CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Otx2
(
Mus musculus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSMUSG00000021848
T212423_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
This gene encodes a protein that belongs to the homeobox family of transcription factors. The encoded protein plays a role in the development and patterning of the head. This protein regulates development of the choroid plexuses in the brain affecting composition of cerebrospinal fluid in the developing brain and is thought to function in the development of sense organs in the embryo. In humans, mutations in this gene are associated with pituitary hormone deficiency. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Nov 2013]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Otx2
M00418_2.00
Mus musculus
NTAAKMBN
NVKMTTAN
PBM
Berger et al.(2008)
Otx2_3441
(Direct)
(Direct)
Otx2
M09183_2.00
Mus musculus
HTAATCCYNYNN
NNRNRGGATTAD
Misc
Kulakovskiy et al.(2013)
OTX2_MOUSE.H11MO.0.A
(Direct)
(Direct)
Otx2
M09569_2.00
Mus musculus
NHTAATCCHB
VDGGATTADN
Misc
Heinz et al.(2010)
EpiLC-Otx2_GSE56098
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Otx1
M00396_2.00
Mus musculus
NTAAKCYN
NRGMTTAN
PBM
Berger et al.(2008)
Otx1_2325
0.462
1.000
VSX1
M03087_2.00
Homo sapiens
YTAATTAN
NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.695
0.520
OTX2
M03197_2.00
Homo sapiens
NHTAAKCGGATTANN
NNTAATCCGMTTADN
SELEX
Jolma et al.(2013)
OTX2_1
0.696
1.000
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN
NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.695
0.520
OTX2
M03198_2.00
Homo sapiens
HTAATCCB
VGGATTAD
SELEX
Jolma et al.(2013)
OTX2_2
0.696
1.000
OTX1
M03116_2.00
Homo sapiens
NNTAAKCGGATTANN
NNTAATCCGMTTANN
SELEX
Jolma et al.(2013)
OTX1_1
0.462
1.000
VSX1
M04941_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.695
0.520
OTX2
M05251_2.00
Homo sapiens
NTAATCCN
NGGATTAN
SELEX
Yin et al.(2017)
OTX2_FL_HT-SELEX
0.696
1.000
OTX1
M03117_2.00
Homo sapiens
NTAATCSB
VSGATTAN
SELEX
Jolma et al.(2013)
OTX1_2
0.462
1.000
VSX1
M04944_2.00
Homo sapiens
NTAATTRS
SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.695
0.520
OTX2
M09153_2.00
Homo sapiens
BYTAATCCYYN
NRRGGATTARV
Misc
Kulakovskiy et al.(2013)
OTX2_HUMAN.H11MO.0.A
0.867
1.000
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN
NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.695
0.520
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN
NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.695
0.520
VSX1
M04943_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.695
0.520
Otx1
M03249_2.00
Mus musculus
NNTAAKCGGATTANN
NNTAATCCGMTTANN
SELEX
Jolma et al.(2013)
Otx1_1
0.462
1.000
VSX1
M04945_2.00
Homo sapiens
NTAATTRG
CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.695
0.520
OTX2
M10727_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OTX2_Q3_01
0.867
1.000
Otx1
M03250_2.00
Mus musculus
NTAATCCN
NGGATTAN
SELEX
Jolma et al.(2013)
Otx1_2
0.462
1.000
OTX2
M10728_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OTX2_Q3
0.696
1.000
oc
M03808_2.00
Drosophila melanogaster
HTAATCCB
VGGATTAD
SELEX
Nitta et al.(2015)
oc_1
0.462
1.000
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.695
0.520
OTX2
M05252_2.00
Homo sapiens
NTAATCCN
NGGATTAN
SELEX
Yin et al.(2017)
OTX2_FL_Methyl-HT-SELEX
0.696
1.000
OTX1
M05022_2.00
Homo sapiens
NTAATCCN
NGGATTAN
SELEX
Yin et al.(2017)
OTX1_eDBD_HT-SELEX
0.462
1.000
VAX1
M03168_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.681
0.440
OTX1
M05024_2.00
Homo sapiens
NTAATCCNNN
NNNGGATTAN
SELEX
Yin et al.(2017)
OTX1_FL_HT-SELEX
0.462
1.000
VAX1
M05182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.681
0.440
VAX1
M05183_2.00
Homo sapiens
BTMATKRN
NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.681
0.440
oc
M06502_2.00
Drosophila melanogaster
TAATCC
GGATTA
B1H
Mathelier et al.(2014)
MA0234.1
0.462
1.000
oc
M06282_2.00
Drosophila melanogaster
WTAATCC
GGATTAW
B1H
Zhu et al.(2011)
Oc_Cell_FBgn0004102
0.462
1.000
oc
M06283_2.00
Drosophila melanogaster
NTAATCCB
VGGATTAN
B1H
Zhu et al.(2011)
Oc_SOLEXA_FBgn0004102
0.462
1.000
OTX1
M10673_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OTX1_Q5
0.696
0.981
OTX1
M05023_2.00
Homo sapiens
NTAATCCN
NGGATTAN
SELEX
Yin et al.(2017)
OTX1_eDBD_Methyl-HT-SELEX
0.696
0.981
oc
M09681_2.00
Drosophila melanogaster
HTAATCCN
NGGATTAD
Misc
Kulakovskiy et al.(2009)
oc
0.462
1.000
OTX1
M05025_2.00
Homo sapiens
HTAATCCNHN
NDNGGATTAD
SELEX
Yin et al.(2017)
OTX1_FL_Methyl-HT-SELEX
0.696
0.981
CRX
M00275_2.00
Homo sapiens
NMTAATCCSN
NSGGATTAKN
PBM
Barrera et al.(2016)
CRX_V66I
0.690
0.885
CRX
M00274_2.00
Homo sapiens
NMTAATCCSN
NSGGATTAKN
PBM
Barrera et al.(2016)
CRX_REF
0.680
0.865
Crx
M00489_2.00
Mus musculus
NWAAKMBN
NVKMTTWN
PBM
Berger et al.(2008)
Crx_3485
0.680
0.865
CRX
M04949_2.00
Homo sapiens
NTAATCCN
NGGATTAN
SELEX
Yin et al.(2017)
CRX_FL_HT-SELEX
0.851
0.877
Crx
M08139_2.00
Mus musculus
YTAATCCYCYY
RRGRGGATTAR
ChIP-seq
Mathelier et al.(2014)
MA0467.1
0.851
0.877
CRX
M09132_2.00
Homo sapiens
BYTAATCCBHYYN
NRRDVGGATTARV
Misc
Kulakovskiy et al.(2013)
CRX_HUMAN.H11MO.0.B
0.851
0.877
Crx
M09208_2.00
Mus musculus
BYTAATCCBHYYN
NRRDVGGATTARV
Misc
Kulakovskiy et al.(2013)
CRX_MOUSE.H11MO.0.A
0.851
0.877
Crx
M09577_2.00
Mus musculus
NYTAATCC
GGATTARN
Misc
Heinz et al.(2010)
Retina-Crx_GSE20012
0.680
0.865
CRX
M10647_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CRX_Q4_01
0.680
0.865
CRX
M10648_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CRX_Q4_02
0.680
0.865
CRX
M04950_2.00
Homo sapiens
HTAATCCN
NGGATTAD
SELEX
Yin et al.(2017)
CRX_FL_Methyl-HT-SELEX
0.680
0.865
CRX
M00273_2.00
Homo sapiens
NNYTAATCCVN
NBGGATTARNN
PBM
Barrera et al.(2016)
CRX_R90W
0.840
0.860
CRX
M00270_2.00
Homo sapiens
NWDAKNN
NNMTHWN
PBM
Barrera et al.(2016)
CRX_E80A
0.830
0.860
ceh-37
M00674_2.00
Caenorhabditis elegans
HTAATCYN
NRGATTAD
PBM
Narasimhan et al.(2015)
pTH10716
0.661
0.673
CRX
M00271_2.00
Homo sapiens
NHDAKNN
NNMTHDN
PBM
Barrera et al.(2016)
CRX_R41Q
0.818
0.860
CRX
M00272_2.00
Homo sapiens
NNHNATNN
NNATNDNN
PBM
Barrera et al.(2016)
CRX_R41W
0.818
0.860
Dmbx1
M00441_2.00
Mus musculus
NTAATCYNN
NNRGATTAN
PBM
Berger et al.(2008)
Dmbx1_2277
0.631
0.654
DMBX1
M03236_2.00
Homo sapiens
NHTAATCCBN
NVGGATTADN
SELEX
Jolma et al.(2013)
DMBX1_1
0.631
0.654
DMBX1
M05383_2.00
Homo sapiens
NTAATCSN
NSGATTAN
SELEX
Yin et al.(2017)
DMBX1_eDBD_HT-SELEX
0.631
0.654
DMBX1
M05384_2.00
Homo sapiens
HTAATCCN
NGGATTAD
SELEX
Yin et al.(2017)
DMBX1_eDBD_Methyl-HT-SELEX
0.764
0.649
ceh-53
M00679_2.00
Caenorhabditis elegans
HTAATCYN
NRGATTAD
PBM
Narasimhan et al.(2015)
pTH10699
0.760
0.526
ceh-36
M00673_2.00
Caenorhabditis elegans
NWAATCYN
NRGATTWN
PBM
Narasimhan et al.(2015)
pTH10730
0.759
0.649
HBX4_ECHGR
M02195_2.00
Echinococcus granulosus
NHTAATCYNN
NNRGATTADN
PBM
Weirauch et al.(2014)
pTH6301
0.750
0.561
NEMVEDRAFT_v1g113057
M02144_2.00
Nematostella vectensis
NYTAATCCBN
NVGGATTARN
PBM
Weirauch et al.(2014)
pTH6135
0.618
0.538
Gsc
M02120_2.00
Drosophila melanogaster
NTAATCYN
NRGATTAN
PBM
Weirauch et al.(2014)
pTH5511
0.608
0.635
Gsc
M03817_2.00
Drosophila melanogaster
TAATCCB
VGGATTA
SELEX
Nitta et al.(2015)
Gsc_1
0.608
0.635
Gsc
M03818_2.00
Drosophila melanogaster
TAATCGGATTA
TAATCCGATTA
SELEX
Nitta et al.(2015)
Gsc_2
0.608
0.635
Gsc
M03819_2.00
Drosophila melanogaster
TAATCYNHTAATCBN
NVGATTADNRGATTA
SELEX
Nitta et al.(2015)
Gsc_3
0.741
0.632
Gsc
M03820_2.00
Drosophila melanogaster
TAATCGGATTA
TAATCCGATTA
SELEX
Nitta et al.(2015)
Gsc_4
0.741
0.632
Gsc
M03821_2.00
Drosophila melanogaster
TAATCYNWTWATCYB
VRGATWAWNRGATTA
SELEX
Nitta et al.(2015)
Gsc_5
0.741
0.632
Gsc
M05873_2.00
Drosophila melanogaster
TAATCSNHTWA
TWADNSGATTA
SMiLE-seq
Isakova et al.(2017)
Gsc
0.741
0.632
Gsc
M06509_2.00
Drosophila melanogaster
TAATCY
RGATTA
B1H
Mathelier et al.(2014)
MA0190.1
0.608
0.635
Gsc
M06297_2.00
Drosophila melanogaster
VNTAATCY
RGATTANB
B1H
Zhu et al.(2011)
Gsc_Cell_FBgn0010323
0.608
0.635
Gsc
M06298_2.00
Drosophila melanogaster
NTAATCY
RGATTAN
B1H
Zhu et al.(2011)
Gsc_SOLEXA_FBgn0010323
0.608
0.635
Gsc
M00411_2.00
Mus musculus
NNTAATYBN
NVRATTANN
PBM
Berger et al.(2008)
Gsc_2327
0.604
0.577
GSC
M03146_2.00
Homo sapiens
NHTAATCCNH
DNGGATTADN
SELEX
Jolma et al.(2013)
GSC_1
0.736
0.579
GSC
M05134_2.00
Homo sapiens
NTAATCCB
VGGATTAN
SELEX
Yin et al.(2017)
GSC_eDBD_HT-SELEX
0.736
0.579
GSC
M05136_2.00
Homo sapiens
HTAATCCN
NGGATTAD
SELEX
Yin et al.(2017)
GSC_FL_HT-SELEX
0.736
0.579
GSC
M05135_2.00
Homo sapiens
HTAATCCB
VGGATTAD
SELEX
Yin et al.(2017)
GSC_eDBD_Methyl-HT-SELEX
0.736
0.579
GSC
M05137_2.00
Homo sapiens
HTAATCCN
NGGATTAD
SELEX
Yin et al.(2017)
GSC_FL_Methyl-HT-SELEX
0.604
0.577
CBG01820
M01241_2.00
Caenorhabditis briggsae
NTAATCCN
NGGATTAN
PBM
Lambert et al.(2019)
pTH11454
0.604
0.615
Pitx1
M00415_2.00
Mus musculus
NTAATCYNN
NNRGATTAN
PBM
Berger et al.(2008)
Pitx1_2312
0.731
0.632
PITX1
M03082_2.00
Homo sapiens
NHTAATCCN
NGGATTADN
SELEX
Jolma et al.(2013)
PITX1_1
0.731
0.632
PITX1
M03083_2.00
Homo sapiens
NHTAATCCN
NGGATTADN
SELEX
Jolma et al.(2013)
PITX1_2
0.731
0.632
PITX1
M03084_2.00
Homo sapiens
HTAATCCN
NGGATTAD
SELEX
Jolma et al.(2013)
PITX1_3
0.731
0.632
PITX1
M04928_2.00
Homo sapiens
NTAATCCN
NGGATTAN
SELEX
Yin et al.(2017)
PITX1_eDBD_HT-SELEX
0.731
0.632
PITX1
M04930_2.00
Homo sapiens
NTAATCCN
NGGATTAN
SELEX
Yin et al.(2017)
PITX1_FL_HT-SELEX
0.731
0.632
Pitx1
M09182_2.00
Mus musculus
NYWAAKCCYH
DRGGMTTWRN
Misc
Kulakovskiy et al.(2013)
PITX1_MOUSE.H11MO.0.C
0.731
0.632
PITX1
M10640_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX1_Q4
0.731
0.632
PITX1
M10641_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX1_Q6
0.731
0.632
PITX1
M04929_2.00
Homo sapiens
NTAAKCCN
NGGMTTAN
SELEX
Yin et al.(2017)
PITX1_eDBD_Methyl-HT-SELEX
0.731
0.632
PITX1
M04931_2.00
Homo sapiens
HTAATCCN
NGGATTAD
SELEX
Yin et al.(2017)
PITX1_FL_Methyl-HT-SELEX
0.731
0.632
PITX2
M00313_2.00
Homo sapiens
NWAAKHYN
NRDMTTWN
PBM
Barrera et al.(2016)
PITX2_REF
0.731
0.614
Pitx3
M00428_2.00
Mus musculus
NTAAKCYN
NRGMTTAN
PBM
Berger et al.(2008)
Pitx3_3497
0.731
0.614
Pitx2
M00440_2.00
Mus musculus
NTAATCCN
NGGATTAN
PBM
Berger et al.(2008)
Pitx2_2274
0.731
0.614
PITX3
M03111_2.00
Homo sapiens
NHTAATCCN
NGGATTADN
SELEX
Jolma et al.(2013)
PITX3_1
0.731
0.614
PITX2
M05229_2.00
Homo sapiens
NTAAKCCN
NGGMTTAN
SELEX
Yin et al.(2017)
PITX2_eDBD_HT-SELEX
0.731
0.614
PITX2
M05231_2.00
Homo sapiens
NTAATCCN
NGGATTAN
SELEX
Yin et al.(2017)
PITX2_FL_HT-SELEX
0.731
0.614
PITX3
M04997_2.00
Homo sapiens
NTAATCCN
NGGATTAN
SELEX
Yin et al.(2017)
PITX3_eDBD_HT-SELEX
0.731
0.614
PITX2
M10720_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX2_Q2
0.731
0.614
PITX2
M10721_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX2_Q4
0.731
0.614
PITX2
M10722_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX2_Q6
0.731
0.614
PITX3
M10660_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX3_Q2
0.731
0.614
PITX3
M10661_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX3_Q3_01
0.731
0.614
PITX3
M10662_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX3_Q3
0.731
0.614
PITX2
M00312_2.00
Homo sapiens
NNNTATWAATTNN
NNAATTWATANNN
PBM
Barrera et al.(2016)
PITX2_R130W
0.731
0.614
PITX2
M00314_2.00
Homo sapiens
NTAATMYN
NRKATTAN
PBM
Barrera et al.(2016)
PITX2_T114P
0.731
0.614
PITX2
M05230_2.00
Homo sapiens
HTAATCCN
NGGATTAD
SELEX
Yin et al.(2017)
PITX2_eDBD_Methyl-HT-SELEX
0.731
0.614
PITX2
M05232_2.00
Homo sapiens
YTAATCCY
RGGATTAR
SELEX
Yin et al.(2017)
PITX2_FL_Methyl-HT-SELEX
0.731
0.614
PITX3
M04998_2.00
Homo sapiens
NTAATCCN
NGGATTAN
SELEX
Yin et al.(2017)
PITX3_eDBD_Methyl-HT-SELEX
0.731
0.614
Ptx1
M02123_2.00
Drosophila melanogaster
NTAATCYNN
NNRGATTAN
PBM
Weirauch et al.(2014)
pTH5644
0.731
0.596
Ptx1
M00562_2.00
Drosophila melanogaster
NYTAATCCBN
NVGGATTARN
PBM
Busser et al.(2012a)
Ptx1
0.731
0.596
Ptx1
M03842_2.00
Drosophila melanogaster
NTAATCCN
NGGATTAN
SELEX
Nitta et al.(2015)
Ptx1_1
0.731
0.596
Ptx1
M03843_2.00
Drosophila melanogaster
NTAATCCN
NGGATTAN
SELEX
Nitta et al.(2015)
Ptx1_2
0.731
0.596
Ptx1
M03844_2.00
Drosophila melanogaster
NCGHTAATCCN
NGGATTADCGN
SELEX
Nitta et al.(2015)
Ptx1_3
0.731
0.596
Ptx1
M06521_2.00
Drosophila melanogaster
YTAATCC
GGATTAR
B1H
Mathelier et al.(2014)
MA0201.1
0.731
0.596
Ptx1
M06319_2.00
Drosophila melanogaster
YTAATCC
GGATTAR
B1H
Zhu et al.(2011)
Ptx1_Cell_FBgn0020912
0.731
0.596
Ptx1
M06320_2.00
Drosophila melanogaster
NYTAATCC
GGATTARN
B1H
Zhu et al.(2011)
Ptx1_SOLEXA_FBgn0020912
0.731
0.596
PITX2
M00310_2.00
Homo sapiens
HTAATCYN
NRGATTAD
PBM
Barrera et al.(2016)
PITX2_L100Q
0.731
0.596
GSC2
M03080_2.00
Homo sapiens
NHTAATCCBH
DVGGATTADN
SELEX
Jolma et al.(2013)
GSC2_1
0.731
0.579
GSC2
M04920_2.00
Homo sapiens
NTAATNNN
NNNATTAN
SELEX
Yin et al.(2017)
GSC2_eDBD_HT-SELEX
0.731
0.579
GSC2
M04921_2.00
Homo sapiens
NTAATCYN
NRGATTAN
SELEX
Yin et al.(2017)
GSC2_eDBD_Methyl-HT-SELEX
0.731
0.579
PITX2
M00311_2.00
Homo sapiens
TTAATCCY
RGGATTAA
PBM
Barrera et al.(2016)
PITX2_R108H
0.726
0.596
gsc
M09584_2.00
Xenopus tropicalis
NTAATCYN
NRGATTAN
Misc
Heinz et al.(2010)
FrogEmbryos-GSC_DRA000576
0.724
0.561
DPRX
M03237_2.00
Homo sapiens
NHTAATCYNN
NNRGATTADN
SELEX
Jolma et al.(2013)
DPRX_1
0.685
0.439
DPRX
M03238_2.00
Homo sapiens
NRGMTAATCYN
NRGATTAKCYN
SELEX
Jolma et al.(2013)
DPRX_2
0.685
0.439
DPRX
M05388_2.00
Homo sapiens
VGMTAATCYN
NRGATTAKCB
SELEX
Yin et al.(2017)
DPRX_eDBD_HT-SELEX
0.685
0.439
DPRX
M05389_2.00
Homo sapiens
AGATMATCYN
NRGATKATCT
SELEX
Yin et al.(2017)
DPRX_eDBD_Methyl-HT-SELEX
0.685
0.439
dve
M02122_2.00
Drosophila melanogaster
NTAATCCV
BGGATTAN
PBM
Weirauch et al.(2014)
pTH6218
0.632
0.351
AGAP006642
M02035_2.00
Anopheles gambiae
NHTAATCY
RGATTADN
PBM
Weirauch et al.(2014)
pTH6201
0.631
0.333
Obox6
M00490_2.00
Mus musculus
NTAATCYNN
NNRGATTAN
PBM
Berger et al.(2008)
Obox6_3440
0.616
0.368
For this family, TFs with SR scores >
0.599
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00418_2.00
Homeodomain
17
73
RRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQ
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000112532
Homeodomain
47
103
RRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQ
ENSMUSP00000113690
Homeodomain
39
95
RRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQ
ENSMUSP00000113930
Homeodomain
39
95
RRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQ
ENSMUSP00000116630
Homeodomain
47
98
RRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRR
ENSMUSP00000122200
Homeodomain
39
63
RRERTTFTRAQLDVLEALFAKTRYP
ENSMUSP00000123046
Homeodomain
1
29
MREEVALKINLPESRVQVWFKNRRAKCRQ
ENSMUSP00000123454
Homeodomain
39
95
RRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQ
Links
Other
Homeodomain
family TFs
Other
Mus musculus
TFs
2410 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy