|
HOXC6
(Homo sapiens)
Homeodomain
|
TF Information |
Pfam ID |
Interpro ID |
Gene ID |
CIS-BP ID |
Sequence source |
Animal TF db |
PF00046 (Homeobox) |
IPR001356 |
ENSG00000197757 |
T209938_2.00 |
Ensembl (2018-Dec-8) |
Link out |
NCBI Gene Info:This gene belongs to the homeobox family, members of which encode a highly conserved family of transcription factors that play an important role in morphogenesis in all multicellular organisms. Mammals possess four similar homeobox gene clusters, HOXA, HOXB, HOXC and HOXD, which are located on different chromosomes and consist of 9 to 11 genes arranged in tandem. This gene, HOXC6, is one of several HOXC genes located in a cluster on chromosome 12. Three genes, HOXC5, HOXC4 and HOXC6, share a 5' non-coding exon. Transcripts may include the shared exon spliced to the gene-specific exons, or they may include only the gene-specific exons. Alternatively spliced transcript variants encoding different isoforms have been identified for HOXC6. Transcript variant two includes the shared exon, and transcript variant one includes only gene-specific exons. [provided by RefSeq, Jul 2008] |
Directly determined binding motifs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
No direct experiments |
|
|
|
|
|
Motifs from related TFs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
Hoxc6
M00392_2.00 |
Mus musculus |
TTAATTAB |
VTAATTAA |
PBM
Berger et al.(2008)
Hoxc6_3954
|
0.867
|
1.000
|
Hoxa6
M00494_2.00 |
Mus musculus |
NWWATKRNN |
NNYMATWWN |
PBM
Berger et al.(2008)
Hoxa6_1040
|
0.854
|
0.965
|
HOXA6
M04974_2.00 |
Homo sapiens |
NNTAATKRVN |
NBYMATTANN |
SELEX
Yin et al.(2017)
HOXA6_eDBD_HT-SELEX
|
0.854
|
0.965
|
HOXA6
M04975_2.00 |
Homo sapiens |
NNTAATKRBN |
NVYMATTANN |
SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_1
|
0.854
|
0.965
|
HOXA6
M04976_2.00 |
Homo sapiens |
NTAAYGRY |
RYCRTTAN |
SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_2
|
0.854
|
0.965
|
Hoxb6
M00381_2.00 |
Mus musculus |
NNDHNNN |
NNNDHNN |
PBM
Berger et al.(2008)
Hoxb6_3428
|
0.849
|
0.930
|
HOXB6
M04999_2.00 |
Homo sapiens |
NTAATKRY |
RYMATTAN |
SELEX
Yin et al.(2017)
HOXB6_eDBD_HT-SELEX
|
0.849
|
0.930
|
HOXB6
M05000_2.00 |
Homo sapiens |
HTAAYGAY |
RTCRTTAD |
SELEX
Yin et al.(2017)
HOXB6_eDBD_Methyl-HT-SELEX_1
|
0.849
|
0.930
|
HOXB6
M05001_2.00 |
Homo sapiens |
NTWATKRB |
VYMATWAN |
SELEX
Yin et al.(2017)
HOXB6_eDBD_Methyl-HT-SELEX_2
|
0.849
|
0.930
|
Hoxb8
M00517_2.00 |
Mus musculus |
NWWAYNDNN |
NNHNRTWWN |
PBM
Berger et al.(2008)
Hoxb8_3780
|
0.840
|
0.842
|
HOXB8
M05048_2.00 |
Homo sapiens |
NTAATKRM |
KYMATTAN |
SELEX
Yin et al.(2017)
HOXB8_eDBD_HT-SELEX
|
0.840
|
0.842
|
HOXB8
M09141_2.00 |
Homo sapiens |
BMATHAATCAA |
TTGATTDATKV |
Misc
Kulakovskiy et al.(2013)
HXB8_HUMAN.H11MO.0.C
|
0.840
|
0.842
|
Hoxb8
M09214_2.00 |
Mus musculus |
BMATHAATCAA |
TTGATTDATKV |
Misc
Kulakovskiy et al.(2013)
HXB8_MOUSE.H11MO.0.C
|
0.840
|
0.842
|
HOXB8
M05049_2.00 |
Homo sapiens |
NTAATKRN |
NYMATTAN |
SELEX
Yin et al.(2017)
HOXB8_eDBD_Methyl-HT-SELEX_1
|
0.840
|
0.842
|
HOXB8
M05050_2.00 |
Homo sapiens |
NTAAYGAY |
RTCRTTAN |
SELEX
Yin et al.(2017)
HOXB8_eDBD_Methyl-HT-SELEX_2
|
0.840
|
0.842
|
HOXD8
M03221_2.00 |
Homo sapiens |
VHWAATKWDN |
NHWMATTWDB |
SELEX
Jolma et al.(2013)
HOXD8_1
|
0.840
|
0.825
|
HOXD8
M05310_2.00 |
Homo sapiens |
BTAATKRY |
RYMATTAV |
SELEX
Yin et al.(2017)
HOXD8_eDBD_HT-SELEX
|
0.840
|
0.825
|
HOXD8
M05311_2.00 |
Homo sapiens |
NTAATKRN |
NYMATTAN |
SELEX
Yin et al.(2017)
HOXD8_eDBD_Methyl-HT-SELEX_1
|
0.840
|
0.825
|
HOXD8
M05312_2.00 |
Homo sapiens |
NTWAYGRY |
RYCRTWAN |
SELEX
Yin et al.(2017)
HOXD8_eDBD_Methyl-HT-SELEX_2
|
0.840
|
0.825
|
abd-A
M03770_2.00 |
Drosophila melanogaster |
NNTAATKRCN |
NGYMATTANN |
SELEX
Nitta et al.(2015)
abd-A_1
|
0.833
|
0.895
|
abd-A
M03771_2.00 |
Drosophila melanogaster |
NNTAATKRCN |
NGYMATTANN |
SELEX
Nitta et al.(2015)
abd-A_2
|
0.833
|
0.895
|
abd-A
M06475_2.00 |
Drosophila melanogaster |
TTAATKA |
TMATTAA |
B1H
Mathelier et al.(2014)
MA0206.1
|
0.833
|
0.895
|
abd-A
M06210_2.00 |
Drosophila melanogaster |
WTWATKDM |
KHMATWAW |
B1H
Zhu et al.(2011)
Abd-A_FlyReg_FBgn0000014
|
0.833
|
0.895
|
abd-A
M09671_2.00 |
Drosophila melanogaster |
HTAATKRH |
DYMATTAD |
Misc
Kulakovskiy et al.(2009)
abd-A
|
0.833
|
0.895
|
abd-A
M10778_2.00 |
Drosophila melanogaster |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
I$ABDA_Q6
|
0.833
|
0.895
|
Hoxd8
M00436_2.00 |
Mus musculus |
NNWWYNNN |
NNNRWWNN |
PBM
Berger et al.(2008)
Hoxd8_2644
|
0.828
|
0.807
|
Ubx
M00558_2.00 |
Drosophila melanogaster |
NWWAYDDNN |
NNHHRTWWN |
PBM
Busser et al.(2012a)
Ubx
|
0.824
|
0.877
|
Ubx
M03804_2.00 |
Drosophila melanogaster |
NTAATKRH |
DYMATTAN |
SELEX
Nitta et al.(2015)
Ubx_1
|
0.824
|
0.877
|
Ubx
M06499_2.00 |
Drosophila melanogaster |
NTTAATKR |
YMATTAAN |
B1H
Mathelier et al.(2014)
MA0094.2
|
0.824
|
0.877
|
Ubx
M06273_2.00 |
Drosophila melanogaster |
NTTAATKR |
YMATTAAN |
B1H
Zhu et al.(2011)
Ubx_Cell_FBgn0003944
|
0.824
|
0.877
|
Ubx
M06274_2.00 |
Drosophila melanogaster |
TAATKD |
HMATTA |
B1H
Zhu et al.(2011)
Ubx_FlyReg_FBgn0003944
|
0.824
|
0.877
|
Ubx
M06275_2.00 |
Drosophila melanogaster |
NTTWATKR |
YMATWAAN |
B1H
Zhu et al.(2011)
Ubx_SOLEXA_FBgn0003944
|
0.824
|
0.877
|
Ubx
M09680_2.00 |
Drosophila melanogaster |
TTAATKR |
YMATTAA |
Misc
Kulakovskiy et al.(2009)
Ubx
|
0.824
|
0.877
|
Ubx
M10788_2.00 |
Drosophila melanogaster |
NNVNNNNTAATKRNBHNND |
HNNDVNYMATTANNNNBNN |
Transfac
Matys et al.(2006)
I$UBX_01
|
0.824
|
0.877
|
Hoxa7
M00476_2.00 |
Mus musculus |
NNWAYNDNN |
NNHNRTWNN |
PBM
Berger et al.(2008)
Hoxa7_2668
|
0.822
|
0.930
|
Hoxa7
M00477_2.00 |
Mus musculus |
NYHHYNNNN |
NNNNRDDRN |
PBM
Berger et al.(2008)
Hoxa7_3750
|
0.822
|
0.930
|
HOXA7
M05069_2.00 |
Homo sapiens |
NTAATKRV |
BYMATTAN |
SELEX
Yin et al.(2017)
HOXA7_eDBD_HT-SELEX
|
0.822
|
0.930
|
Antp
M06549_2.00 |
Drosophila melanogaster |
TTAATKA |
TMATTAA |
B1H
Mathelier et al.(2014)
MA0166.1
|
0.822
|
0.930
|
Antp
M06374_2.00 |
Drosophila melanogaster |
YTTAATKA |
TMATTAAR |
B1H
Zhu et al.(2011)
Antp_Cell_FBgn0000095
|
0.822
|
0.930
|
Antp
M06375_2.00 |
Drosophila melanogaster |
WTAATW |
AATTAW |
B1H
Zhu et al.(2011)
Antp_FlyReg_FBgn0000095
|
0.822
|
0.930
|
Antp
M06376_2.00 |
Drosophila melanogaster |
NHTAATKR |
YMATTADN |
B1H
Zhu et al.(2011)
Antp_SOLEXA_FBgn0000095
|
0.822
|
0.930
|
Antp
M09682_2.00 |
Drosophila melanogaster |
TYTTWATKA |
TMATWAARA |
Misc
Kulakovskiy et al.(2009)
Antp
|
0.822
|
0.930
|
Antp
M10789_2.00 |
Drosophila melanogaster |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
I$ANTP_Q6_01
|
0.822
|
0.930
|
HOXA7
M10679_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXA7_01
|
0.822
|
0.930
|
HOXA7
M05070_2.00 |
Homo sapiens |
NTAATKRN |
NYMATTAN |
SELEX
Yin et al.(2017)
HOXA7_eDBD_Methyl-HT-SELEX_1
|
0.822
|
0.930
|
HOXA7
M05071_2.00 |
Homo sapiens |
NTAAYGAY |
RTCRTTAN |
SELEX
Yin et al.(2017)
HOXA7_eDBD_Methyl-HT-SELEX_2
|
0.822
|
0.930
|
Hoxc8
M00391_2.00 |
Mus musculus |
NNDNYNNNN |
NNNNRNHNN |
PBM
Berger et al.(2008)
Hoxc8_3429
|
0.807
|
0.825
|
HOXC8
M04912_2.00 |
Homo sapiens |
NYAATTRN |
NYAATTRN |
SELEX
Yin et al.(2017)
HOXC8_FL_HT-SELEX
|
0.807
|
0.825
|
HOXC8
M10636_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXC8_Q3
|
0.807
|
0.825
|
HOXC8
M04913_2.00 |
Homo sapiens |
NYMATKRN |
NYMATKRN |
SELEX
Yin et al.(2017)
HOXC8_FL_Methyl-HT-SELEX_1
|
0.807
|
0.825
|
HOXC8
M04914_2.00 |
Homo sapiens |
NTWAYGRY |
RYCRTWAN |
SELEX
Yin et al.(2017)
HOXC8_FL_Methyl-HT-SELEX_2
|
0.807
|
0.825
|
HOXB7
M00334_2.00 |
Homo sapiens |
NBRDNNN |
NNNHYVN |
PBM
Barrera et al.(2016)
HOXB7_REF
|
0.806
|
0.895
|
Hoxb7
M00481_2.00 |
Mus musculus |
NNWAYNDN |
NHNRTWNN |
PBM
Berger et al.(2008)
Hoxb7_3953
|
0.806
|
0.895
|
HOXB7
M05404_2.00 |
Homo sapiens |
BTAATKRV |
BYMATTAV |
SELEX
Yin et al.(2017)
HOXB7_eDBD_HT-SELEX
|
0.806
|
0.895
|
HOXB7
M05407_2.00 |
Homo sapiens |
BBTAATTRCN |
NGYAATTAVV |
SELEX
Yin et al.(2017)
HOXB7_FL_HT-SELEX
|
0.806
|
0.895
|
HOXB7
M09166_2.00 |
Homo sapiens |
MATHAATCAW |
WTGATTDATK |
Misc
Kulakovskiy et al.(2013)
HXB7_HUMAN.H11MO.0.C
|
0.806
|
0.895
|
Hoxb7
M09206_2.00 |
Mus musculus |
MATHAATCAW |
WTGATTDATK |
Misc
Kulakovskiy et al.(2013)
HXB7_MOUSE.H11MO.0.C
|
0.806
|
0.895
|
HOXB7
M05405_2.00 |
Homo sapiens |
BTAATKRV |
BYMATTAV |
SELEX
Yin et al.(2017)
HOXB7_eDBD_Methyl-HT-SELEX_1
|
0.806
|
0.895
|
HOXB7
M05406_2.00 |
Homo sapiens |
NTAAYGAY |
RTCRTTAN |
SELEX
Yin et al.(2017)
HOXB7_eDBD_Methyl-HT-SELEX_2
|
0.806
|
0.895
|
HOXB7
M05408_2.00 |
Homo sapiens |
NNTAATKRCN |
NGYMATTANN |
SELEX
Yin et al.(2017)
HOXB7_FL_Methyl-HT-SELEX_1
|
0.806
|
0.895
|
HOXB7
M05409_2.00 |
Homo sapiens |
NTAAYGAY |
RTCRTTAN |
SELEX
Yin et al.(2017)
HOXB7_FL_Methyl-HT-SELEX_2
|
0.806
|
0.895
|
HOXB7
M00333_2.00 |
Homo sapiens |
NHATWTATTN |
NAATAWATDN |
PBM
Barrera et al.(2016)
HOXB7_R189C
|
0.806
|
0.877
|
ftz
M03795_2.00 |
Drosophila melanogaster |
WTAATTRC |
GYAATTAW |
SELEX
Nitta et al.(2015)
ftz_1
|
0.796
|
0.842
|
ftz
M06488_2.00 |
Drosophila melanogaster |
TTAATKA |
TMATTAA |
B1H
Mathelier et al.(2014)
MA0225.1
|
0.796
|
0.842
|
ftz
M06247_2.00 |
Drosophila melanogaster |
VTTAATKA |
TMATTAAB |
B1H
Zhu et al.(2011)
Ftz_Cell_FBgn0001077
|
0.796
|
0.842
|
ftz
M06248_2.00 |
Drosophila melanogaster |
TAATKRNH |
DNYMATTA |
B1H
Zhu et al.(2011)
ftz_FlyReg_FBgn0001077
|
0.796
|
0.842
|
ftz
M06249_2.00 |
Drosophila melanogaster |
BTAATKA |
TMATTAV |
B1H
Zhu et al.(2011)
Ftz_SOLEXA_FBgn0001077
|
0.796
|
0.842
|
ftz
M09679_2.00 |
Drosophila melanogaster |
YTAATKRNN |
NNYMATTAR |
Misc
Kulakovskiy et al.(2009)
ftz
|
0.796
|
0.842
|
ftz
M10787_2.00 |
Drosophila melanogaster |
CTTAATTRBHBB |
VVDVYAATTAAG |
Transfac
Matys et al.(2006)
I$FTZ_01
|
0.796
|
0.842
|
CBG00029
M01240_2.00 |
Caenorhabditis briggsae |
ATTAATTA |
TAATTAAT |
PBM
Lambert et al.(2019)
pTH11471
|
0.773
|
0.737
|
HOXB7
M00331_2.00 |
Homo sapiens |
NNNNNNY |
RNNNNNN |
PBM
Barrera et al.(2016)
HOXB7_K191R
|
0.749
|
0.877
|
Q8I9J5_9BILA
M02214_2.00 |
Spadella cephaloptera |
NVTAWTWABN |
NVTWAWTABN |
PBM
Weirauch et al.(2014)
pTH6164
|
0.745
|
0.702
|
HOXB7
M00332_2.00 |
Homo sapiens |
NDWATATAYN |
NRTATATWHN |
PBM
Barrera et al.(2016)
HOXB7_M190L
|
0.730
|
0.877
|
egl-5
M09581_2.00 |
Caenorhabditis elegans |
DWTTWATGGS |
SCCATWAAWH |
Misc
Heinz et al.(2010)
cElegans-L3-EGL5_modEncode
|
0.705
|
0.544
|
CBG00023
M02062_2.00 |
Caenorhabditis briggsae |
NWWATKDNNN |
NNNHMATWWN |
PBM
Weirauch et al.(2014)
pTH5778
|
0.705
|
0.526
|
Scr
M03799_2.00 |
Drosophila melanogaster |
BTAATKRB |
VYMATTAV |
SELEX
Nitta et al.(2015)
Scr_1
|
0.675
|
0.895
|
Scr
M06496_2.00 |
Drosophila melanogaster |
YTAATKA |
TMATTAR |
B1H
Mathelier et al.(2014)
MA0203.1
|
0.675
|
0.895
|
Scr
M06266_2.00 |
Drosophila melanogaster |
HVYTAATKA |
TMATTARBD |
B1H
Zhu et al.(2011)
Scr_Cell_FBgn0003339
|
0.675
|
0.895
|
Scr
M06267_2.00 |
Drosophila melanogaster |
YTAATKR |
YMATTAR |
B1H
Zhu et al.(2011)
Scr_SOLEXA_FBgn0003339
|
0.675
|
0.895
|
Hoxa5
M00478_2.00 |
Mus musculus |
NTAATNDNN |
NNHNATTAN |
PBM
Berger et al.(2008)
Hoxa5_3415
|
0.675
|
0.877
|
Hoxb5
M00480_2.00 |
Mus musculus |
NWDWTNNNN |
NNNNAWHWN |
PBM
Berger et al.(2008)
Hoxb5_3122
|
0.675
|
0.877
|
HOXB5
M03125_2.00 |
Homo sapiens |
NNKAATKRNN |
NNYMATTMNN |
SELEX
Jolma et al.(2013)
HOXB5_1
|
0.675
|
0.877
|
HOXA5
M04968_2.00 |
Homo sapiens |
STAATKRS |
SYMATTAS |
SELEX
Yin et al.(2017)
HOXA5_eDBD_HT-SELEX
|
0.675
|
0.877
|
HOXA5
M04971_2.00 |
Homo sapiens |
NTMATKRB |
VYMATKAN |
SELEX
Yin et al.(2017)
HOXA5_FL_HT-SELEX
|
0.675
|
0.877
|
HOXB5
M05051_2.00 |
Homo sapiens |
NTAATKRV |
BYMATTAN |
SELEX
Yin et al.(2017)
HOXB5_eDBD_HT-SELEX
|
0.675
|
0.877
|
HOXB5
M05054_2.00 |
Homo sapiens |
STMATKAB |
VTMATKAS |
SELEX
Yin et al.(2017)
HOXB5_FL_HT-SELEX
|
0.675
|
0.877
|
HOXA5
M10652_2.00 |
Homo sapiens |
NGRDBKBDHNBAVTAATKRRGRDVDDDGSR |
YSCHHHBHYCYYMATTABTVNDHVMVHYCN |
Transfac
Matys et al.(2006)
V$HOX13_01
|
0.675
|
0.877
|
HOXA5
M08457_2.00 |
Homo sapiens |
CDBWAATK |
MATTWVHG |
COMPILED
Mathelier et al.(2014)
MA0158.1
|
0.675
|
0.877
|
HOXA5
M04969_2.00 |
Homo sapiens |
BTAATKRV |
BYMATTAV |
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_1
|
0.675
|
0.877
|
HOXA5
M04970_2.00 |
Homo sapiens |
NTAAYGAY |
RTCRTTAN |
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_2
|
0.675
|
0.877
|
HOXA5
M04972_2.00 |
Homo sapiens |
NTMATKRN |
NYMATKAN |
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_1
|
0.675
|
0.877
|
HOXA5
M04973_2.00 |
Homo sapiens |
NTAAYGAY |
RTCRTTAN |
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_2
|
0.675
|
0.877
|
HOXB5
M05052_2.00 |
Homo sapiens |
NTMATKRN |
NYMATKAN |
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_1
|
0.675
|
0.877
|
HOXB5
M05053_2.00 |
Homo sapiens |
NTAAYGAY |
RTCRTTAN |
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_2
|
0.675
|
0.877
|
HOXB5
M05055_2.00 |
Homo sapiens |
NTMATKAB |
VTMATKAN |
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_1
|
0.675
|
0.877
|
HOXB5
M05056_2.00 |
Homo sapiens |
HTAAYGAY |
RTCRTTAD |
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_2
|
0.675
|
0.877
|
Hoxc5
M00422_2.00 |
Mus musculus |
NWRATND |
HNATYWN |
PBM
Berger et al.(2008)
Hoxc5_2630
|
0.664
|
0.877
|
CBG23031
M01245_2.00 |
Caenorhabditis briggsae |
NTTWATKRNN |
NNYMATWAAN |
PBM
Lambert et al.(2019)
pTH11458
|
0.649
|
0.509
|
Hoxc9
M00470_2.00 |
Mus musculus |
NGTAATWAAN |
NTTWATTACN |
PBM
Berger et al.(2008)
Hoxc9_2367
|
0.630
|
0.719
|
Hoxd9
M03282_2.00 |
Mus musculus |
TTTWATKKB |
VMMATWAAA |
SELEX
Jolma et al.(2013)
Hoxd9_1
|
0.630
|
0.719
|
Hoxd9
M03283_2.00 |
Mus musculus |
DWTTWATKRY |
RYMATWAAWH |
SELEX
Jolma et al.(2013)
Hoxd9_2
|
0.630
|
0.719
|
Hoxd9
M03284_2.00 |
Mus musculus |
DTTWAYGRB |
VYCRTWAAH |
SELEX
Jolma et al.(2013)
Hoxd9_3
|
0.630
|
0.719
|
HOXC9
M05331_2.00 |
Homo sapiens |
GTCGTAAAAN |
NTTTTACGAC |
SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_1
|
0.630
|
0.719
|
HOXC9
M05332_2.00 |
Homo sapiens |
NTTTTATKRC |
GYMATAAAAN |
SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_2
|
0.630
|
0.719
|
HOXD9
M05104_2.00 |
Homo sapiens |
NTTTTATKRC |
GYMATAAAAN |
SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_1
|
0.630
|
0.719
|
HOXD9
M05105_2.00 |
Homo sapiens |
RTCRTAAAWN |
NWTTTAYGAY |
SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_2
|
0.630
|
0.719
|
HOXD9
M05108_2.00 |
Homo sapiens |
RTCGTAAAWN |
NWTTTACGAY |
SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_1
|
0.630
|
0.719
|
HOXD9
M05109_2.00 |
Homo sapiens |
NTTTTATKRC |
GYMATAAAAN |
SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_2
|
0.630
|
0.719
|
Hoxc9
M08137_2.00 |
Mus musculus |
NWGATTTATDGSH |
DSCHATAAATCWN |
ChIP-seq
Mathelier et al.(2014)
MA0485.1
|
0.630
|
0.719
|
HOXC9
M09161_2.00 |
Homo sapiens |
HTTWATKGCH |
DGCMATWAAD |
Misc
Kulakovskiy et al.(2013)
HXC9_HUMAN.H11MO.0.C
|
0.630
|
0.719
|
Hoxc9
M09574_2.00 |
Mus musculus |
TGATTTATDGCH |
DGCHATAAATCA |
Misc
Heinz et al.(2010)
Ainv15-Hoxc9_GSE21812
|
0.630
|
0.719
|
HOXD9
M10686_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXD9_Q2
|
0.630
|
0.719
|
HOXC9
M05333_2.00 |
Homo sapiens |
RTCGTAAAHN |
NDTTTACGAY |
SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_1
|
0.630
|
0.719
|
HOXC9
M05334_2.00 |
Homo sapiens |
NTTTWATKRC |
GYMATWAAAN |
SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_2
|
0.630
|
0.719
|
HOXD9
M05106_2.00 |
Homo sapiens |
NNTTWATKRC |
GYMATWAANN |
SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_1
|
0.630
|
0.719
|
HOXD9
M05107_2.00 |
Homo sapiens |
RTCGTAAANN |
NNTTTACGAY |
SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_2
|
0.630
|
0.719
|
HOXD9
M05110_2.00 |
Homo sapiens |
RTCGTAAANN |
NNTTTACGAY |
SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_1
|
0.630
|
0.719
|
HOXD9
M05111_2.00 |
Homo sapiens |
NDTTWATKRC |
GYMATWAAHN |
SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_2
|
0.630
|
0.719
|
Hoxb9
M00410_2.00 |
Mus musculus |
NTTWAYDDNN |
NNHHRTWAAN |
PBM
Berger et al.(2008)
Hoxb9_3413
|
0.630
|
0.702
|
Hoxa9
M00475_2.00 |
Mus musculus |
NNDDBNNN |
NNNVHHNN |
PBM
Berger et al.(2008)
Hoxa9_2622
|
0.630
|
0.702
|
HOXA9
M03085_2.00 |
Homo sapiens |
NNDTTWAYGAYN |
NRTCRTWAAHNN |
SELEX
Jolma et al.(2013)
HOXA10_1
|
0.630
|
0.702
|
HOXA9
M03086_2.00 |
Homo sapiens |
NDTTWATKRYN |
NRYMATWAAHN |
SELEX
Jolma et al.(2013)
HOXA10_2
|
0.630
|
0.702
|
HOXA9
M04932_2.00 |
Homo sapiens |
NNDWWABKRC |
GYMVTWWHNN |
SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_1
|
0.630
|
0.702
|
HOXA9
M04933_2.00 |
Homo sapiens |
NNDTWAYGRB |
VYCRTWAHNN |
SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_2
|
0.630
|
0.702
|
HOXB9
M05289_2.00 |
Homo sapiens |
RTCRTAAAWN |
NWTTTAYGAY |
SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_1
|
0.630
|
0.702
|
HOXB9
M05290_2.00 |
Homo sapiens |
NTTTWATKRC |
GYMATWAAAN |
SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_2
|
0.630
|
0.702
|
Hoxa9
M08138_2.00 |
Mus musculus |
TGATTKATKRB |
VYMATMAATCA |
ChIP-seq
Mathelier et al.(2014)
MA0594.1
|
0.630
|
0.702
|
HOXA9
M09130_2.00 |
Homo sapiens |
DCATAAAYYRBH |
DVYRRTTTATGH |
Misc
Kulakovskiy et al.(2013)
HXA10_HUMAN.H11MO.0.C
|
0.630
|
0.702
|
HOXA9
M09131_2.00 |
Homo sapiens |
HHATAAATCAH |
DTGATTTATDD |
Misc
Kulakovskiy et al.(2013)
HXA9_HUMAN.H11MO.0.B
|
0.630
|
0.702
|
Hoxa9
M09203_2.00 |
Mus musculus |
HHATAAATCAH |
DTGATTTATDD |
Misc
Kulakovskiy et al.(2013)
HXA9_MOUSE.H11MO.0.B
|
0.630
|
0.702
|
Hoxa9
M09575_2.00 |
Mus musculus |
WGATTKATDRBY |
RVYHATMAATCW |
Misc
Heinz et al.(2010)
HSC-Hoxa9_GSE33509
|
0.630
|
0.702
|
HOXA9
M10642_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXA10_Q6
|
0.630
|
0.702
|
HOXA9
M10643_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXA9_04
|
0.630
|
0.702
|
HOXA9
M10644_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXA9_Q5_01
|
0.630
|
0.702
|
HOXA9
M10645_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXA9_Q5
|
0.630
|
0.702
|
HOXB9
M05291_2.00 |
Homo sapiens |
GTCGTAAAHB |
VDTTTACGAC |
SELEX
Yin et al.(2017)
HOXB9_eDBD_Methyl-HT-SELEX
|
0.630
|
0.702
|
HOXA9
M04934_2.00 |
Homo sapiens |
NNDTWAYKRC |
GYMRTWAHNN |
SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_1
|
0.630
|
0.702
|
HOXA9
M04935_2.00 |
Homo sapiens |
NNDTWACGAY |
RTCGTWAHNN |
SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_2
|
0.630
|
0.702
|
ceh-19
M02180_2.00 |
Caenorhabditis elegans |
NTWAWDRNN |
NNYHWTWAN |
PBM
Weirauch et al.(2014)
pTH5661
|
0.629
|
0.544
|
CG34031
M02126_2.00 |
Drosophila melanogaster |
NNNDNNRN |
NYNNHNNN |
PBM
Weirauch et al.(2014)
pTH6447
|
0.629
|
0.526
|
CG34031
M06548_2.00 |
Drosophila melanogaster |
TTAATWG |
CWATTAA |
B1H
Mathelier et al.(2014)
MA0444.1
|
0.629
|
0.526
|
CG34031
M06372_2.00 |
Drosophila melanogaster |
BTTAATWG |
CWATTAAV |
B1H
Zhu et al.(2011)
CG34031_Cell_FBgn0054031
|
0.629
|
0.526
|
CG34031
M06373_2.00 |
Drosophila melanogaster |
NTTAATDR |
YHATTAAN |
B1H
Zhu et al.(2011)
CG34031_SOLEXA_FBgn0054031
|
0.629
|
0.526
|
Hoxb4
M00479_2.00 |
Mus musculus |
NTAATNDNN |
NNHNATTAN |
PBM
Berger et al.(2008)
Hoxb4_2627
|
0.626
|
0.807
|
HOXB4
M05343_2.00 |
Homo sapiens |
YTAATKAY |
RTMATTAR |
SELEX
Yin et al.(2017)
HOXB4_FL_HT-SELEX
|
0.626
|
0.807
|
HOXB4
M09162_2.00 |
Homo sapiens |
YTAATKRS |
SYMATTAR |
Misc
Kulakovskiy et al.(2013)
HXB4_HUMAN.H11MO.0.B
|
0.626
|
0.807
|
Hoxb4
M09204_2.00 |
Mus musculus |
YTAATKRS |
SYMATTAR |
Misc
Kulakovskiy et al.(2013)
HXB4_MOUSE.H11MO.0.A
|
0.626
|
0.807
|
Hoxb4
M09576_2.00 |
Mus musculus |
TGATDRATKRSN |
NSYMATYHATCA |
Misc
Heinz et al.(2010)
ES-Hoxb4_GSE34014
|
0.626
|
0.807
|
HOXB4
M05344_2.00 |
Homo sapiens |
HTAAYGAY |
RTCRTTAD |
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_1
|
0.626
|
0.807
|
HOXB4
M05345_2.00 |
Homo sapiens |
HTAAYKAB |
VTMRTTAD |
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_2
|
0.626
|
0.807
|
Abd-B
M00554_2.00 |
Drosophila melanogaster |
NWTWAYDDNN |
NNHHRTWAWN |
PBM
Busser et al.(2012a)
Abd-B
|
0.620
|
0.649
|
Abd-B
M03772_2.00 |
Drosophila melanogaster |
DRTCRTAAAWH |
DWTTTAYGAYH |
SELEX
Nitta et al.(2015)
Abd-B_1
|
0.620
|
0.649
|
Abd-B
M03773_2.00 |
Drosophila melanogaster |
DTTTTATKRCY |
RGYMATAAAAH |
SELEX
Nitta et al.(2015)
Abd-B_2
|
0.620
|
0.649
|
Abd-B
M03774_2.00 |
Drosophila melanogaster |
NKCARYAACGACYW |
WRGTCGTTRYTGMN |
SELEX
Nitta et al.(2015)
Abd-B_3
|
0.620
|
0.649
|
Abd-B
M03775_2.00 |
Drosophila melanogaster |
DTTTWATGKSTTTY |
RAAASMCATWAAAH |
SELEX
Nitta et al.(2015)
Abd-B_4
|
0.620
|
0.649
|
Abd-B
M06476_2.00 |
Drosophila melanogaster |
TTTATKR |
YMATAAA |
B1H
Mathelier et al.(2014)
MA0165.1
|
0.620
|
0.649
|
Abd-B
M06211_2.00 |
Drosophila melanogaster |
YCATAAAA |
TTTTATGR |
B1H
Zhu et al.(2011)
Abd-B_FlyReg_FBgn0000015
|
0.620
|
0.649
|
Abd-B
M09672_2.00 |
Drosophila melanogaster |
YMATAAAAHH |
DDTTTTATKR |
Misc
Kulakovskiy et al.(2009)
Abd-B
|
0.620
|
0.649
|
Abd-B
M10779_2.00 |
Drosophila melanogaster |
VSNTTDATKRCNNN |
NNNGYMATHAANSB |
Transfac
Matys et al.(2006)
I$ABDB_01
|
0.620
|
0.649
|
Abd-B
M10780_2.00 |
Drosophila melanogaster |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
I$ABDB_Q6
|
0.620
|
0.649
|
HOXD4
M05273_2.00 |
Homo sapiens |
NTMATKRV |
BYMATKAN |
SELEX
Yin et al.(2017)
HOXD4_eDBD_HT-SELEX
|
0.619
|
0.825
|
HOXD4
M05276_2.00 |
Homo sapiens |
NTAATKRB |
VYMATTAN |
SELEX
Yin et al.(2017)
HOXD4_FL_HT-SELEX
|
0.619
|
0.825
|
HOXD4
M05274_2.00 |
Homo sapiens |
NTMATKRN |
NYMATKAN |
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_1
|
0.619
|
0.825
|
HOXD4
M05275_2.00 |
Homo sapiens |
NTAAYGAY |
RTCRTTAN |
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_2
|
0.619
|
0.825
|
HOXD4
M05277_2.00 |
Homo sapiens |
NTAATKRN |
NYMATTAN |
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_1
|
0.619
|
0.825
|
HOXD4
M05278_2.00 |
Homo sapiens |
NTAAYGAY |
RTCRTTAN |
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_2
|
0.619
|
0.825
|
Hoxa4
M00383_2.00 |
Mus musculus |
NTAATBDNN |
NNHVATTAN |
PBM
Berger et al.(2008)
Hoxa4_3426
|
0.619
|
0.807
|
HOXA4
M05381_2.00 |
Homo sapiens |
NTAATKRY |
RYMATTAN |
SELEX
Yin et al.(2017)
HOXA4_eDBD_HT-SELEX
|
0.619
|
0.807
|
HOXA4
M10755_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXA4_Q2
|
0.619
|
0.807
|
HOXA4
M05382_2.00 |
Homo sapiens |
NTAAYGAY |
RTCRTTAN |
SELEX
Yin et al.(2017)
HOXA4_eDBD_Methyl-HT-SELEX
|
0.619
|
0.807
|
HOXC4
M00330_2.00 |
Homo sapiens |
YTAATTRB |
VYAATTAR |
PBM
Barrera et al.(2016)
HOXC4_REF
|
0.614
|
0.807
|
Hoxc4
M00530_2.00 |
Mus musculus |
NWAATNDNN |
NNHNATTWN |
PBM
Berger et al.(2008)
Hoxc4_3491
|
0.614
|
0.807
|
HOXC4
M05385_2.00 |
Homo sapiens |
NTAATKRN |
NYMATTAN |
SELEX
Yin et al.(2017)
HOXC4_FL_HT-SELEX
|
0.614
|
0.807
|
HOXC4
M05386_2.00 |
Homo sapiens |
NTAATKRN |
NYMATTAN |
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_1
|
0.614
|
0.807
|
HOXC4
M05387_2.00 |
Homo sapiens |
NTAAYGAY |
RTCRTTAN |
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_2
|
0.614
|
0.807
|
HOXC4
M00328_2.00 |
Homo sapiens |
YTAATTAB |
VTAATTAR |
PBM
Barrera et al.(2016)
HOXC4_N178S
|
0.614
|
0.789
|
Dfd
M03784_2.00 |
Drosophila melanogaster |
VNTAAYKRBN |
NVYMRTTANB |
SELEX
Nitta et al.(2015)
Dfd_1
|
0.612
|
0.789
|
Dfd
M03785_2.00 |
Drosophila melanogaster |
VYTAATKAYN |
NRTMATTARB |
SELEX
Nitta et al.(2015)
Dfd_2
|
0.612
|
0.789
|
Dfd
M06481_2.00 |
Drosophila melanogaster |
YTAATGA |
TCATTAR |
B1H
Mathelier et al.(2014)
MA0186.1
|
0.612
|
0.789
|
Dfd
M06226_2.00 |
Drosophila melanogaster |
VYTAATGA |
TCATTAAB |
B1H
Zhu et al.(2011)
Dfd_Cell_FBgn0000439
|
0.612
|
0.789
|
Dfd
M06227_2.00 |
Drosophila melanogaster |
TTAATKRY |
RYMATTAA |
B1H
Zhu et al.(2011)
Dfd_FlyReg_FBgn0000439
|
0.612
|
0.789
|
Dfd
M06228_2.00 |
Drosophila melanogaster |
NBTAATKR |
YMATTAVN |
B1H
Zhu et al.(2011)
Dfd_SOLEXA_FBgn0000439
|
0.612
|
0.789
|
Dfd
M09675_2.00 |
Drosophila melanogaster |
TTAATKRB |
VYMATTAA |
Misc
Kulakovskiy et al.(2009)
Dfd
|
0.612
|
0.789
|
Dfd
M10784_2.00 |
Drosophila melanogaster |
NNNNRKTAATNNNNNN |
NNNNNNATTAMYNNNN |
Transfac
Matys et al.(2006)
I$DFD_01
|
0.612
|
0.789
|
Mnx1
M00388_2.00 |
Mus musculus |
NTAATBDNNN |
NNNHVATTAN |
PBM
Berger et al.(2008)
Hlxb9_3422
|
0.608
|
0.579
|
MNX1
M03143_2.00 |
Homo sapiens |
NHTAATTRNH |
DNYAATTADN |
SELEX
Jolma et al.(2013)
MNX1_1
|
0.608
|
0.579
|
exex
M03871_2.00 |
Drosophila melanogaster |
NNNNYAATTNNYDN |
NHRNNAATTRNNNN |
SELEX
Nitta et al.(2015)
exex_1
|
0.608
|
0.579
|
MNX1
M05126_2.00 |
Homo sapiens |
NTAATTRN |
NYAATTAN |
SELEX
Yin et al.(2017)
MNX1_eDBD_HT-SELEX
|
0.608
|
0.579
|
exex
M06544_2.00 |
Drosophila melanogaster |
BTAATTA |
TAATTAV |
B1H
Mathelier et al.(2014)
MA0224.1
|
0.608
|
0.579
|
exex
M06364_2.00 |
Drosophila melanogaster |
TAATTAV |
BTAATTA |
B1H
Zhu et al.(2011)
Exex_Cell_FBgn0041156
|
0.608
|
0.579
|
exex
M06365_2.00 |
Drosophila melanogaster |
TAATBR |
YVATTA |
B1H
Zhu et al.(2011)
Exex_SOLEXA_FBgn0041156
|
0.608
|
0.579
|
MNX1
M05127_2.00 |
Homo sapiens |
HTAAYGHB |
VDCRTTAD |
SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_1
|
0.608
|
0.579
|
MNX1
M05128_2.00 |
Homo sapiens |
NTAATTRN |
NYAATTAN |
SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_2
|
0.608
|
0.579
|
Hoxa10
M00382_2.00 |
Mus musculus |
NHWAYNNNN |
NNNNRTWDN |
PBM
Berger et al.(2008)
Hoxa10_2318
|
0.607
|
0.667
|
Hoxc10
M00421_2.00 |
Mus musculus |
TTWATKAB |
VTMATWAA |
PBM
Berger et al.(2008)
Hoxc10_2779
|
0.607
|
0.667
|
Hoxd10
M00509_2.00 |
Mus musculus |
NNNNNNNN |
NNNNNNNN |
PBM
Berger et al.(2008)
Hoxd10_2368
|
0.607
|
0.667
|
HOXC10
M03228_2.00 |
Homo sapiens |
DTTTWATKDB |
VHMATWAAAH |
SELEX
Jolma et al.(2013)
HOXC10_1
|
0.607
|
0.667
|
HOXC10
M03229_2.00 |
Homo sapiens |
NNTTWATKRB |
VYMATWAANN |
SELEX
Jolma et al.(2013)
HOXC10_2
|
0.607
|
0.667
|
HOXC10
M03230_2.00 |
Homo sapiens |
NWTTWAYGAB |
VTCRTWAAWN |
SELEX
Jolma et al.(2013)
HOXC10_3
|
0.607
|
0.667
|
Hoxc10
M03252_2.00 |
Mus musculus |
DTTTWAYGAY |
RTCRTWAAAH |
SELEX
Jolma et al.(2013)
Hoxc10_1
|
0.607
|
0.667
|
Hoxc10
M03253_2.00 |
Mus musculus |
DTTTWATKRY |
RYMATWAAAH |
SELEX
Jolma et al.(2013)
Hoxc10_2
|
0.607
|
0.667
|
HOXA10
M05394_2.00 |
Homo sapiens |
RRTCGTAAAAH |
DTTTTACGAYY |
SELEX
Yin et al.(2017)
HOXA10_eDBD_HT-SELEX_1
|
0.607
|
0.667
|
HOXA10
M05395_2.00 |
Homo sapiens |
NTTTTATKRCY |
RGYMATAAAAN |
SELEX
Yin et al.(2017)
HOXA10_eDBD_HT-SELEX_2
|
0.607
|
0.667
|
HOXA10
M05398_2.00 |
Homo sapiens |
NRTCRTWAANN |
NNTTWAYGAYN |
SELEX
Yin et al.(2017)
HOXA10_FL_HT-SELEX_1
|
0.607
|
0.667
|
HOXA10
M05399_2.00 |
Homo sapiens |
NNTTWATKRCN |
NGYMATWAANN |
SELEX
Yin et al.(2017)
HOXA10_FL_HT-SELEX_2
|
0.607
|
0.667
|
HOXC10
M05335_2.00 |
Homo sapiens |
NDTTTATKRCN |
NGYMATAAAHN |
SELEX
Yin et al.(2017)
HOXC10_eDBD_HT-SELEX_1
|
0.607
|
0.667
|
HOXC10
M05336_2.00 |
Homo sapiens |
NRTCGTAAAHN |
NDTTTACGAYN |
SELEX
Yin et al.(2017)
HOXC10_eDBD_HT-SELEX_2
|
0.607
|
0.667
|
HOXC10
M05339_2.00 |
Homo sapiens |
NTTTTATKRCN |
NGYMATAAAAN |
SELEX
Yin et al.(2017)
HOXC10_FL_HT-SELEX_1
|
0.607
|
0.667
|
HOXC10
M05340_2.00 |
Homo sapiens |
NRTCGTAAAWN |
NWTTTACGAYN |
SELEX
Yin et al.(2017)
HOXC10_FL_HT-SELEX_2
|
0.607
|
0.667
|
HOXD10
M05112_2.00 |
Homo sapiens |
NKTTTATKRC |
GYMATAAAMN |
SELEX
Yin et al.(2017)
HOXD10_eDBD_HT-SELEX_1
|
0.607
|
0.667
|
HOXD10
M05113_2.00 |
Homo sapiens |
RTCGTAAAHN |
NDTTTACGAY |
SELEX
Yin et al.(2017)
HOXD10_eDBD_HT-SELEX_2
|
0.607
|
0.667
|
HOXD10
M05116_2.00 |
Homo sapiens |
RGTCGTAAAAH |
DTTTTACGACY |
SELEX
Yin et al.(2017)
HOXD10_FL_HT-SELEX_1
|
0.607
|
0.667
|
HOXD10
M05117_2.00 |
Homo sapiens |
RRYMATAAAAH |
DTTTTATKRYY |
SELEX
Yin et al.(2017)
HOXD10_FL_HT-SELEX_2
|
0.607
|
0.667
|
Hoxa10
M09170_2.00 |
Mus musculus |
DCATAAAYYRBH |
DVYRRTTTATGH |
Misc
Kulakovskiy et al.(2013)
HXA10_MOUSE.H11MO.0.C
|
0.607
|
0.667
|
Hoxa10
M10763_2.00 |
Mus musculus |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXA10_Q5
|
0.607
|
0.667
|
HOXD10
M10687_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXD10_Q2
|
0.607
|
0.667
|
HOXD10
M10688_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXD10_Q6
|
0.607
|
0.667
|
HOXA10
M05396_2.00 |
Homo sapiens |
NGTCGTAAAWN |
NWTTTACGACN |
SELEX
Yin et al.(2017)
HOXA10_eDBD_Methyl-HT-SELEX_1
|
0.607
|
0.667
|
HOXA10
M05397_2.00 |
Homo sapiens |
NTTTTATKRCB |
VGYMATAAAAN |
SELEX
Yin et al.(2017)
HOXA10_eDBD_Methyl-HT-SELEX_2
|
0.607
|
0.667
|
HOXA10
M05400_2.00 |
Homo sapiens |
NRTCGTWAANN |
NNTTWACGAYN |
SELEX
Yin et al.(2017)
HOXA10_FL_Methyl-HT-SELEX_1
|
0.607
|
0.667
|
HOXA10
M05401_2.00 |
Homo sapiens |
NNTTWATKRYN |
NRYMATWAANN |
SELEX
Yin et al.(2017)
HOXA10_FL_Methyl-HT-SELEX_2
|
0.607
|
0.667
|
HOXC10
M05337_2.00 |
Homo sapiens |
NTTTTATKRCN |
NGYMATAAAAN |
SELEX
Yin et al.(2017)
HOXC10_eDBD_Methyl-HT-SELEX_1
|
0.607
|
0.667
|
HOXC10
M05338_2.00 |
Homo sapiens |
NRTCGTAAAHN |
NDTTTACGAYN |
SELEX
Yin et al.(2017)
HOXC10_eDBD_Methyl-HT-SELEX_2
|
0.607
|
0.667
|
HOXC10
M05341_2.00 |
Homo sapiens |
DTTTTATKRCH |
DGYMATAAAAH |
SELEX
Yin et al.(2017)
HOXC10_FL_Methyl-HT-SELEX_1
|
0.607
|
0.667
|
HOXC10
M05342_2.00 |
Homo sapiens |
VGTCGTAAAHN |
NDTTTACGACB |
SELEX
Yin et al.(2017)
HOXC10_FL_Methyl-HT-SELEX_2
|
0.607
|
0.667
|
HOXD10
M05114_2.00 |
Homo sapiens |
NTTTTATKRC |
GYMATAAAAN |
SELEX
Yin et al.(2017)
HOXD10_eDBD_Methyl-HT-SELEX_1
|
0.607
|
0.667
|
HOXD10
M05115_2.00 |
Homo sapiens |
GTCGTAAAHN |
NDTTTACGAC |
SELEX
Yin et al.(2017)
HOXD10_eDBD_Methyl-HT-SELEX_2
|
0.607
|
0.667
|
HOXD10
M05118_2.00 |
Homo sapiens |
VGTCGTAAAAH |
DTTTTACGACB |
SELEX
Yin et al.(2017)
HOXD10_FL_Methyl-HT-SELEX_1
|
0.607
|
0.667
|
HOXD10
M05119_2.00 |
Homo sapiens |
DGYAATAAAAH |
DTTTTATTRCH |
SELEX
Yin et al.(2017)
HOXD10_FL_Methyl-HT-SELEX_2
|
0.607
|
0.667
|
SPU_026099
M02175_2.00 |
Strongylocentrotus purpuratus |
KTAATTRB |
VYAATTAM |
PBM
Weirauch et al.(2014)
pTH6140
|
0.607
|
0.719
|
Pdx1
M00446_2.00 |
Mus musculus |
NWRAYNNN |
NNNRTYWN |
PBM
Berger et al.(2008)
Ipf1_3815
|
0.606
|
0.684
|
PDX1
M03155_2.00 |
Homo sapiens |
NTAATTRNNNYTAATTRN |
NYAATTARNNNYAATTAN |
SELEX
Jolma et al.(2013)
PDX1_1
|
0.606
|
0.684
|
PDX1
M03156_2.00 |
Homo sapiens |
BTAATKRN |
NYMATTAV |
SELEX
Jolma et al.(2013)
PDX1_2
|
0.606
|
0.684
|
PDX1
M05161_2.00 |
Homo sapiens |
YTAATKRB |
VYMATTAR |
SELEX
Yin et al.(2017)
PDX1_eDBD_HT-SELEX
|
0.606
|
0.684
|
PDX1
M09147_2.00 |
Homo sapiens |
TGATWGATK |
MATCWATCA |
Misc
Kulakovskiy et al.(2013)
PDX1_HUMAN.H11MO.0.A
|
0.606
|
0.684
|
Pdx1
M09192_2.00 |
Mus musculus |
VYTAATGRB |
VYCATTARB |
Misc
Kulakovskiy et al.(2013)
PDX1_MOUSE.H11MO.0.B
|
0.606
|
0.684
|
Pdx1
M09571_2.00 |
Mus musculus |
TGATTRATKR |
YMATYAATCA |
Misc
Heinz et al.(2010)
Islet-Pdx1_SRA008281
|
0.606
|
0.684
|
PDX1
M10699_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IPF1_01
|
0.606
|
0.684
|
PDX1
M10700_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IPF1_02
|
0.606
|
0.684
|
PDX1
M10701_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IPF1_03
|
0.606
|
0.684
|
PDX1
M10702_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IPF1_04
|
0.606
|
0.684
|
PDX1
M10703_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IPF1_05
|
0.606
|
0.684
|
PDX1
M10704_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IPF1_Q4_01
|
0.606
|
0.684
|
PDX1
M10705_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IPF1_Q4
|
0.606
|
0.684
|
PDX1
M10706_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IPF1_Q5_01
|
0.606
|
0.684
|
PDX1
M10707_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IPF1_Q5
|
0.606
|
0.684
|
PDX1
M10708_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IPF1_Q6
|
0.606
|
0.684
|
PDX1
M05162_2.00 |
Homo sapiens |
HTAAYGAB |
VTCRTTAD |
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_1
|
0.606
|
0.684
|
PDX1
M05163_2.00 |
Homo sapiens |
YTAATKRB |
VYMATTAR |
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_2
|
0.606
|
0.684
|
Q9GP48_9TURB
M02217_2.00 |
Discocelis tigrina |
DTAATTAB |
VTAATTAH |
PBM
Weirauch et al.(2014)
pTH6515
|
0.606
|
0.579
|
For this family, TFs with SR scores > 0.599 will likely have a similar motif |