Rhox11 (Mus musculus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSMUSG00000051038 T212535_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in enteric nervous system development; positive regulation of gene expression; and regulation of transcription by RNA polymerase II. Predicted to be located in cytosol and nucleoplasm. Orthologous to human RHOXF1 (Rhox homeobox family member 1). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Rhox11
M00510_2.00		 Mus musculus
DNWACABNN
NNVTGTWNH		 PBM
Berger et al.(2008)
Rhox11_1765		 (Direct) (Direct)
Rhox11
M00511_2.00		 Mus musculus
NNWAYABN
NVTRTWNN		 PBM
Berger et al.(2008)
Rhox11_2205		 (Direct) (Direct)
Rhox11
M02100_2.00		 Mus musculus
NNNWAYABNN
NNVTRTWNNN		 PBM
Weirauch et al.(2014)
pTH5746		 (Direct) (Direct)
Rhox11
M03285_2.00		 Mus musculus
DDWACABYD
HRVTGTWHH		 SELEX
Jolma et al.(2013)
Rhox11_1		 (Direct) (Direct)
Rhox11
M10769_2.00		 Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RHOX11_02		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00510_2.00 Homeodomain 17 73
M00511_2.00 Homeodomain 19 75
M02100_2.00 Homeodomain 1 56

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000052929 Homeodomain 91 147

Links

Other Homeodomain family TFs
Other Mus musculus TFs

Invalid Input OrderBy

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action