HNF1B (Meleagris gallopavo)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSMGAG00000008126 T211490_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HNF1A
M03150_2.00
Homo sapiens
NGTTAATNATTAAYN

NRTTAATNATTAACN
SELEX
Jolma et al.(2013)
HNF1A_1
0.867 0.945
HNF1A
M09144_2.00
Homo sapiens
DGTTAATKATTAACH

DGTTAATMATTAACH
Misc
Kulakovskiy et al.(2013)
HNF1A_HUMAN.H11MO.0.C
0.867 0.945
HNF1A
M10690_2.00
Homo sapiens
RGTTAATDWTTRMHV

BDKYAAWHATTAACY
Transfac
Matys et al.(2006)
V$HNF1_01
0.867 0.945
HNF1A
M10691_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1A_Q4
0.867 0.945
HNF1A
M10692_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1A_Q5
0.867 0.945
HNF1A
M10693_2.00
Homo sapiens
DGBTAATBAWTHAMYWM

KWRKTDAWTVATTAVCH
Transfac
Matys et al.(2006)
V$HNF1_C
0.867 0.945
Hnf1b
M00408_2.00
Mus musculus
NNHWCNNN

NNNGWDNN
PBM
Berger et al.(2008)
Tcf2_0913
0.866 0.964
HNF1B
M03245_2.00
Homo sapiens
GTTAATNATTAAY

RTTAATNATTAAC
SELEX
Jolma et al.(2013)
HNF1B_1
0.866 0.964
HNF1B
M03246_2.00
Homo sapiens
NGTTAATNATTAAYN

NRTTAATNATTAACN
SELEX
Jolma et al.(2013)
HNF1B_2
0.866 0.964
HNF1B
M09168_2.00
Homo sapiens
DGTTAATRATTAACH

DGTTAATYATTAACH
Misc
Kulakovskiy et al.(2013)
HNF1B_HUMAN.H11MO.0.A
0.866 0.964
Hnf1b
M09179_2.00
Mus musculus
DGTTAATRATTAACH

DGTTAATYATTAACH
Misc
Kulakovskiy et al.(2013)
HNF1B_MOUSE.H11MO.0.A
0.866 0.964
HNF1B
M10758_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1B_Q6_01
0.866 0.964
HNF1B
M10759_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1B_Q6
0.866 0.964
HNF1B
M10760_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LFA1_Q6
0.866 0.964
Hnf1a
M00171_2.00
Mus musculus
HTAAYYNN

NNRRTTAD
PBM
Badis et al.(2009)
Tcf1_2666
0.860 0.927
Hnf1a
M00444_2.00
Mus musculus
HTAAYYNNN

NNNRRTTAD
PBM
Berger et al.(2008)
Tcf1_2666
0.860 0.927
Hnf1a
M09191_2.00
Mus musculus
RGTTAATNWTTDMHN

NDKHAAWNATTAACY
Misc
Kulakovskiy et al.(2013)
HNF1A_MOUSE.H11MO.0.A
0.860 0.927
Hmbox1
M00419_2.00
Mus musculus
NNNGWNNN

NNNWCNNN
PBM
Berger et al.(2008)
Hmbox1_2674
0.638 0.382
HMBOX1
M03167_2.00
Homo sapiens
BKTAACTARB

VYTAGTTAMV
SELEX
Jolma et al.(2013)
HMBOX1_1
0.638 0.382
HMBOX1
M05180_2.00
Homo sapiens
BTAACYAGB

VCTRGTTAV
SELEX
Yin et al.(2017)
HMBOX1_eDBD_HT-SELEX
0.638 0.382
HMBOX1
M05181_2.00
Homo sapiens
NTAACTAGB

VCTAGTTAN
SELEX
Yin et al.(2017)
HMBOX1_eDBD_Methyl-HT-SELEX
0.638 0.382
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMGAP00000008313 Homeodomain 231 308

Links

Other Homeodomain family TFs
Other Meleagris gallopavo TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27613.m000644 Ricinus communis 27613.m000644 N 0.000
Bra028970 Brassica rapa Bra028970 N 0.000
Carubv10026264m.g Capsella rubella Carubv10026264m.g N 0.000
GLYMA02G46750 Glycine max GLYMA02G46750 N 0.000
mgf013248m Mimulus guttatus mgf013248m N 0.000