POU5F1B (Homo sapiens)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSG00000212993 T209944_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
POU5F1B
M01509_2.00		 Homo sapiens
HHWBYRN
NYRVWDD		 PBM
Yin et al.(2017b)
POU5F1_5mCG		 (Direct) (Direct)
POU5F1B
M01510_2.00		 Homo sapiens
NHWWBND
HNVWWDN		 PBM
Yin et al.(2017b)
POU5F1_Cytosine		 (Direct) (Direct)
POU5F1B
M03239_2.00		 Homo sapiens
TATGYWAAT
ATTWRCATA		 SELEX
Jolma et al.(2013)
POU5F1P1_1		 (Direct) (Direct)
POU5F1B
M03240_2.00		 Homo sapiens
WTGMATATKCAW
WTGMATATKCAW		 SELEX
Jolma et al.(2013)
POU5F1P1_2		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01509_2.00 POU 19 90
M01509_2.00 Homeodomain 109 164
M01510_2.00 POU 19 90
M01510_2.00 Homeodomain 109 164

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000419298 Homeodomain 231 286

Links

Other Homeodomain family TFs
Other Homo sapiens TFs

0 Related TFs

">No related TF found