|
Hoxa10
(Mus musculus)
Homeodomain
|
TF Information |
Pfam ID |
Interpro ID |
Gene ID |
CIS-BP ID |
Sequence source |
Animal TF db |
PF00046 (Homeobox) |
IPR001356 |
ENSMUSG00000000938 |
T212382_2.00 |
Ensembl (2018-Dec-8) |
Link out |
NCBI Gene Info:In vertebrates, the genes encoding the class of transcription factors called homeobox genes are found in clusters named A, B, C, and D on four separate chromosomes. Expression of these proteins is spatially and temporally regulated during embryonic development. This gene is part of a cluster on chromosome 6 and encodes a DNA-binding transcription factor that may regulate gene expression, morphogenesis, and differentiation. More specifically, it may function in fertility, embryo viability, and regulation of hematopoietic lineage commitment. Alternatively spliced transcript variants encoding different isoforms have been described. [provided by RefSeq, Jul 2008] |
Directly determined binding motifs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
Hoxa10 M00382_2.00 |
Mus musculus |
NHWAYNNNN |
NNNNRTWDN |
PBM
Berger et al.(2008)
Hoxa10_2318 |
(Direct) |
(Direct) |
Hoxa10 M09170_2.00 |
Mus musculus |
DCATAAAYYRBH |
DVYRRTTTATGH |
Misc
Kulakovskiy et al.(2013)
HXA10_MOUSE.H11MO.0.C |
(Direct) |
(Direct) |
Hoxa10 M10763_2.00 |
Mus musculus |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXA10_Q5 |
(Direct) |
(Direct) |
Motifs from related TFs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
HOXA10
M05394_2.00 |
Homo sapiens |
RRTCGTAAAAH |
DTTTTACGAYY |
SELEX
Yin et al.(2017)
HOXA10_eDBD_HT-SELEX_1
|
0.867
|
1.000
|
HOXA10
M05395_2.00 |
Homo sapiens |
NTTTTATKRCY |
RGYMATAAAAN |
SELEX
Yin et al.(2017)
HOXA10_eDBD_HT-SELEX_2
|
0.867
|
1.000
|
HOXA10
M05398_2.00 |
Homo sapiens |
NRTCRTWAANN |
NNTTWAYGAYN |
SELEX
Yin et al.(2017)
HOXA10_FL_HT-SELEX_1
|
0.867
|
1.000
|
HOXA10
M05399_2.00 |
Homo sapiens |
NNTTWATKRCN |
NGYMATWAANN |
SELEX
Yin et al.(2017)
HOXA10_FL_HT-SELEX_2
|
0.867
|
1.000
|
HOXA10
M05396_2.00 |
Homo sapiens |
NGTCGTAAAWN |
NWTTTACGACN |
SELEX
Yin et al.(2017)
HOXA10_eDBD_Methyl-HT-SELEX_1
|
0.867
|
1.000
|
HOXA10
M05397_2.00 |
Homo sapiens |
NTTTTATKRCB |
VGYMATAAAAN |
SELEX
Yin et al.(2017)
HOXA10_eDBD_Methyl-HT-SELEX_2
|
0.867
|
1.000
|
HOXA10
M05400_2.00 |
Homo sapiens |
NRTCGTWAANN |
NNTTWACGAYN |
SELEX
Yin et al.(2017)
HOXA10_FL_Methyl-HT-SELEX_1
|
0.867
|
1.000
|
HOXA10
M05401_2.00 |
Homo sapiens |
NNTTWATKRYN |
NRYMATWAANN |
SELEX
Yin et al.(2017)
HOXA10_FL_Methyl-HT-SELEX_2
|
0.867
|
1.000
|
Hoxd10
M00509_2.00 |
Mus musculus |
NNNNNNNN |
NNNNNNNN |
PBM
Berger et al.(2008)
Hoxd10_2368
|
0.865
|
0.965
|
HOXD10
M05112_2.00 |
Homo sapiens |
NKTTTATKRC |
GYMATAAAMN |
SELEX
Yin et al.(2017)
HOXD10_eDBD_HT-SELEX_1
|
0.865
|
0.965
|
HOXD10
M05113_2.00 |
Homo sapiens |
RTCGTAAAHN |
NDTTTACGAY |
SELEX
Yin et al.(2017)
HOXD10_eDBD_HT-SELEX_2
|
0.865
|
0.965
|
HOXD10
M05116_2.00 |
Homo sapiens |
RGTCGTAAAAH |
DTTTTACGACY |
SELEX
Yin et al.(2017)
HOXD10_FL_HT-SELEX_1
|
0.865
|
0.965
|
HOXD10
M05117_2.00 |
Homo sapiens |
RRYMATAAAAH |
DTTTTATKRYY |
SELEX
Yin et al.(2017)
HOXD10_FL_HT-SELEX_2
|
0.865
|
0.965
|
HOXD10
M10687_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXD10_Q2
|
0.865
|
0.965
|
HOXD10
M10688_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXD10_Q6
|
0.865
|
0.965
|
HOXD10
M05114_2.00 |
Homo sapiens |
NTTTTATKRC |
GYMATAAAAN |
SELEX
Yin et al.(2017)
HOXD10_eDBD_Methyl-HT-SELEX_1
|
0.865
|
0.965
|
HOXD10
M05115_2.00 |
Homo sapiens |
GTCGTAAAHN |
NDTTTACGAC |
SELEX
Yin et al.(2017)
HOXD10_eDBD_Methyl-HT-SELEX_2
|
0.865
|
0.965
|
HOXD10
M05118_2.00 |
Homo sapiens |
VGTCGTAAAAH |
DTTTTACGACB |
SELEX
Yin et al.(2017)
HOXD10_FL_Methyl-HT-SELEX_1
|
0.865
|
0.965
|
HOXD10
M05119_2.00 |
Homo sapiens |
DGYAATAAAAH |
DTTTTATTRCH |
SELEX
Yin et al.(2017)
HOXD10_FL_Methyl-HT-SELEX_2
|
0.865
|
0.965
|
Hoxc10
M00421_2.00 |
Mus musculus |
TTWATKAB |
VTMATWAA |
PBM
Berger et al.(2008)
Hoxc10_2779
|
0.847
|
0.930
|
HOXC10
M03228_2.00 |
Homo sapiens |
DTTTWATKDB |
VHMATWAAAH |
SELEX
Jolma et al.(2013)
HOXC10_1
|
0.847
|
0.930
|
HOXC10
M03229_2.00 |
Homo sapiens |
NNTTWATKRB |
VYMATWAANN |
SELEX
Jolma et al.(2013)
HOXC10_2
|
0.847
|
0.930
|
HOXC10
M03230_2.00 |
Homo sapiens |
NWTTWAYGAB |
VTCRTWAAWN |
SELEX
Jolma et al.(2013)
HOXC10_3
|
0.847
|
0.930
|
Hoxc10
M03252_2.00 |
Mus musculus |
DTTTWAYGAY |
RTCRTWAAAH |
SELEX
Jolma et al.(2013)
Hoxc10_1
|
0.847
|
0.930
|
Hoxc10
M03253_2.00 |
Mus musculus |
DTTTWATKRY |
RYMATWAAAH |
SELEX
Jolma et al.(2013)
Hoxc10_2
|
0.847
|
0.930
|
HOXC10
M05335_2.00 |
Homo sapiens |
NDTTTATKRCN |
NGYMATAAAHN |
SELEX
Yin et al.(2017)
HOXC10_eDBD_HT-SELEX_1
|
0.847
|
0.930
|
HOXC10
M05336_2.00 |
Homo sapiens |
NRTCGTAAAHN |
NDTTTACGAYN |
SELEX
Yin et al.(2017)
HOXC10_eDBD_HT-SELEX_2
|
0.847
|
0.930
|
HOXC10
M05339_2.00 |
Homo sapiens |
NTTTTATKRCN |
NGYMATAAAAN |
SELEX
Yin et al.(2017)
HOXC10_FL_HT-SELEX_1
|
0.847
|
0.930
|
HOXC10
M05340_2.00 |
Homo sapiens |
NRTCGTAAAWN |
NWTTTACGAYN |
SELEX
Yin et al.(2017)
HOXC10_FL_HT-SELEX_2
|
0.847
|
0.930
|
HOXC10
M05337_2.00 |
Homo sapiens |
NTTTTATKRCN |
NGYMATAAAAN |
SELEX
Yin et al.(2017)
HOXC10_eDBD_Methyl-HT-SELEX_1
|
0.847
|
0.930
|
HOXC10
M05338_2.00 |
Homo sapiens |
NRTCGTAAAHN |
NDTTTACGAYN |
SELEX
Yin et al.(2017)
HOXC10_eDBD_Methyl-HT-SELEX_2
|
0.847
|
0.930
|
HOXC10
M05341_2.00 |
Homo sapiens |
DTTTTATKRCH |
DGYMATAAAAH |
SELEX
Yin et al.(2017)
HOXC10_FL_Methyl-HT-SELEX_1
|
0.847
|
0.930
|
HOXC10
M05342_2.00 |
Homo sapiens |
VGTCGTAAAHN |
NDTTTACGACB |
SELEX
Yin et al.(2017)
HOXC10_FL_Methyl-HT-SELEX_2
|
0.847
|
0.930
|
Hoxa9
M00475_2.00 |
Mus musculus |
NNDDBNNN |
NNNVHHNN |
PBM
Berger et al.(2008)
Hoxa9_2622
|
0.804
|
0.842
|
HOXA9
M03085_2.00 |
Homo sapiens |
NNDTTWAYGAYN |
NRTCRTWAAHNN |
SELEX
Jolma et al.(2013)
HOXA10_1
|
0.804
|
0.842
|
HOXA9
M03086_2.00 |
Homo sapiens |
NDTTWATKRYN |
NRYMATWAAHN |
SELEX
Jolma et al.(2013)
HOXA10_2
|
0.804
|
0.842
|
HOXA9
M04932_2.00 |
Homo sapiens |
NNDWWABKRC |
GYMVTWWHNN |
SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_1
|
0.804
|
0.842
|
HOXA9
M04933_2.00 |
Homo sapiens |
NNDTWAYGRB |
VYCRTWAHNN |
SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_2
|
0.804
|
0.842
|
Hoxa9
M08138_2.00 |
Mus musculus |
TGATTKATKRB |
VYMATMAATCA |
ChIP-seq
Mathelier et al.(2014)
MA0594.1
|
0.804
|
0.842
|
HOXA9
M09130_2.00 |
Homo sapiens |
DCATAAAYYRBH |
DVYRRTTTATGH |
Misc
Kulakovskiy et al.(2013)
HXA10_HUMAN.H11MO.0.C
|
0.804
|
0.842
|
HOXA9
M09131_2.00 |
Homo sapiens |
HHATAAATCAH |
DTGATTTATDD |
Misc
Kulakovskiy et al.(2013)
HXA9_HUMAN.H11MO.0.B
|
0.804
|
0.842
|
Hoxa9
M09203_2.00 |
Mus musculus |
HHATAAATCAH |
DTGATTTATDD |
Misc
Kulakovskiy et al.(2013)
HXA9_MOUSE.H11MO.0.B
|
0.804
|
0.842
|
Hoxa9
M09575_2.00 |
Mus musculus |
WGATTKATDRBY |
RVYHATMAATCW |
Misc
Heinz et al.(2010)
HSC-Hoxa9_GSE33509
|
0.804
|
0.842
|
HOXA9
M10642_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXA10_Q6
|
0.804
|
0.842
|
HOXA9
M10643_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXA9_04
|
0.804
|
0.842
|
HOXA9
M10644_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXA9_Q5_01
|
0.804
|
0.842
|
HOXA9
M10645_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXA9_Q5
|
0.804
|
0.842
|
HOXA9
M04934_2.00 |
Homo sapiens |
NNDTWAYKRC |
GYMRTWAHNN |
SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_1
|
0.804
|
0.842
|
HOXA9
M04935_2.00 |
Homo sapiens |
NNDTWACGAY |
RTCGTWAHNN |
SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_2
|
0.804
|
0.842
|
Hoxd9
M03282_2.00 |
Mus musculus |
TTTWATKKB |
VMMATWAAA |
SELEX
Jolma et al.(2013)
Hoxd9_1
|
0.804
|
0.825
|
Hoxd9
M03283_2.00 |
Mus musculus |
DWTTWATKRY |
RYMATWAAWH |
SELEX
Jolma et al.(2013)
Hoxd9_2
|
0.804
|
0.825
|
Hoxd9
M03284_2.00 |
Mus musculus |
DTTWAYGRB |
VYCRTWAAH |
SELEX
Jolma et al.(2013)
Hoxd9_3
|
0.804
|
0.825
|
HOXC9
M05331_2.00 |
Homo sapiens |
GTCGTAAAAN |
NTTTTACGAC |
SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_1
|
0.804
|
0.825
|
HOXC9
M05332_2.00 |
Homo sapiens |
NTTTTATKRC |
GYMATAAAAN |
SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_2
|
0.804
|
0.825
|
HOXD9
M05104_2.00 |
Homo sapiens |
NTTTTATKRC |
GYMATAAAAN |
SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_1
|
0.804
|
0.825
|
HOXD9
M05105_2.00 |
Homo sapiens |
RTCRTAAAWN |
NWTTTAYGAY |
SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_2
|
0.804
|
0.825
|
HOXD9
M05108_2.00 |
Homo sapiens |
RTCGTAAAWN |
NWTTTACGAY |
SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_1
|
0.804
|
0.825
|
HOXD9
M05109_2.00 |
Homo sapiens |
NTTTTATKRC |
GYMATAAAAN |
SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_2
|
0.804
|
0.825
|
HOXC9
M09161_2.00 |
Homo sapiens |
HTTWATKGCH |
DGCMATWAAD |
Misc
Kulakovskiy et al.(2013)
HXC9_HUMAN.H11MO.0.C
|
0.804
|
0.825
|
HOXD9
M10686_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXD9_Q2
|
0.804
|
0.825
|
HOXC9
M05333_2.00 |
Homo sapiens |
RTCGTAAAHN |
NDTTTACGAY |
SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_1
|
0.804
|
0.825
|
HOXC9
M05334_2.00 |
Homo sapiens |
NTTTWATKRC |
GYMATWAAAN |
SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_2
|
0.804
|
0.825
|
HOXD9
M05106_2.00 |
Homo sapiens |
NNTTWATKRC |
GYMATWAANN |
SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_1
|
0.804
|
0.825
|
HOXD9
M05107_2.00 |
Homo sapiens |
RTCGTAAANN |
NNTTTACGAY |
SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_2
|
0.804
|
0.825
|
HOXD9
M05110_2.00 |
Homo sapiens |
RTCGTAAANN |
NNTTTACGAY |
SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_1
|
0.804
|
0.825
|
HOXD9
M05111_2.00 |
Homo sapiens |
NDTTWATKRC |
GYMATWAAHN |
SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_2
|
0.804
|
0.825
|
Hoxb9
M00410_2.00 |
Mus musculus |
NTTWAYDDNN |
NNHHRTWAAN |
PBM
Berger et al.(2008)
Hoxb9_3413
|
0.804
|
0.807
|
HOXB9
M05289_2.00 |
Homo sapiens |
RTCRTAAAWN |
NWTTTAYGAY |
SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_1
|
0.804
|
0.807
|
HOXB9
M05290_2.00 |
Homo sapiens |
NTTTWATKRC |
GYMATWAAAN |
SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_2
|
0.804
|
0.807
|
HOXB9
M05291_2.00 |
Homo sapiens |
GTCGTAAAHB |
VDTTTACGAC |
SELEX
Yin et al.(2017)
HOXB9_eDBD_Methyl-HT-SELEX
|
0.804
|
0.807
|
Hoxc9
M00470_2.00 |
Mus musculus |
NGTAATWAAN |
NTTWATTACN |
PBM
Berger et al.(2008)
Hoxc9_2367
|
0.796
|
0.807
|
Hoxc9
M08137_2.00 |
Mus musculus |
NWGATTTATDGSH |
DSCHATAAATCWN |
ChIP-seq
Mathelier et al.(2014)
MA0485.1
|
0.796
|
0.807
|
Hoxc9
M09574_2.00 |
Mus musculus |
TGATTTATDGCH |
DGCHATAAATCA |
Misc
Heinz et al.(2010)
Ainv15-Hoxc9_GSE21812
|
0.796
|
0.807
|
Hoxd11
M00493_2.00 |
Mus musculus |
DDDNNNNN |
NNNNNHHH |
PBM
Berger et al.(2008)
Hoxd11_3873
|
0.764
|
0.719
|
HOXD11
M03139_2.00 |
Homo sapiens |
RTCGTAAAWH |
DWTTTACGAY |
SELEX
Jolma et al.(2013)
HOXD11_1
|
0.764
|
0.719
|
HOXD11
M03140_2.00 |
Homo sapiens |
TTTWATKRBH |
DVYMATWAAA |
SELEX
Jolma et al.(2013)
HOXD11_2
|
0.764
|
0.719
|
HOXD11
M05120_2.00 |
Homo sapiens |
NRTCGTWAANNDTWAH |
DTWAHNNTTWACGAYN |
SELEX
Yin et al.(2017)
HOXD11_eDBD_HT-SELEX
|
0.764
|
0.719
|
HOXD11
M05121_2.00 |
Homo sapiens |
NRTCGTWAAHNDTWAH |
DTWAHNDTTWACGAYN |
SELEX
Yin et al.(2017)
HOXD11_eDBD_Methyl-HT-SELEX
|
0.764
|
0.719
|
Hoxc11
M00390_2.00 |
Mus musculus |
NTTWAYDDBN |
NVHHRTWAAN |
PBM
Berger et al.(2008)
Hoxc11_3718
|
0.764
|
0.702
|
Hoxa11
M00474_2.00 |
Mus musculus |
NNHNHNNNN |
NNNNDNDNN |
PBM
Berger et al.(2008)
Hoxa11_2218
|
0.764
|
0.702
|
HOXC11
M03131_2.00 |
Homo sapiens |
NWTTWAYGAYH |
DRTCRTWAAWN |
SELEX
Jolma et al.(2013)
HOXC11_1
|
0.764
|
0.702
|
HOXC11
M03132_2.00 |
Homo sapiens |
NWTTWATKRBH |
DVYMATWAAWN |
SELEX
Jolma et al.(2013)
HOXC11_2
|
0.764
|
0.702
|
HOXC11
M03133_2.00 |
Homo sapiens |
DRTCGTWAAWN |
NWTTWACGAYH |
SELEX
Jolma et al.(2013)
HOXC11_3
|
0.764
|
0.702
|
HOXC11
M03134_2.00 |
Homo sapiens |
NTTTTATKRBN |
NVYMATAAAAN |
SELEX
Jolma et al.(2013)
HOXC11_4
|
0.764
|
0.702
|
Hoxa11
M03274_2.00 |
Mus musculus |
NNDTTWAYGABN |
NVTCRTWAAHNN |
SELEX
Jolma et al.(2013)
Hoxa11_1
|
0.764
|
0.702
|
Hoxa11
M03275_2.00 |
Mus musculus |
NDTTWATKRNN |
NNYMATWAAHN |
SELEX
Jolma et al.(2013)
Hoxa11_2
|
0.764
|
0.702
|
HOXA11
M04897_2.00 |
Homo sapiens |
VGTCGTAAAWH |
DWTTTACGACB |
SELEX
Yin et al.(2017)
HOXA11_eDBD_HT-SELEX_1
|
0.764
|
0.702
|
HOXA11
M04898_2.00 |
Homo sapiens |
DDTTWATKRSN |
NSYMATWAAHH |
SELEX
Yin et al.(2017)
HOXA11_eDBD_HT-SELEX_2
|
0.764
|
0.702
|
HOXC11
M05075_2.00 |
Homo sapiens |
NDTTWACGAYN |
NRTCGTWAAHN |
SELEX
Yin et al.(2017)
HOXC11_eDBD_HT-SELEX_1
|
0.764
|
0.702
|
HOXC11
M05076_2.00 |
Homo sapiens |
NWTTWATKRCH |
DGYMATWAAWN |
SELEX
Yin et al.(2017)
HOXC11_eDBD_HT-SELEX_2
|
0.764
|
0.702
|
HOXC11
M05079_2.00 |
Homo sapiens |
NRTCGTWAAHN |
NDTTWACGAYN |
SELEX
Yin et al.(2017)
HOXC11_FL_HT-SELEX_1
|
0.764
|
0.702
|
HOXC11
M05080_2.00 |
Homo sapiens |
NDTTWATKRSN |
NSYMATWAAHN |
SELEX
Yin et al.(2017)
HOXC11_FL_HT-SELEX_2
|
0.764
|
0.702
|
HOXA11
M04899_2.00 |
Homo sapiens |
NRTCGTAAAWH |
DWTTTACGAYN |
SELEX
Yin et al.(2017)
HOXA11_eDBD_Methyl-HT-SELEX_1
|
0.764
|
0.702
|
HOXA11
M04900_2.00 |
Homo sapiens |
DYTTTATKRCH |
DGYMATAAARH |
SELEX
Yin et al.(2017)
HOXA11_eDBD_Methyl-HT-SELEX_2
|
0.764
|
0.702
|
HOXC11
M05077_2.00 |
Homo sapiens |
NRTCGTAAAHN |
NDTTTACGAYN |
SELEX
Yin et al.(2017)
HOXC11_eDBD_Methyl-HT-SELEX_1
|
0.764
|
0.702
|
HOXC11
M05078_2.00 |
Homo sapiens |
NDTTTATKRSN |
NSYMATAAAHN |
SELEX
Yin et al.(2017)
HOXC11_eDBD_Methyl-HT-SELEX_2
|
0.764
|
0.702
|
HOXC11
M05081_2.00 |
Homo sapiens |
NRTCGTWAANN |
NNTTWACGAYN |
SELEX
Yin et al.(2017)
HOXC11_FL_Methyl-HT-SELEX_1
|
0.764
|
0.702
|
HOXC11
M05082_2.00 |
Homo sapiens |
NNTTWAYKRSN |
NSYMRTWAANN |
SELEX
Yin et al.(2017)
HOXC11_FL_Methyl-HT-SELEX_2
|
0.764
|
0.702
|
Abd-B
M00554_2.00 |
Drosophila melanogaster |
NWTWAYDDNN |
NNHHRTWAWN |
PBM
Busser et al.(2012a)
Abd-B
|
0.651
|
0.702
|
Abd-B
M03772_2.00 |
Drosophila melanogaster |
DRTCRTAAAWH |
DWTTTAYGAYH |
SELEX
Nitta et al.(2015)
Abd-B_1
|
0.651
|
0.702
|
Abd-B
M03773_2.00 |
Drosophila melanogaster |
DTTTTATKRCY |
RGYMATAAAAH |
SELEX
Nitta et al.(2015)
Abd-B_2
|
0.651
|
0.702
|
Abd-B
M03774_2.00 |
Drosophila melanogaster |
NKCARYAACGACYW |
WRGTCGTTRYTGMN |
SELEX
Nitta et al.(2015)
Abd-B_3
|
0.651
|
0.702
|
Abd-B
M03775_2.00 |
Drosophila melanogaster |
DTTTWATGKSTTTY |
RAAASMCATWAAAH |
SELEX
Nitta et al.(2015)
Abd-B_4
|
0.651
|
0.702
|
Abd-B
M06476_2.00 |
Drosophila melanogaster |
TTTATKR |
YMATAAA |
B1H
Mathelier et al.(2014)
MA0165.1
|
0.651
|
0.702
|
Abd-B
M06211_2.00 |
Drosophila melanogaster |
YCATAAAA |
TTTTATGR |
B1H
Zhu et al.(2011)
Abd-B_FlyReg_FBgn0000015
|
0.651
|
0.702
|
Abd-B
M09672_2.00 |
Drosophila melanogaster |
YMATAAAAHH |
DDTTTTATKR |
Misc
Kulakovskiy et al.(2009)
Abd-B
|
0.651
|
0.702
|
Abd-B
M10779_2.00 |
Drosophila melanogaster |
VSNTTDATKRCNNN |
NNNGYMATHAANSB |
Transfac
Matys et al.(2006)
I$ABDB_01
|
0.651
|
0.702
|
Abd-B
M10780_2.00 |
Drosophila melanogaster |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
I$ABDB_Q6
|
0.651
|
0.702
|
abd-A
M03770_2.00 |
Drosophila melanogaster |
NNTAATKRCN |
NGYMATTANN |
SELEX
Nitta et al.(2015)
abd-A_1
|
0.623
|
0.702
|
abd-A
M03771_2.00 |
Drosophila melanogaster |
NNTAATKRCN |
NGYMATTANN |
SELEX
Nitta et al.(2015)
abd-A_2
|
0.623
|
0.702
|
abd-A
M06475_2.00 |
Drosophila melanogaster |
TTAATKA |
TMATTAA |
B1H
Mathelier et al.(2014)
MA0206.1
|
0.623
|
0.702
|
abd-A
M06210_2.00 |
Drosophila melanogaster |
WTWATKDM |
KHMATWAW |
B1H
Zhu et al.(2011)
Abd-A_FlyReg_FBgn0000014
|
0.623
|
0.702
|
abd-A
M09671_2.00 |
Drosophila melanogaster |
HTAATKRH |
DYMATTAD |
Misc
Kulakovskiy et al.(2009)
abd-A
|
0.623
|
0.702
|
abd-A
M10778_2.00 |
Drosophila melanogaster |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
I$ABDA_Q6
|
0.623
|
0.702
|
Ubx
M00558_2.00 |
Drosophila melanogaster |
NWWAYDDNN |
NNHHRTWWN |
PBM
Busser et al.(2012a)
Ubx
|
0.614
|
0.667
|
Ubx
M03804_2.00 |
Drosophila melanogaster |
NTAATKRH |
DYMATTAN |
SELEX
Nitta et al.(2015)
Ubx_1
|
0.614
|
0.667
|
Ubx
M06499_2.00 |
Drosophila melanogaster |
NTTAATKR |
YMATTAAN |
B1H
Mathelier et al.(2014)
MA0094.2
|
0.614
|
0.667
|
Ubx
M06273_2.00 |
Drosophila melanogaster |
NTTAATKR |
YMATTAAN |
B1H
Zhu et al.(2011)
Ubx_Cell_FBgn0003944
|
0.614
|
0.667
|
Ubx
M06274_2.00 |
Drosophila melanogaster |
TAATKD |
HMATTA |
B1H
Zhu et al.(2011)
Ubx_FlyReg_FBgn0003944
|
0.614
|
0.667
|
Ubx
M06275_2.00 |
Drosophila melanogaster |
NTTWATKR |
YMATWAAN |
B1H
Zhu et al.(2011)
Ubx_SOLEXA_FBgn0003944
|
0.614
|
0.667
|
Ubx
M09680_2.00 |
Drosophila melanogaster |
TTAATKR |
YMATTAA |
Misc
Kulakovskiy et al.(2009)
Ubx
|
0.614
|
0.667
|
Ubx
M10788_2.00 |
Drosophila melanogaster |
NNVNNNNTAATKRNBHNND |
HNNDVNYMATTANNNNBNN |
Transfac
Matys et al.(2006)
I$UBX_01
|
0.614
|
0.667
|
CBG00023
M02062_2.00 |
Caenorhabditis briggsae |
NWWATKDNNN |
NNNHMATWWN |
PBM
Weirauch et al.(2014)
pTH5778
|
0.608
|
0.491
|
egl-5
M09581_2.00 |
Caenorhabditis elegans |
DWTTWATGGS |
SCCATWAAWH |
Misc
Heinz et al.(2010)
cElegans-L3-EGL5_modEncode
|
0.608
|
0.491
|
Hoxa6
M00494_2.00 |
Mus musculus |
NWWATKRNN |
NNYMATWWN |
PBM
Berger et al.(2008)
Hoxa6_1040
|
0.607
|
0.684
|
HOXA6
M04974_2.00 |
Homo sapiens |
NNTAATKRVN |
NBYMATTANN |
SELEX
Yin et al.(2017)
HOXA6_eDBD_HT-SELEX
|
0.607
|
0.684
|
HOXA6
M04975_2.00 |
Homo sapiens |
NNTAATKRBN |
NVYMATTANN |
SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_1
|
0.607
|
0.684
|
HOXA6
M04976_2.00 |
Homo sapiens |
NTAAYGRY |
RYCRTTAN |
SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_2
|
0.607
|
0.684
|
Hoxc6
M00392_2.00 |
Mus musculus |
TTAATTAB |
VTAATTAA |
PBM
Berger et al.(2008)
Hoxc6_3954
|
0.607
|
0.667
|
Q8I9J5_9BILA
M02214_2.00 |
Spadella cephaloptera |
NVTAWTWABN |
NVTWAWTABN |
PBM
Weirauch et al.(2014)
pTH6164
|
0.605
|
0.579
|
Hoxc8
M00391_2.00 |
Mus musculus |
NNDNYNNNN |
NNNNRNHNN |
PBM
Berger et al.(2008)
Hoxc8_3429
|
0.605
|
0.702
|
Hoxd8
M00436_2.00 |
Mus musculus |
NNWWYNNN |
NNNRWWNN |
PBM
Berger et al.(2008)
Hoxd8_2644
|
0.605
|
0.702
|
Hoxb8
M00517_2.00 |
Mus musculus |
NWWAYNDNN |
NNHNRTWWN |
PBM
Berger et al.(2008)
Hoxb8_3780
|
0.605
|
0.702
|
HOXD8
M03221_2.00 |
Homo sapiens |
VHWAATKWDN |
NHWMATTWDB |
SELEX
Jolma et al.(2013)
HOXD8_1
|
0.605
|
0.702
|
HOXB8
M05048_2.00 |
Homo sapiens |
NTAATKRM |
KYMATTAN |
SELEX
Yin et al.(2017)
HOXB8_eDBD_HT-SELEX
|
0.605
|
0.702
|
HOXC8
M04912_2.00 |
Homo sapiens |
NYAATTRN |
NYAATTRN |
SELEX
Yin et al.(2017)
HOXC8_FL_HT-SELEX
|
0.605
|
0.702
|
HOXD8
M05310_2.00 |
Homo sapiens |
BTAATKRY |
RYMATTAV |
SELEX
Yin et al.(2017)
HOXD8_eDBD_HT-SELEX
|
0.605
|
0.702
|
HOXB8
M09141_2.00 |
Homo sapiens |
BMATHAATCAA |
TTGATTDATKV |
Misc
Kulakovskiy et al.(2013)
HXB8_HUMAN.H11MO.0.C
|
0.605
|
0.702
|
Hoxb8
M09214_2.00 |
Mus musculus |
BMATHAATCAA |
TTGATTDATKV |
Misc
Kulakovskiy et al.(2013)
HXB8_MOUSE.H11MO.0.C
|
0.605
|
0.702
|
HOXC8
M10636_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HOXC8_Q3
|
0.605
|
0.702
|
HOXB8
M05049_2.00 |
Homo sapiens |
NTAATKRN |
NYMATTAN |
SELEX
Yin et al.(2017)
HOXB8_eDBD_Methyl-HT-SELEX_1
|
0.605
|
0.702
|
HOXB8
M05050_2.00 |
Homo sapiens |
NTAAYGAY |
RTCRTTAN |
SELEX
Yin et al.(2017)
HOXB8_eDBD_Methyl-HT-SELEX_2
|
0.605
|
0.702
|
HOXC8
M04913_2.00 |
Homo sapiens |
NYMATKRN |
NYMATKRN |
SELEX
Yin et al.(2017)
HOXC8_FL_Methyl-HT-SELEX_1
|
0.605
|
0.702
|
HOXC8
M04914_2.00 |
Homo sapiens |
NTWAYGRY |
RYCRTWAN |
SELEX
Yin et al.(2017)
HOXC8_FL_Methyl-HT-SELEX_2
|
0.605
|
0.702
|
HOXD8
M05311_2.00 |
Homo sapiens |
NTAATKRN |
NYMATTAN |
SELEX
Yin et al.(2017)
HOXD8_eDBD_Methyl-HT-SELEX_1
|
0.605
|
0.702
|
HOXD8
M05312_2.00 |
Homo sapiens |
NTWAYGRY |
RYCRTWAN |
SELEX
Yin et al.(2017)
HOXD8_eDBD_Methyl-HT-SELEX_2
|
0.605
|
0.702
|
Hoxc12
M00508_2.00 |
Mus musculus |
NDTWAYNDBN |
NVHNRTWAHN |
PBM
Berger et al.(2008)
Hoxc12_3480
|
0.603
|
0.632
|
HOXC12
M03135_2.00 |
Homo sapiens |
TTTTATTRY |
RYAATAAAA |
SELEX
Jolma et al.(2013)
HOXC12_1
|
0.603
|
0.632
|
HOXC12
M03136_2.00 |
Homo sapiens |
RRTCGTAAAAH |
DTTTTACGAYY |
SELEX
Jolma et al.(2013)
HOXC12_2
|
0.603
|
0.632
|
HOXC12
M05083_2.00 |
Homo sapiens |
NGYAATAAAAN |
NTTTTATTRCN |
SELEX
Yin et al.(2017)
HOXC12_eDBD_HT-SELEX_1
|
0.603
|
0.632
|
HOXC12
M05084_2.00 |
Homo sapiens |
VRTCGTAAAHN |
NDTTTACGAYB |
SELEX
Yin et al.(2017)
HOXC12_eDBD_HT-SELEX_2
|
0.603
|
0.632
|
HOXC12
M05085_2.00 |
Homo sapiens |
NGYAATAAAAH |
DTTTTATTRCN |
SELEX
Yin et al.(2017)
HOXC12_eDBD_Methyl-HT-SELEX_1
|
0.603
|
0.632
|
HOXC12
M05086_2.00 |
Homo sapiens |
NRTCGTAAAHH |
DDTTTACGAYN |
SELEX
Yin et al.(2017)
HOXC12_eDBD_Methyl-HT-SELEX_2
|
0.603
|
0.632
|
Hoxd12_CONSTRUCT
M00538_2.00 |
PBM CONSTRUCTS |
NWTWAYNDBN |
NVHNRTWAWN |
PBM
Berger et al.(2008)
Hoxd12_3481
|
0.603
|
0.614
|
HOXD12
M03206_2.00 |
Homo sapiens |
SYAATAAAA |
TTTTATTRS |
SELEX
Jolma et al.(2013)
HOXD12_1
|
0.603
|
0.614
|
HOXD12
M03207_2.00 |
Homo sapiens |
RVTCGTAAAAH |
DTTTTACGABY |
SELEX
Jolma et al.(2013)
HOXD12_2
|
0.603
|
0.614
|
HOXD12
M03208_2.00 |
Homo sapiens |
NRTCGTAAAHN |
NDTTTACGAYN |
SELEX
Jolma et al.(2013)
HOXD12_3
|
0.603
|
0.614
|
HOXD12
M03209_2.00 |
Homo sapiens |
DTTWATYRC |
GYRATWAAH |
SELEX
Jolma et al.(2013)
HOXD12_4
|
0.603
|
0.614
|
HOXD12
M05279_2.00 |
Homo sapiens |
NKTWACGAYN |
NRTCGTWAMN |
SELEX
Yin et al.(2017)
HOXD12_eDBD_HT-SELEX
|
0.603
|
0.614
|
HOXD12
M05280_2.00 |
Homo sapiens |
NRTCGTAAAH |
DTTTACGAYN |
SELEX
Yin et al.(2017)
HOXD12_eDBD_Methyl-HT-SELEX
|
0.603
|
0.614
|
Hoxb6
M00381_2.00 |
Mus musculus |
NNDHNNN |
NNNDHNN |
PBM
Berger et al.(2008)
Hoxb6_3428
|
0.603
|
0.667
|
HOXB6
M04999_2.00 |
Homo sapiens |
NTAATKRY |
RYMATTAN |
SELEX
Yin et al.(2017)
HOXB6_eDBD_HT-SELEX
|
0.603
|
0.667
|
HOXB6
M05000_2.00 |
Homo sapiens |
HTAAYGAY |
RTCRTTAD |
SELEX
Yin et al.(2017)
HOXB6_eDBD_Methyl-HT-SELEX_1
|
0.603
|
0.667
|
HOXB6
M05001_2.00 |
Homo sapiens |
NTWATKRB |
VYMATWAN |
SELEX
Yin et al.(2017)
HOXB6_eDBD_Methyl-HT-SELEX_2
|
0.603
|
0.667
|
For this family, TFs with SR scores > 0.599 will likely have a similar motif |