ALX1 (Gorilla gorilla)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSGGOG00000000168 T210343_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Alx1
M00471_2.00 		Mus musculus
NTAATTRN
NYAATTAN		 PBM
Berger et al.(2008)
Cart1_0997 		0.606 0.979
Alx1
M00472_2.00 		Mus musculus
NTAATDDN
NHHATTAN		 PBM
Berger et al.(2008)
Cart1_1275 		0.606 0.979
ALX1
M03226_2.00 		Homo sapiens
NTAATTRVRTTAN
NTAAYBYAATTAN		 SELEX
Jolma et al.(2013)
CART1_1 		0.606 0.979
Alx1
M03272_2.00 		Mus musculus
NNTAATTRRD
HYYAATTANN		 SELEX
Jolma et al.(2013)
Alx1_1 		0.606 0.979
Alx1
M03273_2.00 		Mus musculus
NTAATYNRATTAN
NTAATYNRATTAN		 SELEX
Jolma et al.(2013)
Alx1_2 		0.606 0.979
ALX1
M05327_2.00 		Homo sapiens
TAATYTAATTA
TAATTARATTA		 SELEX
Yin et al.(2017)
ALX1_FL_HT-SELEX 		0.606 0.979
ALX1
M09160_2.00 		Homo sapiens
VTAATYRVATTA
TAATBYRATTAB		 Misc
Kulakovskiy et al.(2013)
ALX1_HUMAN.H11MO.0.B 		0.606 0.979
Alx1
M09201_2.00 		Mus musculus
VTAATYRVATTA
TAATBYRATTAB		 Misc
Kulakovskiy et al.(2013)
ALX1_MOUSE.H11MO.0.B 		0.606 0.979
ALX1
M10741_2.00 		Homo sapiens
VVHTAATKNNHATTABYN
NRVTAATDNNMATTADBB		 Transfac
Matys et al.(2006)
V$CART1_01 		0.606 0.979
ALX1
M05328_2.00 		Homo sapiens
TAATYTAATTA
TAATTARATTA		 SELEX
Yin et al.(2017)
ALX1_FL_Methyl-HT-SELEX 		0.606 0.979
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000000166 Homeodomain 133 180
ENSGGOP00000025437 Homeodomain 133 189

Links

Other Homeodomain family TFs
Other Gorilla gorilla TFs

199 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGLB003458 Biomphalaria glabrata BGLB003458 I 0.789
AMEC003288 Anopheles melas AMEC003288 N 0.744
maker-nMf.1.1.scaf00145-augustus-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf00145-augustus-gene-0.13 I 0.737
ACHR010176 Anopheles christyi ACHR010176 N 0.737
Cmyd_10002827 Chelonia mydas Cmyd_10002827 N 0.733
ENSMPUG00000006459 Mustela putorius furo ENSMPUG00000006459 I 0.732
LCUP002254 Lucilia cuprina LCUP002254 N 0.728
NEMVEDRAFT_v1g49015 Nematostella vectensis NEMVEDRAFT_v1g49015 I 0.721
NEMVEDRAFT_v1g48953 Nematostella vectensis NEMVEDRAFT_v1g48953 I 0.721
NEMVEDRAFT_v1g93991 Nematostella vectensis NEMVEDRAFT_v1g93991 I 0.707
ENSMGAG00000015339 Meleagris gallopavo ENSMGAG00000015339 I 0.705
ENSGMOG00000015411 Gadus morhua ENSGMOG00000015411 I 0.705
OTP Pteropus vampyrus ENSPVAG00000011630 I 0.705
NKX1-1 Pan troglodytes ENSPTRG00000041220 I 0.702
CLEC000966 Cimex lectularius CLEC000966 N 0.701
DILT_0000923301 Diphyllobothrium latum DILT_0000923301 I 0.699
nRc.2.0.1.g34717 Romanomermis culicivorax nRc.2.0.1.g34717 I 0.691
PXEA_0001895501 Protopolystoma xenopodis PXEA_0001895501 I 0.689
C_01031 Schistosoma haematobium C_01031 I 0.687
Smp_189380 Schistosoma mansoni Smp_189380 I 0.687
C_01032 Schistosoma haematobium C_01032 I 0.687
SMTD_0002280601 Schistosoma mattheei SMTD_0002280601 I 0.687
SROB_0001108301 Schistosoma rodhaini SROB_0001108301 I 0.687
PEQ_0000006101 Parascaris equorum PEQ_0000006101 N 0.685
ISCW024267 Ixodes scapularis ISCW024267 I 0.682
WUBG_03794 Wuchereria bancrofti WUBG_03794 N 0.676
ENSGMOG00000011340 Gadus morhua ENSGMOG00000011340 N 0.675
ACOM034313 Anopheles coluzzii ACOM034313 I 0.674
ANCDUO_14705 Ancylostoma duodenale ANCDUO_14705 I 0.674
e_gw.549.21.1 Branchiostoma floridae e_gw.549.21.1 I 0.674
ANCCEY_05038 Ancylostoma ceylanicum ANCCEY_05038 I 0.674
AARA006634 Anopheles arabiensis AARA006634 I 0.668
AQUA001638 Anopheles quadriannulatus AQUA001638 I 0.668
ACOM028612 Anopheles coluzzii ACOM028612 I 0.668
AGAP003574 Anopheles gambiae AGAP003574 I 0.668
nLs.2.1.2.g00296 Litomosoides sigmodontis nLs.2.1.2.g00296 I 0.665
MCINX000309 Melitaea cinxia MCINX000309 I 0.665
NECAME_15973 Necator americanus NECAME_15973 I 0.663
SCUD_0001719701 Schistosoma curassoni SCUD_0001719701 I 0.663
Smp_165410 Schistosoma mansoni Smp_165410 I 0.663
TCLT_0000599001 Thelazia callipaeda TCLT_0000599001 I 0.662
GPUH_0002067401 Gongylonema pulchrum GPUH_0002067401 I 0.662
OFLC_0000069201 Onchocerca flexuosa OFLC_0000069201 I 0.662
WBGene00245266 Onchocerca volvulus WBGene00245266 I 0.662
PDX1 Dasypus novemcinctus ENSDNOG00000003213 I 0.660
EVEC_0000662001 Enterobius vermicularis EVEC_0000662001 I 0.660
ASIM_0001502101 Anisakis simplex ASIM_0001502101 I 0.657
tetur14g02380 Tetranychus urticae tetur14g02380 I 0.657
Hba_17613 Heterorhabditis bacteriophora Hba_17613 I 0.657
ALUE_0001238401 Ascaris lumbricoides ALUE_0001238401 I 0.657
WUBG_01783 Wuchereria bancrofti WUBG_01783 I 0.657
TCLT_0000305201 Thelazia callipaeda TCLT_0000305201 I 0.654
NBR_0000568501 Nippostrongylus brasiliensis NBR_0000568501 I 0.654
LOAG_17577 Loa loa LOAG_17577 N 0.654
PEQ_0000367601 Parascaris equorum PEQ_0000367601 I 0.654
ENSGACG00000020715 Gasterosteus aculeatus ENSGACG00000020715 I 0.653
ENSGMOG00000006424 Gadus morhua ENSGMOG00000006424 I 0.653
ASIM_0001653501 Anisakis simplex ASIM_0001653501 I 0.652
TCNE_0001765901 Toxocara canis TCNE_0001765901 I 0.652
ASIM_0000400001 Anisakis simplex ASIM_0000400001 I 0.652
DME_0001008101 Dracunculus medinensis DME_0001008101 I 0.652
EEL_0000392901 Elaeophora elaphi EEL_0000392901 I 0.652
nOo.2.0.1.g00955 Onchocerca ochengi nOo.2.0.1.g00955 I 0.652
WUBG_02861 Wuchereria bancrofti WUBG_02861 I 0.652
PEQ_0001172001 Parascaris equorum PEQ_0001172001 I 0.650
nAv.1.0.1.g03166 Acanthocheilonema viteae nAv.1.0.1.g03166 I 0.650
ENSPFOG00000017586 Poecilia formosa ENSPFOG00000017586 I 0.650
ACAC_0000394201 Angiostrongylus cantonensis ACAC_0000394201 I 0.650
ENSPANG00000025837 Papio anubis ENSPANG00000025837 I 0.650
BTMF_0000584401 Brugia timori BTMF_0000584401 I 0.650
L893_g26530 Steinernema glaseri L893_g26530 I 0.650
CGOC_0000550601 Cylicostephanus goldi CGOC_0000550601 I 0.650
TELCIR_07155 Teladorsagia circumcincta TELCIR_07155 I 0.650
DME_0000365001 Dracunculus medinensis DME_0000365001 I 0.647
augustus_masked-nMf.1.1.scaf12078-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf12078-processed-gene-0.0 I 0.646
OFLC_0001568801 Onchocerca flexuosa OFLC_0001568801 I 0.646
PXEA_0002510601 Protopolystoma xenopodis PXEA_0002510601 I 0.646
TRE_0000860801 Trichobilharzia regenti TRE_0000860801 I 0.646
SCUD_0000812901 Schistosoma curassoni SCUD_0000812901 I 0.646
ENSTSYG00000012674 Tarsius syrichta ENSTSYG00000012674 I 0.645
PEQ_0000070601 Parascaris equorum PEQ_0000070601 N 0.645
ANCDUO_02875 Ancylostoma duodenale ANCDUO_02875 I 0.644
WBGene00242173 Onchocerca volvulus WBGene00242173 I 0.644
GPUH_0000001901 Gongylonema pulchrum GPUH_0000001901 I 0.644
LOAG_02387 Loa loa LOAG_02387 I 0.644
nOo.2.0.1.g01207 Onchocerca ochengi nOo.2.0.1.g01207 I 0.644
SMUV_0000715401 Syphacia muris SMUV_0000715401 N 0.642
MEOX1 Bos taurus ENSBTAG00000015751 I 0.640
ENSPFOG00000024523 Poecilia formosa ENSPFOG00000024523 I 0.635
TsM_000296500 Taenia solium TsM_000296500 I 0.634
PXEA_0001255201 Protopolystoma xenopodis PXEA_0001255201 I 0.634
Aan_R000875 Calypte anna Aan_R000875 I 0.634
CapteG30874 Capitella teleta CapteG30874 I 0.634
TASK_0000431401 Taenia asiatica TASK_0000431401 I 0.634
ASIS004766 Anopheles sinensis ASIS004766 I 0.634
LLOJ004353 Lutzomyia longipalpis LLOJ004353 I 0.634
Smp_125600 Schistosoma mansoni Smp_125600 I 0.634
ACUA028387 Anopheles culicifacies ACUA028387 I 0.634
CGI_10009942 Crassostrea gigas CGI_10009942 I 0.634
Alligator_sinensis_CCG007467.1 Alligator sinensis Alligator_sinensis_CCG007467.1 I 0.634
DAPPUDRAFT_55144 Daphnia pulex DAPPUDRAFT_55144 I 0.634
Sakowv30043910m.g Saccoglossus kowalevskii Sakowv30043910m.g I 0.634
CLEC007879 Cimex lectularius CLEC007879 I 0.634
Afo_R001648 Aptenodytes forsteri Afo_R001648 I 0.634
SINV18014 Solenopsis invicta SINV18014 I 0.634
BARHL1 Felis catus ENSFCAG00000007105 I 0.634
LotgiG120200 Lottia gigantea LotgiG120200 I 0.634
BARHL2 Monodelphis domestica ENSMODG00000012056 I 0.634
ENSMGAG00000006701 Meleagris gallopavo ENSMGAG00000006701 I 0.634
MESCA003890 Megaselia scalaris MESCA003890 I 0.634
MESCA011262 Megaselia scalaris MESCA011262 I 0.634
ENSORLG00000012370 Oryzias latipes ENSORLG00000012370 I 0.634
BARHL2 Vicugna pacos ENSVPAG00000005913 I 0.634
ENSOARG00000018096 Ovis aries ENSOARG00000018096 I 0.633
ENSGGOG00000027271 Gorilla gorilla ENSGGOG00000027271 I 0.633
ASIS018158 Anopheles sinensis ASIS018158 N 0.626
ALUE_0001765001 Ascaris lumbricoides ALUE_0001765001 I 0.624
alx4b Danio rerio ENSDARG00000074442 I 0.618
MNX1 Homo sapiens ENSG00000130675 D 0.618
HOXC4 Procavia capensis ENSPCAG00000011039 I 0.614
TriadG9178 Trichoplax adhaerens TriadG9178 N 0.612
ARX Loxodonta africana ENSLAFG00000001779 I 0.612
YQE_04150 Dendroctonus ponderosae YQE_04150 I 0.607
ALX1 Monodelphis domestica ENSMODG00000020494 I 0.606
ALX1 Anolis carolinensis ENSACAG00000011108 I 0.606
ALX1 Bos taurus ENSBTAG00000014977 I 0.606
ALX1 Myotis lucifugus ENSMLUG00000008586 I 0.606
ALX1 Canis familiaris ENSCAFG00000005972 I 0.606
ENSMICG00000012977 Microcebus murinus ENSMICG00000012977 I 0.606
ALX1 Cavia porcellus ENSCPOG00000027131 I 0.606
ENSMPUG00000007727 Mustela putorius furo ENSMPUG00000007727 I 0.606
ALX1 Ornithorhynchus anatinus ENSOANG00000006647 I 0.606
ENSOARG00000015379 Ovis aries ENSOARG00000015379 I 0.606
ENSAMXG00000003941 Astyanax mexicanus ENSAMXG00000003941 I 0.606
ENSNLEG00000005381 Nomascus leucogenys ENSNLEG00000005381 I 0.606
Alx1 Mus musculus ENSMUSG00000036602 D 0.606
alx1 Danio rerio ENSDARG00000062824 I 0.606
ENSAPLG00000001231 Anas platyrhynchos ENSAPLG00000001231 I 0.606
ENSLOCG00000016343 Lepisosteus oculatus ENSLOCG00000016343 I 0.606
ALX1 Loxodonta africana ENSLAFG00000013544 I 0.606
ENSFALG00000010547 Ficedula albicollis ENSFALG00000010547 I 0.606
ALX1 Callithrix jacchus ENSCJAG00000019458 I 0.606
ALX1 Felis catus ENSFCAG00000024706 I 0.606
ALX1 Echinops telfairi ENSETEG00000010288 I 0.606
ALX1 Erinaceus europaeus ENSEEUG00000000089 I 0.606
Alx1 Dipodomys ordii ENSDORG00000011021 I 0.606
ALX1 Equus caballus ENSECAG00000008597 I 0.606
ALX1 Oryctolagus cuniculus ENSOCUG00000009125 I 0.606
ALX1 Homo sapiens ENSG00000180318 D 0.606
ENSLACG00000006482 Latimeria chalumnae ENSLACG00000006482 I 0.606
ENSCSAG00000003845 Chlorocebus sabaeus ENSCSAG00000003845 I 0.606
ENSGMOG00000007917 Gadus morhua ENSGMOG00000007917 I 0.606
ALX1 Choloepus hoffmanni ENSCHOG00000008308 I 0.606
alx1 Gasterosteus aculeatus ENSGACG00000009557 I 0.606
ALX1 Gallus gallus ENSGALG00000027213 I 0.606
ALX1 Dasypus novemcinctus ENSDNOG00000019645 I 0.606
alx1 Oryzias latipes ENSORLG00000002662 I 0.606
Pvit_07518 Pogona vitticeps Pvit_07518 I 0.606
Ogr09207 Ophisaurus gracilis Ogr09207 I 0.606
Myotis_brandtii_ALX1_10011031 Myotis brandtii Myotis_brandtii_ALX1_10011031 I 0.606
Tal_R010080 Tyto alba Tal_R010080 I 0.606
ALX1 Tursiops truncatus ENSTTRG00000014650 I 0.606
ALX1 Taeniopygia guttata ENSTGUG00000007899 I 0.606
alx1 Takifugu rubripes ENSTRUG00000012686 I 0.606
ENSTSYG00000013252 Tarsius syrichta ENSTSYG00000013252 I 0.606
Gfo_R005135 Geospiza fortis Gfo_R005135 I 0.606
ENSP00000315417 Macaca fascicularis ENSP00000315417 I 0.606
Afo_R009660 Aptenodytes forsteri Afo_R009660 I 0.606
ENSXMAG00000002854 Xiphophorus maculatus ENSXMAG00000002854 I 0.606
Aan_R010911 Calypte anna Aan_R010911 I 0.606
Alligator_sinensis_CCG000480.1 Alligator sinensis Alligator_sinensis_CCG000480.1 I 0.606
Brh_R010921 Buceros rhinoceros Brh_R010921 I 0.606
ENSBTAP00000019938-D1 Bos grunniens ENSBTAP00000019938-D1 I 0.606
Cmyd_10009139 Chelonia mydas Cmyd_10009139 I 0.606
ALX1 Vicugna pacos ENSVPAG00000003559 I 0.606
Sjc_0076920 Schistosoma japonicum Sjc_0076920 I 0.606
ALX1 Tupaia belangeri ENSTBEG00000005133 I 0.606
ALX1 Procavia capensis ENSPCAG00000011229 I 0.606
ENSPFOG00000012120 Poecilia formosa ENSPFOG00000012120 I 0.606
ENSPPYG00000004809 Pongo abelii ENSPPYG00000004809 I 0.606
ENSPANG00000005930 Papio anubis ENSPANG00000005930 I 0.606
ENSAMEG00000009049 Ailuropoda melanoleuca ENSAMEG00000009049 I 0.606
ALX1 Otolemur garnettii ENSOGAG00000014211 I 0.606
ENSONIG00000003839 Oreochromis niloticus ENSONIG00000003839 I 0.606
ALX1 Ochotona princeps ENSOPRG00000007282 I 0.606
ENSPSIG00000007876 Pelodiscus sinensis ENSPSIG00000007876 I 0.606
ENSPSIG00000005438 Pelodiscus sinensis ENSPSIG00000005438 I 0.606
ENSSTOG00000026970 Ictidomys tridecemlineatus ENSSTOG00000026970 I 0.606
alx1.L Xenopus laevis XB-GENE-866461 I 0.606
alx1 Xenopus tropicalis XB-GENE-853095 I 0.606
ALX1 Sorex araneus ENSSARG00000000186 I 0.606
ENSSSCG00000000933 Sus scrofa ENSSSCG00000000933 I 0.606
ALX1 Pan troglodytes ENSPTRG00000005272 I 0.606
Alx1 Rattus norvegicus ENSRNOG00000004390 I 0.606
DAPPUDRAFT_62565 Daphnia pulex DAPPUDRAFT_62565 I 0.603
ENSMGAG00000011132 Meleagris gallopavo ENSMGAG00000011132 I 0.603
SCLCIDRAFT_964190 Scleroderma citrinum SCLCIDRAFT_964190 N 0.602
ISX Otolemur garnettii ENSOGAG00000004339 I 0.601
ENSAMXG00000014772 Astyanax mexicanus ENSAMXG00000014772 I 0.600