ENSGMOG00000016065 (Gadus morhua)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSGMOG00000016065 T210707_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HNF1A
M03150_2.00
Homo sapiens
NGTTAATNATTAAYN

NRTTAATNATTAACN
SELEX
Jolma et al.(2013)
HNF1A_1
0.867 0.964
HNF1A
M09144_2.00
Homo sapiens
DGTTAATKATTAACH

DGTTAATMATTAACH
Misc
Kulakovskiy et al.(2013)
HNF1A_HUMAN.H11MO.0.C
0.867 0.964
HNF1A
M10690_2.00
Homo sapiens
RGTTAATDWTTRMHV

BDKYAAWHATTAACY
Transfac
Matys et al.(2006)
V$HNF1_01
0.867 0.964
HNF1A
M10691_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1A_Q4
0.867 0.964
HNF1A
M10692_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1A_Q5
0.867 0.964
HNF1A
M10693_2.00
Homo sapiens
DGBTAATBAWTHAMYWM

KWRKTDAWTVATTAVCH
Transfac
Matys et al.(2006)
V$HNF1_C
0.867 0.964
Hnf1b
M00408_2.00
Mus musculus
NNHWCNNN

NNNGWDNN
PBM
Berger et al.(2008)
Tcf2_0913
0.866 0.982
HNF1B
M03245_2.00
Homo sapiens
GTTAATNATTAAY

RTTAATNATTAAC
SELEX
Jolma et al.(2013)
HNF1B_1
0.866 0.982
HNF1B
M03246_2.00
Homo sapiens
NGTTAATNATTAAYN

NRTTAATNATTAACN
SELEX
Jolma et al.(2013)
HNF1B_2
0.866 0.982
HNF1B
M09168_2.00
Homo sapiens
DGTTAATRATTAACH

DGTTAATYATTAACH
Misc
Kulakovskiy et al.(2013)
HNF1B_HUMAN.H11MO.0.A
0.866 0.982
Hnf1b
M09179_2.00
Mus musculus
DGTTAATRATTAACH

DGTTAATYATTAACH
Misc
Kulakovskiy et al.(2013)
HNF1B_MOUSE.H11MO.0.A
0.866 0.982
HNF1B
M10758_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1B_Q6_01
0.866 0.982
HNF1B
M10759_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1B_Q6
0.866 0.982
HNF1B
M10760_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LFA1_Q6
0.866 0.982
Hnf1a
M00171_2.00
Mus musculus
HTAAYYNN

NNRRTTAD
PBM
Badis et al.(2009)
Tcf1_2666
0.860 0.945
Hnf1a
M00444_2.00
Mus musculus
HTAAYYNNN

NNNRRTTAD
PBM
Berger et al.(2008)
Tcf1_2666
0.860 0.945
Hnf1a
M09191_2.00
Mus musculus
RGTTAATNWTTDMHN

NDKHAAWNATTAACY
Misc
Kulakovskiy et al.(2013)
HNF1A_MOUSE.H11MO.0.A
0.860 0.945
Hmbox1
M00419_2.00
Mus musculus
NNNGWNNN

NNNWCNNN
PBM
Berger et al.(2008)
Hmbox1_2674
0.638 0.382
HMBOX1
M03167_2.00
Homo sapiens
BKTAACTARB

VYTAGTTAMV
SELEX
Jolma et al.(2013)
HMBOX1_1
0.638 0.382
HMBOX1
M05180_2.00
Homo sapiens
BTAACYAGB

VCTRGTTAV
SELEX
Yin et al.(2017)
HMBOX1_eDBD_HT-SELEX
0.638 0.382
HMBOX1
M05181_2.00
Homo sapiens
NTAACTAGB

VCTAGTTAN
SELEX
Yin et al.(2017)
HMBOX1_eDBD_Methyl-HT-SELEX
0.638 0.382
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGMOP00000017230 Homeodomain 242 317

Links

Other Homeodomain family TFs
Other Gadus morhua TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000006817 Ailuropoda melanoleuca ENSAMEG00000006817 I 0.000
Alligator_sinensis_CCG006627.1 Alligator sinensis Alligator_sinensis_CCG006627.1 I 0.000
ENSAPLG00000003356 Anas platyrhynchos ENSAPLG00000003356 I 0.000
SALL1 Anolis carolinensis ENSACAG00000014399 I 0.000
Afo_R009175 Aptenodytes forsteri Afo_R009175 I 0.000
ENSAMXG00000017702 Astyanax mexicanus ENSAMXG00000017702 I 0.000
ENSAMXG00000018599 Astyanax mexicanus ENSAMXG00000018599 I 0.000
ENSBTAP00000011264-D1 Bos grunniens ENSBTAP00000011264-D1 I 0.000
SALL1 Bos taurus ENSBTAG00000008544 I 0.000
Brh_R007445 Buceros rhinoceros Brh_R007445 I 0.000
SALL1 Callithrix jacchus ENSCJAG00000001740 I 0.000
Aan_R003881 Calypte anna Aan_R003881 I 0.000
Aan_R015320 Calypte anna Aan_R015320 I 0.000
SALL1 Canis familiaris ENSCAFG00000009755 I 0.000
Cmyd_10020158 Chelonia mydas Cmyd_10020158 I 0.000
ENSCSAG00000005319 Chlorocebus sabaeus ENSCSAG00000005319 I 0.000
sall1a Danio rerio ENSDARG00000074319 I 0.000
SALL1 Dasypus novemcinctus ENSDNOG00000016413 I 0.000
ENSDORG00000004249 Dipodomys ordii ENSDORG00000004249 I 0.000
SALL1 Echinops telfairi ENSETEG00000015150 I 0.000
SALL3 Echinops telfairi ENSETEG00000001481 I 0.000
SALL1 Equus caballus ENSECAG00000011334 I 0.000
SALL1 Erinaceus europaeus ENSEEUG00000002014 I 0.000
ENSFALG00000000074 Ficedula albicollis ENSFALG00000000074 I 0.000
ENSGMOG00000006103 Gadus morhua ENSGMOG00000006103 I 0.000
ENSGALG00000003739 Gallus gallus ENSGALG00000003739 I 0.000
Gfo_R010713 Geospiza fortis Gfo_R010713 I 0.000
SALL1 Gorilla gorilla ENSGGOG00000000663 I 0.000
SALL1 Homo sapiens ENSG00000103449 I 0.000
ENSSTOG00000020885 Ictidomys tridecemlineatus ENSSTOG00000020885 I 0.000
ENSLACG00000003556 Latimeria chalumnae ENSLACG00000003556 I 0.000
SALL1 Loxodonta africana ENSLAFG00000015251 I 0.000
ENSP00000251020 Macaca fascicularis ENSP00000251020 I 0.000
ENSMEUG00000012206 Macropus eugenii ENSMEUG00000012206 I 0.000
SALL1 Meleagris gallopavo ENSMGAG00000004704 I 0.000
SALL1 Monodelphis domestica ENSMODG00000013114 I 0.000
ENSMPUG00000003265 Mustela putorius furo ENSMPUG00000003265 I 0.000
Sall1 Mus musculus ENSMUSG00000031665 D 0.000
SALL1 Myotis lucifugus ENSMLUG00000015541 I 0.000
SALL1 Oryctolagus cuniculus ENSOCUG00000004364 I 0.000
SALL1 Pan troglodytes ENSPTRG00000008108 I 0.000
ENSPSIG00000008582 Pelodiscus sinensis ENSPSIG00000008582 I 0.000
Pvit_15502 Pogona vitticeps Pvit_15502 I 0.000
ENSPPYG00000007345 Pongo abelii ENSPPYG00000007345 I 0.000
SALL1 Procavia capensis ENSPCAG00000008162 I 0.000
ENSSHAG00000009477 Sarcophilus harrisii ENSSHAG00000009477 I 0.000
SALL1 Sorex araneus ENSSARG00000000661 I 0.000
SALL1 Sus scrofa ENSSSCG00000002836 I 0.000
Tal_R006196 Tyto alba Tal_R006196 I 0.000
sall3.L Xenopus laevis XB-GENE-866033 I 0.000