HNF1B (Meleagris gallopavo)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSMGAG00000008126 T211490_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HNF1A
M03150_2.00
Homo sapiens
NGTTAATNATTAAYN

NRTTAATNATTAACN
SELEX
Jolma et al.(2013)
HNF1A_1
0.867 0.945
HNF1A
M09144_2.00
Homo sapiens
DGTTAATKATTAACH

DGTTAATMATTAACH
Misc
Kulakovskiy et al.(2013)
HNF1A_HUMAN.H11MO.0.C
0.867 0.945
HNF1A
M10690_2.00
Homo sapiens
RGTTAATDWTTRMHV

BDKYAAWHATTAACY
Transfac
Matys et al.(2006)
V$HNF1_01
0.867 0.945
HNF1A
M10691_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1A_Q4
0.867 0.945
HNF1A
M10692_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1A_Q5
0.867 0.945
HNF1A
M10693_2.00
Homo sapiens
DGBTAATBAWTHAMYWM

KWRKTDAWTVATTAVCH
Transfac
Matys et al.(2006)
V$HNF1_C
0.867 0.945
Hnf1b
M00408_2.00
Mus musculus
NNHWCNNN

NNNGWDNN
PBM
Berger et al.(2008)
Tcf2_0913
0.866 0.964
HNF1B
M03245_2.00
Homo sapiens
GTTAATNATTAAY

RTTAATNATTAAC
SELEX
Jolma et al.(2013)
HNF1B_1
0.866 0.964
HNF1B
M03246_2.00
Homo sapiens
NGTTAATNATTAAYN

NRTTAATNATTAACN
SELEX
Jolma et al.(2013)
HNF1B_2
0.866 0.964
HNF1B
M09168_2.00
Homo sapiens
DGTTAATRATTAACH

DGTTAATYATTAACH
Misc
Kulakovskiy et al.(2013)
HNF1B_HUMAN.H11MO.0.A
0.866 0.964
Hnf1b
M09179_2.00
Mus musculus
DGTTAATRATTAACH

DGTTAATYATTAACH
Misc
Kulakovskiy et al.(2013)
HNF1B_MOUSE.H11MO.0.A
0.866 0.964
HNF1B
M10758_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1B_Q6_01
0.866 0.964
HNF1B
M10759_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1B_Q6
0.866 0.964
HNF1B
M10760_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LFA1_Q6
0.866 0.964
Hnf1a
M00171_2.00
Mus musculus
HTAAYYNN

NNRRTTAD
PBM
Badis et al.(2009)
Tcf1_2666
0.860 0.927
Hnf1a
M00444_2.00
Mus musculus
HTAAYYNNN

NNNRRTTAD
PBM
Berger et al.(2008)
Tcf1_2666
0.860 0.927
Hnf1a
M09191_2.00
Mus musculus
RGTTAATNWTTDMHN

NDKHAAWNATTAACY
Misc
Kulakovskiy et al.(2013)
HNF1A_MOUSE.H11MO.0.A
0.860 0.927
Hmbox1
M00419_2.00
Mus musculus
NNNGWNNN

NNNWCNNN
PBM
Berger et al.(2008)
Hmbox1_2674
0.638 0.382
HMBOX1
M03167_2.00
Homo sapiens
BKTAACTARB

VYTAGTTAMV
SELEX
Jolma et al.(2013)
HMBOX1_1
0.638 0.382
HMBOX1
M05180_2.00
Homo sapiens
BTAACYAGB

VCTRGTTAV
SELEX
Yin et al.(2017)
HMBOX1_eDBD_HT-SELEX
0.638 0.382
HMBOX1
M05181_2.00
Homo sapiens
NTAACTAGB

VCTAGTTAN
SELEX
Yin et al.(2017)
HMBOX1_eDBD_Methyl-HT-SELEX
0.638 0.382
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMGAP00000008313 Homeodomain 231 308

Links

Other Homeodomain family TFs
Other Meleagris gallopavo TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACRE_040330 Acremonium chrysogenum ACRE_040330 I 0.000
BBA_08843 Beauveria bassiana BBA_08843 I 0.000
CCM_03999 Cordyceps militaris CCM_03999 I 0.000
CFIO01_10968 Colletotrichum fioriniae CFIO01_10968 I 0.000
CGGC5_9646 Colletotrichum gloeosporioides CGGC5_9646 I 0.000
CHGG_05073 Chaetomium globosum CHGG_05073 I 0.000
CMQ_399 Grosmannia clavigera CMQ_399 I 0.000
Cob_02407 Colletotrichum orbiculare Cob_02407 I 0.000
CPUR_02746 Claviceps purpurea CPUR_02746 I 0.000
CSUB01_05498 Colletotrichum sublineola CSUB01_05498 I 0.000
CTHT_0031690 Chaetomium thermophilum CTHT_0031690 I 0.000
estExt_Genewise1.C_150162 Neurospora discreta estExt_Genewise1.C_150162 I 0.000
F503_06010 Ophiostoma piceae uamh F503_06010 I 0.000
FFUJ_09651 Fusarium fujikuroi FFUJ_09651 I 0.000
GGTG_13876 Gaeumannomyces graminis GGTG_13876 I 0.000
GLRG_09080 Colletotrichum graminicola GLRG_09080 I 0.000
HMPREF1624_02413 Sporothrix schenckii HMPREF1624_02413 I 0.000
MAC_04266 Metarhizium acridum MAC_04266 I 0.000
MAJ_01451 Metarhizium majus MAJ_01451 I 0.000
MAM_03050 Metarhizium album MAM_03050 I 0.000
MANI_121221 Metarhizium anisopliae MANI_121221 I 0.000
MAPG_01506 Magnaporthe poae MAPG_01506 I 0.000
MBR_04448 Metarhizium brunneum MBR_04448 I 0.000
MGG_17841 Magnaporthe oryzae MGG_17841 I 0.000
MGU_04014 Metarhizium guizhouense MGU_04014 I 0.000
MYCTH_2299680 Myceliophthora thermophila MYCTH_2299680 I 0.000
NCU10258 Neurospora crassa NCU10258 D 0.000
NEUTE1DRAFT_59287 Neurospora tetrasperma NEUTE1DRAFT_59287 I 0.000
OCS_03476 Ophiocordyceps sinensis OCS_03476 I 0.000
PFICI_12835 Pestalotiopsis fici PFICI_12835 I 0.000
PODANS_3_2470 Podospora anserina PODANS_3_2470 I 0.000
S40285_03485 Stachybotrys chlorohalonata S40285_03485 I 0.000
SAPIO_CDS1545 Scedosporium apiospermum SAPIO_CDS1545 I 0.000
SPBR_03364 Sporothrix brasiliensis SPBR_03364 I 0.000
THITE_2116136 Thielavia terrestris THITE_2116136 I 0.000
TRIATDRAFT_156368 Trichoderma atroviride TRIATDRAFT_156368 I 0.000
TRIREDRAFT_74091 Trichoderma reesei TRIREDRAFT_74091 I 0.000
UV8b_1670 Ustilaginoidea virens UV8b_1670 I 0.000
VDAG_08115 Verticillium dahliae VDAG_08115 I 0.000
VDBG_08450 Verticillium alfalfae VDBG_08450 I 0.000
VDBG_08450 Verticillium albo atrum VDBG_08450 I 0.000
VHEMI09735 Torrubiella hemipterigena VHEMI09735 I 0.000
X797_005481 Metarhizium robertsii X797_005481 I 0.000