DBX1 (Gasterosteus aculeatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSGACG00000014112 T210127_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Dbx1
M00451_2.00 		Mus musculus
WTTAATTA
TAATTAAW		 PBM
Berger et al.(2008)
Dbx1_3486 		0.862 0.946
Dbx2
M00499_2.00 		Mus musculus
NNDTNNN
NNNAHNN		 PBM
Berger et al.(2008)
Dbx2_3487 		0.826 0.821
Dbx
M02128_2.00 		Drosophila melanogaster
WTTAATTA
TAATTAAW		 PBM
Weirauch et al.(2014)
pTH6051 		0.818 0.857
Dbx
M06550_2.00 		Drosophila melanogaster
TTWATKA
TMATWAA		 B1H
Mathelier et al.(2014)
MA0174.1 		0.818 0.857
Hlx
M00485_2.00 		Mus musculus
NNNAWND
HNWTNNN		 PBM
Berger et al.(2008)
Hlx1_2350 		0.733 0.696
H2.0
M06489_2.00 		Drosophila melanogaster
WTWATDA
THATWAW		 B1H
Mathelier et al.(2014)
MA0448.1 		0.732 0.714
H2.0
M06250_2.00 		Drosophila melanogaster
TWWWWDA
THAWWWA		 B1H
Zhu et al.(2011)
H2.0_Cell_FBgn0001170 		0.732 0.714
H2.0
M06251_2.00 		Drosophila melanogaster
WTWATTRN
NYAATWAW		 B1H
Zhu et al.(2011)
H2.0_SOLEXA_FBgn0001170 		0.732 0.714
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000018634 Homeodomain 181 236

Links

Other Homeodomain family TFs
Other Gasterosteus aculeatus TFs

270 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGLB013811 Biomphalaria glabrata BGLB013811 I 0.867
DBX1 Otolemur garnettii ENSOGAG00000014591 I 0.862
DBX1 Oryctolagus cuniculus ENSOCUG00000007615 I 0.862
Dbx1 Mus musculus ENSMUSG00000030507 D 0.862
ENSONIG00000007144 Oreochromis niloticus ENSONIG00000007144 I 0.862
ENSOARG00000008379 Ovis aries ENSOARG00000008379 I 0.862
DBX1 Oryzias latipes ENSORLG00000014512 I 0.862
ENSPMAG00000004878 Petromyzon marinus ENSPMAG00000004878 I 0.862
ENSPFOG00000014727 Poecilia formosa ENSPFOG00000014727 I 0.862
ENSPFOG00000004028 Poecilia formosa ENSPFOG00000004028 I 0.862
ENSMPUG00000013914 Mustela putorius furo ENSMPUG00000013914 I 0.862
dbx1b Oryzias latipes ENSORLG00000000807 I 0.862
ENSMGAG00000002299 Meleagris gallopavo ENSMGAG00000002299 I 0.862
ENSGACG00000000220 Gasterosteus aculeatus ENSGACG00000000220 I 0.862
DBX1 Homo sapiens ENSG00000109851 I 0.862
DBX1 Felis catus ENSFCAG00000028654 I 0.862
ENSFALG00000001676 Ficedula albicollis ENSFALG00000001676 I 0.862
DBX1 Gallus gallus ENSGALG00000003965 I 0.862
ENSGMOG00000003244 Gadus morhua ENSGMOG00000003244 I 0.862
Dbx1 Rattus norvegicus ENSRNOG00000014706 I 0.862
ENSLOCG00000004886 Lepisosteus oculatus ENSLOCG00000004886 I 0.862
DBX1 Loxodonta africana ENSLAFG00000007378 I 0.862
ENSLACG00000011299 Latimeria chalumnae ENSLACG00000011299 I 0.862
DBX1 Monodelphis domestica ENSMODG00000009081 I 0.862
ENSSHAG00000011774 Sarcophilus harrisii ENSSHAG00000011774 I 0.862
Pvit_06412 Pogona vitticeps Pvit_06412 I 0.862
ENSBTAP00000003543-D1 Bos grunniens ENSBTAP00000003543-D1 I 0.862
Cmyd_10016425 Chelonia mydas Cmyd_10016425 I 0.862
Brh_R002799 Buceros rhinoceros Brh_R002799 I 0.862
Tal_R010631 Tyto alba Tal_R010631 I 0.862
fgenesh2_pg.scaffold_222000058 Branchiostoma floridae fgenesh2_pg.scaffold_222000058 I 0.862
dbx1.S Xenopus laevis XB-GENE-865351 I 0.862
dbx1 Xenopus tropicalis XB-GENE-480177 I 0.862
Sakowv30044972m.g Saccoglossus kowalevskii Sakowv30044972m.g I 0.862
Ocbimv22005553m.g Octopus bimaculoides Ocbimv22005553m.g I 0.862
Alligator_sinensis_CCG013033.1 Alligator sinensis Alligator_sinensis_CCG013033.1 I 0.862
Afo_R010414 Aptenodytes forsteri Afo_R010414 I 0.862
dbx1b Tetraodon nigroviridis ENSTNIG00000009613 I 0.862
DBX1 Taeniopygia guttata ENSTGUG00000015791 I 0.862
ENSSTOG00000015557 Ictidomys tridecemlineatus ENSSTOG00000015557 I 0.862
DBX1 Sus scrofa ENSSSCG00000013350 I 0.862
dbx1b Takifugu rubripes ENSTRUG00000015886 I 0.862
ENSXMAG00000006476 Xiphophorus maculatus ENSXMAG00000006476 I 0.862
Aan_R006646 Calypte anna Aan_R006646 I 0.862
LotgiG64310 Lottia gigantea LotgiG64310 I 0.862
ENSXMAG00000010186 Xiphophorus maculatus ENSXMAG00000010186 I 0.862
DBX1 Equus caballus ENSECAG00000019994 I 0.862
ENSPSIG00000012138 Pelodiscus sinensis ENSPSIG00000012138 I 0.862
ENSAMXG00000016737 Astyanax mexicanus ENSAMXG00000016737 I 0.862
DBX1 Callithrix jacchus ENSCJAG00000006734 I 0.862
dbx1a Danio rerio ENSDARG00000086393 I 0.862
ENSCSAG00000005115 Chlorocebus sabaeus ENSCSAG00000005115 I 0.862
ENSAMXG00000012905 Astyanax mexicanus ENSAMXG00000012905 I 0.862
dbx1b Danio rerio ENSDARG00000001859 I 0.862
DBX1 Anolis carolinensis ENSACAG00000015625 I 0.862
ENSAPLG00000013752 Anas platyrhynchos ENSAPLG00000013752 I 0.862
ENSCING00000012835 Ciona intestinalis ENSCING00000012835 I 0.862
CapteG220261 Capitella teleta CapteG220261 I 0.862
DBX1 Dasypus novemcinctus ENSDNOG00000015450 I 0.862
DBX1 Bos taurus ENSBTAG00000002733 I 0.862
CGI_10002480 Crassostrea gigas CGI_10002480 I 0.862
DBX1 Tetraodon nigroviridis ENSTNIG00000004855 I 0.861
ENSONIG00000012709 Oreochromis niloticus ENSONIG00000012709 I 0.860
DBX1 Cavia porcellus ENSCPOG00000019811 I 0.858
TriadG18102 Trichoplax adhaerens TriadG18102 I 0.856
nRc.2.0.1.g17174 Romanomermis culicivorax nRc.2.0.1.g17174 I 0.845
dbx2.L Xenopus laevis XB-GENE-6486281 I 0.836
YQE_05944 Dendroctonus ponderosae YQE_05944 I 0.830
PHUM365830 Pediculus humanus PHUM365830 I 0.830
TC015146 Tribolium castaneum TC015146 I 0.830
KGM_12383 Danaus plexippus KGM_12383 I 0.830
ENSLOCG00000016431 Lepisosteus oculatus ENSLOCG00000016431 I 0.829
ENSMEUG00000016510 Macropus eugenii ENSMEUG00000016510 I 0.828
ENSSHAG00000012659 Sarcophilus harrisii ENSSHAG00000012659 I 0.828
ENSPFOG00000008292 Poecilia formosa ENSPFOG00000008292 I 0.828
NV18099 Nasonia vitripennis NV18099 I 0.828
DBX2 Monodelphis domestica ENSMODG00000018530 I 0.828
ENSXMAG00000004689 Xiphophorus maculatus ENSXMAG00000004689 I 0.828
ISCW020093 Ixodes scapularis ISCW020093 I 0.828
ENSONIG00000008764 Oreochromis niloticus ENSONIG00000008764 I 0.828
ENSTRUG00000016696 Takifugu rubripes ENSTRUG00000016696 I 0.828
ENSAMXG00000014548 Astyanax mexicanus ENSAMXG00000014548 I 0.828
GB49362 Apis mellifera GB49362 I 0.828
ENSGACG00000004000 Gasterosteus aculeatus ENSGACG00000004000 I 0.828
ACYPI27939 Acyrthosiphon pisum ACYPI27939 I 0.828
ENSTNIG00000015979 Tetraodon nigroviridis ENSTNIG00000015979 I 0.828
ENSGMOG00000009056 Gadus morhua ENSGMOG00000009056 I 0.828
ENSORLG00000002970 Oryzias latipes ENSORLG00000002970 I 0.828
Brh_R003637 Buceros rhinoceros Brh_R003637 I 0.826
DBX2 Procavia capensis ENSPCAG00000006299 I 0.826
ENSP00000331470 Macaca fascicularis ENSP00000331470 I 0.826
ENSCAFG00000009372 Canis familiaris ENSCAFG00000009372 I 0.826
Gfo_R004056 Geospiza fortis Gfo_R004056 I 0.826
ENSP00000331470-D1 Bos grunniens ENSP00000331470-D1 I 0.826
DBX2 Bos taurus ENSBTAG00000006635 I 0.826
ENSAPLG00000011161 Anas platyrhynchos ENSAPLG00000011161 I 0.826
ENSTSYG00000001451 Tarsius syrichta ENSTSYG00000001451 I 0.826
DBX2 Tursiops truncatus ENSTTRG00000003582 I 0.826
ENSSTOG00000000232 Ictidomys tridecemlineatus ENSSTOG00000000232 I 0.826
DBX2 Tupaia belangeri ENSTBEG00000012639 I 0.826
ENSAMEG00000015811 Ailuropoda melanoleuca ENSAMEG00000015811 I 0.826
DBX2 Taeniopygia guttata ENSTGUG00000006020 I 0.826
ENSVPAG00000000460 Vicugna pacos ENSVPAG00000000460 I 0.826
ENSSARG00000007797 Sorex araneus ENSSARG00000007797 I 0.826
DBX2 Pan troglodytes ENSPTRG00000004849 I 0.826
Afo_R000355 Aptenodytes forsteri Afo_R000355 I 0.826
Aan_R012348 Calypte anna Aan_R012348 I 0.826
ENSACAG00000002581 Anolis carolinensis ENSACAG00000002581 I 0.826
DBX2 Dasypus novemcinctus ENSDNOG00000046429 I 0.826
Dbx2 Rattus norvegicus ENSRNOG00000006885 I 0.826
ENSPPYG00000004431 Pongo abelii ENSPPYG00000004431 I 0.826
ENSPANG00000005953 Papio anubis ENSPANG00000005953 I 0.826
ENSCPOG00000011069 Cavia porcellus ENSCPOG00000011069 I 0.826
ENSMMUG00000022290 Macaca mulatta ENSMMUG00000022290 I 0.826
ENSMPUG00000000372 Mustela putorius furo ENSMPUG00000000372 I 0.826
DBX2 Callithrix jacchus ENSCJAG00000013213 I 0.826
Dbx2 Mus musculus ENSMUSG00000045608 D 0.826
ENSMLUG00000007038 Myotis lucifugus ENSMLUG00000007038 I 0.826
ENSMICG00000007764 Microcebus murinus ENSMICG00000007764 I 0.826
DBX2 Homo sapiens ENSG00000185610 I 0.826
ENSFALG00000010170 Ficedula albicollis ENSFALG00000010170 I 0.826
DBX2 Gallus gallus ENSGALG00000009604 I 0.826
DBX2 Gorilla gorilla ENSGGOG00000004664 I 0.826
DBX2 Loxodonta africana ENSLAFG00000005006 I 0.826
DBX2 Equus caballus ENSECAG00000012695 I 0.826
ENSMGAG00000009614 Meleagris gallopavo ENSMGAG00000009614 I 0.826
ENSOARG00000019598 Ovis aries ENSOARG00000019598 I 0.826
ENSOCUG00000022068 Oryctolagus cuniculus ENSOCUG00000022068 I 0.826
DBX2 Otolemur garnettii ENSOGAG00000008999 I 0.826
Tal_R005491 Tyto alba Tal_R005491 I 0.826
Myotis_brandtii_DBX2_10029487 Myotis brandtii Myotis_brandtii_DBX2_10029487 I 0.826
ENSNLEG00000017924 Nomascus leucogenys ENSNLEG00000017924 I 0.826
ENSPSIG00000009557 Pelodiscus sinensis ENSPSIG00000009557 I 0.825
Pvit_11516 Pogona vitticeps Pvit_11516 I 0.824
dbx2 Xenopus tropicalis XB-GENE-481734 I 0.824
DAPPUDRAFT_37379 Daphnia pulex DAPPUDRAFT_37379 I 0.824
ENSLACG00000003968 Latimeria chalumnae ENSLACG00000003968 I 0.823
CABZ01093502.1 Danio rerio ENSDARG00000105053 I 0.822
GG14836 Drosophila erecta FBgn0107091 I 0.818
ACOM031223 Anopheles coluzzii ACOM031223 I 0.818
GM14459 Drosophila sechellia FBgn0169382 I 0.818
AATE018929 Anopheles atroparvus AATE018929 I 0.818
GL25317 Drosophila persimilis FBgn0162901 I 0.818
Dbx Drosophila melanogaster FBgn0261723 D 0.818
GK12528 Drosophila willistoni FBgn0214538 I 0.818
GE21201 Drosophila yakuba FBgn0238476 I 0.818
AMEM006151 Anopheles merus AMEM006151 I 0.818
GA11582 Drosophila pseudoobscura FBgn0071633 I 0.818
AAEL005974 Aedes aegypti AAEL005974 I 0.818
GH16166 Drosophila grimshawi FBgn0123637 I 0.818
GJ12089 Drosophila virilis FBgn0199341 I 0.818
GI13319 Drosophila mojavensis FBgn0136076 I 0.818
MDOA015219 Musca domestica MDOA015219 I 0.818
LLOJ006552 Lutzomyia longipalpis LLOJ006552 I 0.818
AGAP005727 Anopheles gambiae AGAP005727 I 0.818
GF20095 Drosophila ananassae FBgn0097102 I 0.818
tetur05g09190 Tetranychus urticae tetur05g09190 I 0.816
ENSEEUG00000006518 Erinaceus europaeus ENSEEUG00000006518 I 0.810
gw.473.22.1 Branchiostoma floridae gw.473.22.1 I 0.787
NEMVEDRAFT_v1g100892 Nematostella vectensis NEMVEDRAFT_v1g100892 I 0.766
NEMVEDRAFT_v1g80365 Nematostella vectensis NEMVEDRAFT_v1g80365 I 0.766
LotgiG80492 Lottia gigantea LotgiG80492 I 0.765
HelroG148518 Helobdella robusta HelroG148518 I 0.765
DAPPUDRAFT_53297 Daphnia pulex DAPPUDRAFT_53297 I 0.764
gw.83.80.1 Branchiostoma floridae gw.83.80.1 I 0.755
hlx Ciona intestinalis ENSCING00000019191 I 0.750
ASIS013776 Anopheles sinensis ASIS013776 I 0.734
PHUM604510 Pediculus humanus PHUM604510 I 0.734
TC008368 Tribolium castaneum TC008368 I 0.734
HHAL002166-PA Halyomorpha halys HHAL002166-PA I 0.734
CLEC011407 Cimex lectularius CLEC011407 I 0.734
ENSPMAG00000009840 Petromyzon marinus ENSPMAG00000009840 I 0.734
BGIBMGA008482 Bombyx mori BGIBMGA008482 I 0.734
KGM_21891 Danaus plexippus KGM_21891 I 0.734
SMAR002236 Strigamia maritima SMAR002236 I 0.734
L798_13412 Zootermopsis nevadensis L798_13412 I 0.734
AFUN003184 Anopheles funestus AFUN003184 I 0.734
ADIR004110 Anopheles dirus ADIR004110 I 0.734
RPRC010617 Rhodnius prolixus RPRC010617 I 0.734
hlx Xenopus tropicalis XB-GENE-483226 I 0.733
Pvit_13000 Pogona vitticeps Pvit_13000 I 0.733
CGI_10013972 Crassostrea gigas CGI_10013972 I 0.733
ENSBTAP00000019352-D1 Bos grunniens ENSBTAP00000019352-D1 I 0.733
GB42897 Apis mellifera GB42897 I 0.733
Ogr19305 Ophisaurus gracilis Ogr19305 I 0.733
CapteG173964 Capitella teleta CapteG173964 I 0.733
Cflo_10458--XP_001121170.1_APIME Camponotus floridanus Cflo_10458--XP_001121170.1_APIME I 0.733
SPU_014802 Strongylocentrotus purpuratus SPU_014802 I 0.733
ACEP14997 Atta cephalotes ACEP14997 I 0.733
Hsal_11910--XP_001121170.1_APIME Harpegnathos saltator Hsal_11910--XP_001121170.1_APIME I 0.733
Sakowv30040055m.g Saccoglossus kowalevskii Sakowv30040055m.g I 0.733
SINV11867 Solenopsis invicta SINV11867 I 0.733
hlx1 Tetraodon nigroviridis ENSTNIG00000016400 I 0.733
HLX Callithrix jacchus ENSCJAG00000006110 I 0.733
ENSOARG00000013206 Ovis aries ENSOARG00000013206 I 0.733
ENSNLEG00000013773 Nomascus leucogenys ENSNLEG00000013773 I 0.733
Hlx Mus musculus ENSMUSG00000039377 D 0.733
HLX Monodelphis domestica ENSMODG00000004664 I 0.733
ENSMPUG00000003954 Mustela putorius furo ENSMPUG00000003954 I 0.733
HLX Oryctolagus cuniculus ENSOCUG00000006015 I 0.733
HLX Otolemur garnettii ENSOGAG00000012065 I 0.733
HLX Procavia capensis ENSPCAG00000012295 I 0.733
ENSPFOG00000018919 Poecilia formosa ENSPFOG00000018919 I 0.733
ENSPANG00000010481 Papio anubis ENSPANG00000010481 I 0.733
HLX Bos taurus ENSBTAG00000014560 I 0.733
ENSONIG00000005980 Oreochromis niloticus ENSONIG00000005980 I 0.733
HLX Canis familiaris ENSCAFG00000011340 I 0.733
HLX Myotis lucifugus ENSMLUG00000015571 I 0.733
ENSMICG00000005919 Microcebus murinus ENSMICG00000005919 I 0.733
HLX Homo sapiens ENSG00000136630 I 0.733
hlx1 Gasterosteus aculeatus ENSGACG00000010057 I 0.733
HLX Dasypus novemcinctus ENSDNOG00000007014 I 0.733
HLX Erinaceus europaeus ENSEEUG00000004973 I 0.733
Hlx Dipodomys ordii ENSDORG00000001941 I 0.733
HLX Equus caballus ENSECAG00000003025 I 0.733
hlx1 Danio rerio ENSDARG00000009134 I 0.733
HLX Gorilla gorilla ENSGGOG00000002735 I 0.733
HLX Cavia porcellus ENSCPOG00000024028 I 0.733
ENSLOCG00000016392 Lepisosteus oculatus ENSLOCG00000016392 I 0.733
HLX Loxodonta africana ENSLAFG00000001289 I 0.733
ENSCSAG00000015879 Chlorocebus sabaeus ENSCSAG00000015879 I 0.733
ENSGMOG00000001751 Gadus morhua ENSGMOG00000001751 I 0.733
ENSLACG00000008955 Latimeria chalumnae ENSLACG00000008955 I 0.733
ENSPPYG00000000202 Pongo abelii ENSPPYG00000000202 I 0.733
hlx1 Oryzias latipes ENSORLG00000012055 I 0.733
hlx1 Takifugu rubripes ENSTRUG00000006753 I 0.733
ENSSTOG00000006326 Ictidomys tridecemlineatus ENSSTOG00000006326 I 0.733
Hlx Rattus norvegicus ENSRNOG00000002309 I 0.733
ENSSHAG00000012054 Sarcophilus harrisii ENSSHAG00000012054 I 0.733
ENSSSCG00000010830 Sus scrofa ENSSSCG00000010830 I 0.733
ENSAMEG00000010272 Ailuropoda melanoleuca ENSAMEG00000010272 I 0.733
HLX Pteropus vampyrus ENSPVAG00000004552 I 0.733
ENSPSIG00000013519 Pelodiscus sinensis ENSPSIG00000013519 I 0.733
HLX Tupaia belangeri ENSTBEG00000014384 I 0.733
ENSAMXG00000013419 Astyanax mexicanus ENSAMXG00000013419 I 0.733
HLX Pan troglodytes ENSPTRG00000002004 I 0.733
ENSXMAG00000017389 Xiphophorus maculatus ENSXMAG00000017389 I 0.733
GK15402 Drosophila willistoni FBgn0217407 I 0.732
GF14286 Drosophila ananassae FBgn0091313 I 0.732
LCUP007749 Lucilia cuprina LCUP007749 I 0.732
H2.0 Drosophila melanogaster FBgn0001170 D 0.732
GG10151 Drosophila erecta FBgn0102462 I 0.732
GL19089 Drosophila persimilis FBgn0156689 I 0.732
GE18959 Drosophila yakuba FBgn0236329 I 0.732
GJ12503 Drosophila virilis FBgn0199743 I 0.732
MDOA007091 Musca domestica MDOA007091 I 0.732
GD22610 Drosophila simulans FBgn0194011 I 0.732
GM17974 Drosophila sechellia FBgn0172881 I 0.732
GI11292 Drosophila mojavensis FBgn0134053 I 0.732
GA11095 Drosophila pseudoobscura FBgn0071150 I 0.732
GH10711 Drosophila grimshawi FBgn0118192 I 0.732
ACYPI48371 Acyrthosiphon pisum ACYPI48371 I 0.720
ENSOANG00000001435 Ornithorhynchus anatinus ENSOANG00000001435 I 0.717
HLX Ochotona princeps ENSOPRG00000011504 I 0.717
HelroG74087 Helobdella robusta HelroG74087 I 0.710
SMU15032021 Schmidtea mediterranea SMU15032021 I 0.705
SMU15029512 Schmidtea mediterranea SMU15029512 I 0.704
HLX Felis catus ENSFCAG00000002974 I 0.686
AAEL012150 Aedes aegypti AAEL012150 I 0.680
EFV57815 Trichinella spiralis EFV57815 I 0.662
D917_00900 Trichinella nativa D917_00900 I 0.662
ENSAMXG00000009415 Astyanax mexicanus ENSAMXG00000009415 I 0.654
LDEC019190 Leptinotarsa decemlineata LDEC019190 I 0.639
tetur22g00030 Tetranychus urticae tetur22g00030 I 0.617
ENSPMAG00000000895 Petromyzon marinus ENSPMAG00000000895 I 0.614
ENSPFOG00000009708 Poecilia formosa ENSPFOG00000009708 I 0.609
nanog Danio rerio ENSDARG00000075113 I 0.609
ENSACAG00000015317 Anolis carolinensis ENSACAG00000015317 I 0.608
Aan_R009530 Calypte anna Aan_R009530 I 0.599
RPRC002486 Rhodnius prolixus RPRC002486 I 0.418