PBX1 (Myotis lucifugus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSMLUG00000006941 T211739_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PBX3
M08132_2.00
Homo sapiens
NNNTGAGTGACAGSNNN

NNNSCTGTCACTCANNN
ChIP-seq
Mathelier et al.(2014)
MA1114.1
0.838 0.909
PBX3
M07971_2.00
Homo sapiens
NNBDRCCAATSRVVD

HBBYSATTGGYHVNN
ChIP-seq
Gerstein et al.(2012)
GM12878_PBX3_HudsonAlpha
0.838 0.909
PBX3
M09155_2.00
Homo sapiens
DGABKGRCRGB

VCYGYCMVTCH
Misc
Kulakovskiy et al.(2013)
PBX3_HUMAN.H11MO.0.A
0.838 0.909
PBX3
M09560_2.00
Homo sapiens
NTGABTGACAGB

VCTGTCAVTCAN
Misc
Heinz et al.(2010)
GM12878-PBX3_GSE32465
0.838 0.909
PBX3
M10732_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX3_02
0.838 0.909
PBX3
M10733_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX3_03
0.838 0.909
PBX3
M10734_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX3_04
0.838 0.909
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMLUP00000006342 Homeodomain 148 196
ENSMLUP00000006342 Homeodomain 208 227

Links

Other Homeodomain family TFs
Other Myotis lucifugus TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PBX3 Gorilla gorilla ENSGGOG00000009025 I 0.838
PBX3 Pteropus vampyrus ENSPVAG00000000742 I 0.838
PBX3 Homo sapiens ENSG00000167081 D 0.838
ENSNLEG00000017398 Nomascus leucogenys ENSNLEG00000017398 I 0.838
PBX1 Oryctolagus cuniculus ENSOCUG00000007609 I 0.830
ENSP00000362586-D3 Bos grunniens ENSP00000362586-D3 I 0.830
ENSP00000362586 Macaca fascicularis ENSP00000362586 I 0.829
PBX3 Procavia capensis ENSPCAG00000006303 I 0.828
ENSAMEG00000016625 Ailuropoda melanoleuca ENSAMEG00000016625 I 0.820
pbx3b Oryzias latipes ENSORLG00000013269 I 0.819
TsM_000683000 Taenia solium TsM_000683000 I 0.818
pbx3b Takifugu rubripes ENSTRUG00000008751 I 0.813
pbx3b Gasterosteus aculeatus ENSGACG00000011999 I 0.809
PBX2 Echinops telfairi ENSETEG00000018718 I 0.745
maker-nMf.1.1.scaf02297-augustus-gene-0.11 Meloidogyne floridensis maker-nMf.1.1.scaf02297-augustus-gene-0.11 I 0.683
CRE23691 Caenorhabditis remanei CRE23691 I 0.665
CapteG223738 Capitella teleta CapteG223738 I 0.660
PBX3 Echinops telfairi ENSETEG00000012611 I 0.655
ENSDORG00000000463 Dipodomys ordii ENSDORG00000000463 I 0.655
BGLB003173 Biomphalaria glabrata BGLB003173 I 0.602