POU6F1 (Homo sapiens)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00157 (Pou) IPR000327 ENSG00000184271 T209926_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
POU6F1
M02094_2.00
Homo sapiens
VNTAATTANB

VNTAATTANB
PBM
Weirauch et al.(2014)
pTH6519
(Direct) (Direct)
POU6F1
M05349_2.00
Homo sapiens
NATTATGNNNNVSATAATN

NATTATSBNNNNCATAATN
SELEX
Yin et al.(2017)
POU6F1_FL_HT-SELEX_1
(Direct) (Direct)
POU6F1
M05350_2.00
Homo sapiens
NTAATKABRTRBNN

NNVYAYVTMATTAN
SELEX
Yin et al.(2017)
POU6F1_FL_HT-SELEX_2
(Direct) (Direct)
POU6F1
M05351_2.00
Homo sapiens
DTAATGAKNN

NNMTCATTAH
SELEX
Yin et al.(2017)
POU6F1_FL_HT-SELEX_3
(Direct) (Direct)
POU6F1
M05352_2.00
Homo sapiens
TATGCNNNGCATA

TATGCNNNGCATA
SELEX
Yin et al.(2017)
POU6F1_FL_HT-SELEX_4
(Direct) (Direct)
POU6F1
M05353_2.00
Homo sapiens
NTAATGAKATGCRN

NYGCATMTCATTAN
SELEX
Yin et al.(2017)
POU6F1_FL_Methyl-HT-SELEX_1
(Direct) (Direct)
POU6F1
M05354_2.00
Homo sapiens
DTAATGAGVD

HBCTCATTAH
SELEX
Yin et al.(2017)
POU6F1_FL_Methyl-HT-SELEX_2
(Direct) (Direct)
POU6F1
M05355_2.00
Homo sapiens
DTATGHTAATKAKN

NMTMATTADCATAH
SELEX
Yin et al.(2017)
POU6F1_FL_Methyl-HT-SELEX_3
(Direct) (Direct)
POU6F1
M05356_2.00
Homo sapiens
TAATKAKNNNTAATKA

TMATTANNNMTMATTA
SELEX
Yin et al.(2017)
POU6F1_FL_Methyl-HT-SELEX_4
(Direct) (Direct)
POU6F1
M10746_2.00
Homo sapiens
GCATAAWTTAT

ATAAWTTATGC
Transfac
Matys et al.(2006)
V$POU6F1_01
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
pdm3
M02127_2.00
Drosophila melanogaster
CTAATTAN

NTAATTAG
PBM
Weirauch et al.(2014)
pTH6769
0.703 0.684
Pou1f1
M02238_2.00
Mus musculus
NTAATKHNN

NNDMATTAN
PBM
Weirauch et al.(2014)
pTH6507
0.637 0.526
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02094_2.00 Homeodomain 1 57

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000330190 POU 142 213
ENSP00000330190 Homeodomain 235 291
ENSP00000373895 POU 142 213
ENSP00000373895 Homeodomain 235 291
ENSP00000448389 Homeodomain 235 291

Links

Other Homeodomain family TFs
Other Homo sapiens TFs

Invalid Input OrderBy

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action