RHOXF1 (Gorilla gorilla)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSGGOG00000016112 T210482_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RHOXF1
M03089_2.00
Homo sapiens
RGATNAKCY

RGMTNATCY
SELEX
Jolma et al.(2013)
RHOXF1_1
0.834 0.965
RHOXF1
M03090_2.00
Homo sapiens
NTRAKCCN

NGGMTYAN
SELEX
Jolma et al.(2013)
RHOXF1_2
0.834 0.965
RHOXF1
M03091_2.00
Homo sapiens
VGMTHAKCC

GGMTDAKCB
SELEX
Jolma et al.(2013)
RHOXF1_3
0.834 0.965
RHOXF1
M03092_2.00
Homo sapiens
NTRAKCCH

DGGMTYAN
SELEX
Jolma et al.(2013)
RHOXF1_4
0.834 0.965
RHOXF1
M04947_2.00
Homo sapiens
NTRATCCN

NGGATYAN
SELEX
Yin et al.(2017)
RHOXF1_FL_HT-SELEX
0.834 0.965
RHOXF1
M04948_2.00
Homo sapiens
NTRATCCN

NGGATYAN
SELEX
Yin et al.(2017)
RHOXF1_FL_Methyl-HT-SELEX
0.834 0.965
dharma
M02080_2.00
Danio rerio
NNRAKCY

RGMTYNN
PBM
Weirauch et al.(2014)
pTH6530
0.670 0.561
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000015714 Homeodomain 104 160

Links

Other Homeodomain family TFs
Other Gorilla gorilla TFs

Invalid Input OrderBy

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action