ENSGMOG00000005518 (Gadus morhua)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSGMOG00000005518 T210586_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Nkx3-1
M00170_2.00
Mus musculus
NDAAGTRBNN

NNVYACTTHN
PBM
Badis et al.(2009)
Nkx3-1_2923
0.850 0.877
Nkx3-1
M00420_2.00
Mus musculus
NNAAGTRBNN

NNVYACTTNN
PBM
Berger et al.(2008)
Nkx3-1_2923
0.850 0.877
NKX3-1
M05255_2.00
Homo sapiens
NNTAAGTGSN

NSCACTTANN
SELEX
Yin et al.(2017)
NKX3-1_eDBD_HT-SELEX
0.850 0.877
NKX3-1
M09154_2.00
Homo sapiens
NYDAAGTGBYWD

HWRVCACTTHRN
Misc
Kulakovskiy et al.(2013)
NKX31_HUMAN.H11MO.0.C
0.850 0.877
Nkx3-1
M09184_2.00
Mus musculus
NYDAAGTGBYWD

HWRVCACTTHRN
Misc
Kulakovskiy et al.(2013)
NKX31_MOUSE.H11MO.0.C
0.850 0.877
NKX3-1
M09559_2.00
Homo sapiens
BTRAGTRBYY

RRVYACTYAV
Misc
Heinz et al.(2010)
LNCaP-Nkx3.1_GSE28264
0.850 0.877
NKX3-1
M10729_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GT1_Q6_01
0.850 0.877
NKX3-1
M10730_2.00
Homo sapiens
NWWTAAGTATWH

DWATACTTAWWN
Transfac
Matys et al.(2006)
V$NKX3A_01
0.850 0.877
NKX3-1
M10731_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX3A_Q3
0.850 0.877
NKX3-1
M05256_2.00
Homo sapiens
NNTAAGTGBN

NVCACTTANN
SELEX
Yin et al.(2017)
NKX3-1_eDBD_Methyl-HT-SELEX_1
0.850 0.877
NKX3-1
M05257_2.00
Homo sapiens
NTAAYSWB

VWSRTTAN
SELEX
Yin et al.(2017)
NKX3-1_eDBD_Methyl-HT-SELEX_2
0.850 0.877
Nkx3-2
M00506_2.00
Mus musculus
NNRAGDRNN

NNYHCTYNN
PBM
Berger et al.(2008)
Bapx1_2343
0.837 0.825
NKX3-2
M05012_2.00
Homo sapiens
NNTAAGTGSN

NSCACTTANN
SELEX
Yin et al.(2017)
NKX3-2_eDBD_HT-SELEX
0.837 0.825
NKX3-2
M09138_2.00
Homo sapiens
TTAAGTGBNH

DNVCACTTAA
Misc
Kulakovskiy et al.(2013)
NKX32_HUMAN.H11MO.0.C
0.837 0.825
Nkx3-2
M09212_2.00
Mus musculus
TTAAGTGBNH

DNVCACTTAA
Misc
Kulakovskiy et al.(2013)
NKX32_MOUSE.H11MO.0.B
0.837 0.825
NKX3-2
M10663_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX32_01
0.837 0.825
NKX3-2
M05013_2.00
Homo sapiens
NNTAAGTGBN

NVCACTTANN
SELEX
Yin et al.(2017)
NKX3-2_eDBD_Methyl-HT-SELEX_1
0.837 0.825
NKX3-2
M05014_2.00
Homo sapiens
NTAACGHB

VDCGTTAN
SELEX
Yin et al.(2017)
NKX3-2_eDBD_Methyl-HT-SELEX_2
0.837 0.825
bap
M00560_2.00
Drosophila melanogaster
NDAAGTRBNN

NNVYACTTHN
PBM
Busser et al.(2012a)
Bap
0.829 0.772
bap
M02119_2.00
Drosophila melanogaster
NYTAAGTRSNN

NNSYACTTARN
PBM
Weirauch et al.(2014)
pTH5945
0.829 0.772
bap
M03812_2.00
Drosophila melanogaster
NNTAAGTGBN

NVCACTTANN
SELEX
Nitta et al.(2015)
bap_1
0.829 0.772
bap
M06504_2.00
Drosophila melanogaster
TTAAGTR

YACTTAA
B1H
Mathelier et al.(2014)
MA0211.1
0.829 0.772
bap
M06287_2.00
Drosophila melanogaster
NBTTAAGTRN

NYACTTAAVN
B1H
Zhu et al.(2011)
Bap_Cell_FBgn0004862
0.829 0.772
bap
M06288_2.00
Drosophila melanogaster
NYTAAKTR

YAMTTARN
B1H
Zhu et al.(2011)
Bap_SOLEXA_FBgn0004862
0.829 0.772
ENSCING00000007395
M02076_2.00
Ciona intestinalis
NNNDWNWR

YWNWHNNN
PBM
Weirauch et al.(2014)
pTH5922
0.820 0.649
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGMOP00000005858 Homeodomain 70 126

Links

Other Homeodomain family TFs
Other Gadus morhua TFs

225 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nkx3-1 Gasterosteus aculeatus ENSGACG00000010776 I 0.855
nkx3-1 Oryzias latipes ENSORLG00000010925 I 0.855
ENSONIG00000011762 Oreochromis niloticus ENSONIG00000011762 I 0.855
ENSPFOG00000009654 Poecilia formosa ENSPFOG00000009654 I 0.854
ENSXMAG00000020262 Xiphophorus maculatus ENSXMAG00000020262 I 0.854
ENSLOCG00000015015 Lepisosteus oculatus ENSLOCG00000015015 I 0.854
ENSCPOG00000010557 Cavia porcellus ENSCPOG00000010557 I 0.852
ENSAPLG00000014690 Anas platyrhynchos ENSAPLG00000014690 I 0.852
ENSSHAG00000015475 Sarcophilus harrisii ENSSHAG00000015475 I 0.850
ENSCSAG00000016229 Chlorocebus sabaeus ENSCSAG00000016229 I 0.850
NKX3-1 Microcebus murinus ENSMICG00000011189 I 0.850
NKX3-1 Callithrix jacchus ENSCJAG00000020092 I 0.850
ENSTBEG00000002319 Tupaia belangeri ENSTBEG00000002319 I 0.850
ENSSSCG00000028216 Sus scrofa ENSSSCG00000028216 I 0.850
ENSPCAG00000016644 Procavia capensis ENSPCAG00000016644 I 0.850
NKX3-1 Dasypus novemcinctus ENSDNOG00000044451 I 0.850
NKX3-1 Pteropus vampyrus ENSPVAG00000005378 I 0.850
NKX3-1 Homo sapiens ENSG00000167034 D 0.850
ENSPPYG00000018442 Pongo abelii ENSPPYG00000018442 I 0.850
NKX3-1 Pan troglodytes ENSPTRG00000020081 I 0.850
ENSFALG00000011121 Ficedula albicollis ENSFALG00000011121 I 0.850
NKX3-1 Echinops telfairi ENSETEG00000018790 I 0.850
NKX3-1 Myotis lucifugus ENSMLUG00000006118 I 0.850
NKX3-1 Loxodonta africana ENSLAFG00000008941 I 0.850
NKX3-1 Erinaceus europaeus ENSEEUG00000001113 I 0.850
Nkx3-1 Rattus norvegicus ENSRNOG00000015477 I 0.850
ENSSARG00000001895 Sorex araneus ENSSARG00000001895 I 0.850
ENSCHOG00000011132 Choloepus hoffmanni ENSCHOG00000011132 I 0.850
Nkx3-1 Mus musculus ENSMUSG00000022061 D 0.850
Myotis_brandtii_NKX3_10014306 Myotis brandtii Myotis_brandtii_NKX3_10014306 I 0.850
ENSP00000370253 Macaca fascicularis ENSP00000370253 I 0.850
ENSACAG00000026683 Anolis carolinensis ENSACAG00000026683 I 0.850
ENSNLEG00000015968 Nomascus leucogenys ENSNLEG00000015968 I 0.850
NKX3-1 Ornithorhynchus anatinus ENSOANG00000008027 I 0.850
NKX3-1 Otolemur garnettii ENSOGAG00000001303 I 0.850
NKX3-1 Ochotona princeps ENSOPRG00000003179 I 0.850
NKX3-1 Oryctolagus cuniculus ENSOCUG00000004294 I 0.850
ENSOARG00000010071 Ovis aries ENSOARG00000010071 I 0.850
ENSTSYG00000007109 Tarsius syrichta ENSTSYG00000007109 I 0.850
ENSAMEG00000002866 Ailuropoda melanoleuca ENSAMEG00000002866 I 0.850
ENSCAFG00000009107 Canis familiaris ENSCAFG00000009107 I 0.850
NKX3-1 Vicugna pacos ENSVPAG00000004503 I 0.850
NKX3-1 Macaca mulatta ENSMMUG00000009796 I 0.850
NKX3-1 Gorilla gorilla ENSGGOG00000014369 I 0.850
ENSBTAP00000001615-D1 Bos grunniens ENSBTAP00000001615-D1 I 0.850
NKX3-1 Monodelphis domestica ENSMODG00000016789 I 0.850
ENSMPUG00000003418 Mustela putorius furo ENSMPUG00000003418 I 0.850
NKX3-1 Bos taurus ENSBTAG00000001221 I 0.850
ENSPANG00000004934 Papio anubis ENSPANG00000004934 I 0.850
ENSAMXG00000024837 Astyanax mexicanus ENSAMXG00000024837 I 0.849
ENSPSIG00000017342 Pelodiscus sinensis ENSPSIG00000017342 I 0.846
ENSECAG00000001509 Equus caballus ENSECAG00000001509 I 0.846
CapteG79432 Capitella teleta CapteG79432 I 0.846
nkx3-1.L Xenopus laevis XB-GENE-479031 I 0.846
nkx3-1.S Xenopus laevis XB-GENE-6252708 I 0.846
XP_002932598 Xenopus tropicalis XP_002932598 I 0.846
nkx3-1 Danio rerio ENSDARG00000078280 I 0.843
NEMVEDRAFT_v1g208034 Nematostella vectensis NEMVEDRAFT_v1g208034 I 0.841
SMAR005030 Strigamia maritima SMAR005030 I 0.837
nkx3.2 Oryzias latipes ENSORLG00000000593 I 0.837
Alligator_sinensis_CCG000534.1 Alligator sinensis Alligator_sinensis_CCG000534.1 I 0.837
Sakowv30040088m.g Saccoglossus kowalevskii Sakowv30040088m.g I 0.837
nkx3-2.S Xenopus laevis XB-GENE-876836 I 0.837
nkx3-2 Xenopus tropicalis XB-GENE-876834 I 0.837
ENSOPRG00000005452 Ochotona princeps ENSOPRG00000005452 I 0.837
Pvit_15821 Pogona vitticeps Pvit_15821 I 0.837
ENSPANG00000021310 Papio anubis ENSPANG00000021310 I 0.837
ENSPPYG00000014611 Pongo abelii ENSPPYG00000014611 I 0.837
ENSONIG00000002379 Oreochromis niloticus ENSONIG00000002379 I 0.837
Nkx3-2 Rattus norvegicus ENSRNOG00000060782 I 0.837
NKX3-2 Pteropus vampyrus ENSPVAG00000002830 I 0.837
ENSPSIG00000012169 Pelodiscus sinensis ENSPSIG00000012169 I 0.837
ENSPFOG00000002882 Poecilia formosa ENSPFOG00000002882 I 0.837
ENSSSCG00000024594 Sus scrofa ENSSSCG00000024594 I 0.837
ENSTTRG00000003623 Tursiops truncatus ENSTTRG00000003623 I 0.837
ENSPTRG00000031253 Pan troglodytes ENSPTRG00000031253 I 0.837
NKX3-2 Procavia capensis ENSPCAG00000013077 I 0.837
nkx3.2 Takifugu rubripes ENSTRUG00000014438 I 0.837
nkx3.2 Tetraodon nigroviridis ENSTNIG00000015732 I 0.837
ENSXMAG00000016282 Xiphophorus maculatus ENSXMAG00000016282 I 0.837
ENSSTOG00000021803 Ictidomys tridecemlineatus ENSSTOG00000021803 I 0.837
nkx3.2 Gasterosteus aculeatus ENSGACG00000016378 I 0.837
NKX3-2 Homo sapiens ENSG00000109705 D 0.837
NKX3-2 Gorilla gorilla ENSGGOG00000008589 I 0.837
ENSGMOG00000018725 Gadus morhua ENSGMOG00000018725 I 0.837
ENSLACG00000012763 Latimeria chalumnae ENSLACG00000012763 I 0.837
ENSLACG00000003608 Latimeria chalumnae ENSLACG00000003608 I 0.837
ENSAMXG00000003840 Astyanax mexicanus ENSAMXG00000003840 I 0.837
ENSEEUG00000012691 Erinaceus europaeus ENSEEUG00000012691 I 0.837
NKX3-2 Cavia porcellus ENSCPOG00000005449 I 0.837
NKX3-2 Canis familiaris ENSCAFG00000015412 I 0.837
NKX3-2 Bos taurus ENSBTAG00000010896 I 0.837
ENSCSAG00000016338 Chlorocebus sabaeus ENSCSAG00000016338 I 0.837
NKX3-2 Dasypus novemcinctus ENSDNOG00000043074 I 0.837
nkx3.2 Danio rerio ENSDARG00000037639 I 0.837
NKX3-2 Callithrix jacchus ENSCJAG00000012159 I 0.837
NKX3-2 Loxodonta africana ENSLAFG00000031404 I 0.837
ENSMPUG00000000476 Mustela putorius furo ENSMPUG00000000476 I 0.837
ENSAMEG00000009342 Ailuropoda melanoleuca ENSAMEG00000009342 I 0.837
Nkx3-2 Mus musculus ENSMUSG00000049691 D 0.837
ENSNLEG00000016256 Nomascus leucogenys ENSNLEG00000016256 I 0.837
NKX3-2 Otolemur garnettii ENSOGAG00000015615 I 0.837
NKX3-2 Oryctolagus cuniculus ENSOCUG00000009039 I 0.837
ENSMMUG00000022026 Macaca mulatta ENSMMUG00000022026 I 0.837
NKX3-2 Monodelphis domestica ENSMODG00000024753 I 0.837
ENSMICG00000000190 Microcebus murinus ENSMICG00000000190 I 0.837
ENSLOCG00000009892 Lepisosteus oculatus ENSLOCG00000009892 I 0.837
NKX3-2 Myotis lucifugus ENSMLUG00000008362 I 0.837
CGI_10023919 Crassostrea gigas CGI_10023919 I 0.836
Hsal_06436--XP_001120208.1_APIME Harpegnathos saltator Hsal_06436--XP_001120208.1_APIME I 0.836
ACEP23863 Atta cephalotes ACEP23863 I 0.836
GB47401 Apis mellifera GB47401 I 0.836
NV25828 Nasonia vitripennis NV25828 I 0.836
estExt_fgenesh2_pg.C_1430013 Branchiostoma floridae estExt_fgenesh2_pg.C_1430013 I 0.836
SPU_013047 Strongylocentrotus purpuratus SPU_013047 I 0.836
SINV22315 Solenopsis invicta SINV22315 I 0.836
AFUN008966 Anopheles funestus AFUN008966 I 0.834
AAEL006597 Aedes aegypti AAEL006597 I 0.834
ADIR005347 Anopheles dirus ADIR005347 I 0.834
ACOM028774 Anopheles coluzzii ACOM028774 I 0.834
AFAF013479 Anopheles farauti AFAF013479 I 0.834
CPIJ004109 Culex quinquefasciatus CPIJ004109 I 0.834
ADAC003526 Anopheles darlingi ADAC003526 I 0.834
HelroG148616 Helobdella robusta HelroG148616 I 0.834
AMAM011860 Anopheles maculatus AMAM011860 I 0.834
AARA010121 Anopheles arabiensis AARA010121 I 0.834
ACHR006588 Anopheles christyi ACHR006588 I 0.834
AGAP003671 Anopheles gambiae AGAP003671 I 0.834
AEPI001627 Anopheles epiroticus AEPI001627 I 0.834
ASIS007650 Anopheles sinensis ASIS007650 I 0.834
AQUA001538 Anopheles quadriannulatus AQUA001538 I 0.834
ASTEI07437 Anopheles stephensi ASTEI07437 I 0.834
MDOA010758 Musca domestica MDOA010758 I 0.834
PPAI010327 Phlebotomus papatasi PPAI010327 I 0.834
AMIN004031 Anopheles minimus AMIN004031 I 0.834
AMEM005009 Anopheles merus AMEM005009 I 0.834
LCUP000733 Lucilia cuprina LCUP000733 I 0.834
AMEC017317 Anopheles melas AMEC017317 I 0.834
ACUA019412 Anopheles culicifacies ACUA019412 I 0.834
CpipJ_CPIJ004109 Culex pipiens CpipJ_CPIJ004109 I 0.834
AATE016309 Anopheles atroparvus AATE016309 I 0.834
nkx3.3 Gasterosteus aculeatus ENSGACG00000007573 I 0.832
nkx3-3.S Xenopus laevis XB-GENE-865322 I 0.832
Ocbimv22026957m.g Octopus bimaculoides Ocbimv22026957m.g I 0.832
ACYPI002893 Acyrthosiphon pisum ACYPI002893 I 0.832
nkx3-3 Xenopus tropicalis XB-GENE-479908 I 0.832
ENSORLG00000007716 Oryzias latipes ENSORLG00000007716 I 0.832
BGIBMGA010706 Bombyx mori BGIBMGA010706 I 0.832
ENSPFOG00000020885 Poecilia formosa ENSPFOG00000020885 I 0.832
ENSLOCG00000009031 Lepisosteus oculatus ENSLOCG00000009031 I 0.832
ENSAMXG00000002250 Astyanax mexicanus ENSAMXG00000002250 I 0.832
KGM_11246 Danaus plexippus KGM_11246 I 0.832
ENSXMAG00000020095 Xiphophorus maculatus ENSXMAG00000020095 I 0.832
nkx3.3 Danio rerio ENSDARG00000069327 I 0.832
MCINX004875 Melitaea cinxia MCINX004875 I 0.832
HMEL006181 Heliconius melpomene HMEL006181 I 0.832
MESCA006298 Megaselia scalaris MESCA006298 I 0.832
PHUM439840 Pediculus humanus PHUM439840 I 0.832
GF18600 Drosophila ananassae FBgn0095618 I 0.829
GG24598 Drosophila erecta FBgn0116730 I 0.829
GA20672 Drosophila pseudoobscura FBgn0080666 I 0.829
bap Drosophila simulans FBgn0067504 I 0.829
bap Drosophila melanogaster FBgn0004862 D 0.829
GH22032 Drosophila grimshawi FBgn0129493 I 0.829
bap Drosophila sechellia FBgn0067536 I 0.829
GJ14311 Drosophila virilis FBgn0201526 I 0.829
GE25732 Drosophila yakuba FBgn0242790 I 0.829
GI21951 Drosophila mojavensis FBgn0144680 I 0.829
GK14503 Drosophila willistoni FBgn0216509 I 0.829
GL27337 Drosophila persimilis FBgn0164918 I 0.829
ISCW014989 Ixodes scapularis ISCW014989 I 0.828
tetur04g08350 Tetranychus urticae tetur04g08350 I 0.828
RPRC001122 Rhodnius prolixus RPRC001122 I 0.824
CLEC002956 Cimex lectularius CLEC002956 I 0.823
LotgiG60615 Lottia gigantea LotgiG60615 I 0.823
ENSP00000371875 Macaca fascicularis ENSP00000371875 I 0.821
ENSCING00000007395 Ciona intestinalis ENSCING00000007395 D 0.820
TC012743 Tribolium castaneum TC012743 I 0.817
YQE_10102 Dendroctonus ponderosae YQE_10102 I 0.817
LDEC009723 Leptinotarsa decemlineata LDEC009723 I 0.817
SMTD_0000549701 Schistosoma mattheei SMTD_0000549701 I 0.814
SMRZ_0000016501 Schistosoma margrebowiei SMRZ_0000016501 I 0.814
Smp_140730 Schistosoma mansoni Smp_140730 I 0.814
A_02450 Schistosoma haematobium A_02450 I 0.814
csin109461 Clonorchis sinensis csin109461 I 0.813
PXEA_0003190801 Protopolystoma xenopodis PXEA_0003190801 I 0.811
SMU15003549 Schmidtea mediterranea SMU15003549 I 0.799
BGLB010692 Biomphalaria glabrata BGLB010692 I 0.793
TCLT_0000478201 Thelazia callipaeda TCLT_0000478201 I 0.748
Aan_R009530 Calypte anna Aan_R009530 I 0.735
ENSTTRG00000012332 Tursiops truncatus ENSTTRG00000012332 I 0.712
D915_02578 Fasciola hepatica D915_02578 I 0.701
ENSONIG00000018347 Oreochromis niloticus ENSONIG00000018347 I 0.693
HelroG138724 Helobdella robusta HelroG138724 I 0.683
MCOS_0000074801 Mesocestoides corti MCOS_0000074801 I 0.681
TTAC_0000184701 Hydatigera taeniaeformis TTAC_0000184701 I 0.645
TASK_0000475201 Taenia asiatica TASK_0000475201 I 0.645
TsM_000540100 Taenia solium TsM_000540100 I 0.645
EmuJ_000895600 Echinococcus multilocularis EmuJ_000895600 I 0.645
ECANG7_00763 Echinococcus canadensis ECANG7_00763 I 0.645
ENSAMXG00000009415 Astyanax mexicanus ENSAMXG00000009415 I 0.645
D918_06873 Trichuris suis D918_06873 I 0.637
TTRE_0000463801 Trichuris trichiura TTRE_0000463801 I 0.637
L893_g18140 Steinernema glaseri L893_g18140 I 0.635
nLs.2.1.2.g07743 Litomosoides sigmodontis nLs.2.1.2.g07743 I 0.628
BTMF_0000772101 Brugia timori BTMF_0000772101 I 0.628
ASIM_0001224701 Anisakis simplex ASIM_0001224701 I 0.619
Minc11316 Meloidogyne incognita Minc11316 I 0.616
WUBG_10043 Wuchereria bancrofti WUBG_10043 I 0.614
NKX2-6 Canis familiaris ENSCAFG00000024691 I 0.611
NKX2-6 Pteropus vampyrus ENSPVAG00000005380 I 0.611
ENSAMXG00000015414 Astyanax mexicanus ENSAMXG00000015414 I 0.611
NKX2-6 Equus caballus ENSECAG00000013714 I 0.611
NKX2-3 Takifugu rubripes ENSTRUG00000002729 I 0.610
ENSPFOG00000009440 Poecilia formosa ENSPFOG00000009440 I 0.610
ENSONIG00000000279 Oreochromis niloticus ENSONIG00000000279 I 0.610
NKX2-3 Takifugu rubripes ENSTRUG00000003800 I 0.610
ENSXMAG00000005680 Xiphophorus maculatus ENSXMAG00000005680 I 0.610
ENSTGUG00000004550 Taeniopygia guttata ENSTGUG00000004550 I 0.608
hlx Ciona intestinalis ENSCING00000019191 I 0.607
A_06201 Schistosoma haematobium A_06201 I 0.606
D917_04750 Trichinella nativa D917_04750 I 0.605
RSKR_0000979300 Rhabditophanes kr3021 RSKR_0000979300 I 0.603
HmN_000028800 Hymenolepis microstoma HmN_000028800 I 0.601
HNAJ_0001184001 Hymenolepis nana HNAJ_0001184001 I 0.601