CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Homez
(
Mus musculus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSMUSG00000057156
T212548_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Homez
M00518_2.00
Mus musculus
NNHHNNDDNN
NNHHNNDDNN
PBM
Berger et al.(2008)
Homez_1063
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HOMEZ
M03242_2.00
Homo sapiens
WWWAATCGTTTW
WAAACGATTWWW
SELEX
Jolma et al.(2013)
HOMEZ_1
0.854
0.920
For this family, TFs with SR scores >
0.599
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00518_2.00
Homeodomain
16
72
QRKTKRKTKEQLAILKSFFLQCQWARREDYHKLEQITGLPRPEIIQWFGDTRYALKH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000079929
Homeodomain
41
86
DGNEHLLQAFSYFPYPSLADIALLCLRHGLQMEKVKTWFMAQRLRC
ENSMUSP00000079929
Homeodomain
327
383
QRKTKRKTKEQLAILKSFFLQCQWARREDYHKLEQITGLPRPEIIQWFGDTRYALKH
ENSMUSP00000079929
Homeodomain
425
471
PPPPPDIRPLEKYWAAHQQLQEADILKLSQASRLSTQQVLDWFDSRL
ENSMUSP00000114619
Homeodomain
39
86
ELDGNEHLLQAFSYFPYPSLADIALLCLRHGLQMEKVKTWFMAQRLRC
ENSMUSP00000117828
Homeodomain
327
383
QRKTKRKTKEQLAILKSFFLQCQWARREDYHKLEQITGLPRPEIIQWFGDTRYALKH
ENSMUSP00000135648
Homeodomain
1
32
RREDYHKLEQITGLPRPEIIQWFGDTRYALKH
ENSMUSP00000135648
Homeodomain
74
120
PPPPPDIRPLEKYWAAHQQLQEADILKLSQASRLSTQQVLDWFDSRL
Links
Other
Homeodomain
family TFs
Other
Mus musculus
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy