ARGFX (Homo sapiens)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSG00000186103 T209932_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Homeobox genes encode DNA-binding proteins, many of which are thought to be involved in early embryonic development. Homeobox genes encode a DNA-binding domain of 60 to 63 amino acids referred to as the homeodomain. This gene is a member of the ARGFX homeobox gene family. [provided by RefSeq, Jul 2008]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARGFX
M05369_2.00		 Homo sapiens
NYTAATTARH
DYTAATTARN		 SELEX
Yin et al.(2017)
ARGFX_eDBD_HT-SELEX_1		 (Direct) (Direct)
ARGFX
M05370_2.00		 Homo sapiens
HTAATYTAATTAR
YTAATTARATTAD		 SELEX
Yin et al.(2017)
ARGFX_eDBD_HT-SELEX_2		 (Direct) (Direct)
ARGFX
M05371_2.00		 Homo sapiens
NYTAATTAGH
DCTAATTARN		 SELEX
Yin et al.(2017)
ARGFX_eDBD_Methyl-HT-SELEX_1		 (Direct) (Direct)
ARGFX
M05372_2.00		 Homo sapiens
HTAATYTAATTAR
YTAATTARATTAD		 SELEX
Yin et al.(2017)
ARGFX_eDBD_Methyl-HT-SELEX_2		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000335578 Homeodomain 79 135

Links

Other Homeodomain family TFs
Other Homo sapiens TFs

Invalid Input OrderBy

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action