_4		 (Direct) (Direct)
RHOXF1
M04947_2.00		 Homo sapiens
NTRATCCN
NGGATYAN		 SELEX
Yin et al.(2017)
RHOXF1_FL_HT-SELEX		 (Direct) (Direct)
RHOXF1
M04948_2.00		 Homo sapiens
NTRATCCN
NGGATYAN		 SELEX
Yin et al.(2017)
RHOXF1_FL_Methyl-HT-SELEX		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
dharma
M02080_2.00 		Danio rerio
NNRAKCY
RGMTYNN		 PBM
Weirauch et al.(2014)
pTH6530 		0.670 0.561
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000217999 Homeodomain 104 160

Links

Other Homeodomain family TFs
Other Homo sapiens TFs

Invalid Input OrderBy

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action