PBX2 (Oryctolagus cuniculus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSOCUG00000016439 T213193_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PBX2
M08134_2.00
Homo sapiens
NWGAKTGACABN

NVTGTCAMTCWN
ChIP-seq
Mathelier et al.(2014)
MA1113.1
0.867 1.000
PBX2
M09165_2.00
Homo sapiens
KRVHKTGATTGAWKN

NMWTCAATCAMDBYM
Misc
Kulakovskiy et al.(2013)
PBX2_HUMAN.H11MO.0.C
0.867 1.000
Pbx2
M09199_2.00
Mus musculus
KRVHKTGATTGAWKN

NMWTCAATCAMDBYM
Misc
Kulakovskiy et al.(2013)
PBX2_MOUSE.H11MO.0.C
0.867 1.000
pbx4
M02110_2.00
Tetraodon nigroviridis
TTGAYGDV

BHCRTCAA
PBM
Weirauch et al.(2014)
pTH6425
0.867 0.982
Pbx1
M00513_2.00
Mus musculus
NNDKANNNN

NNNNTMHNN
PBM
Berger et al.(2008)
Pbx1_3203
0.867 0.965
PBX1
M05362_2.00
Homo sapiens
NTGATKGAYR

YRTCMATCAN
SELEX
Yin et al.(2017)
PBX1_eDBD_HT-SELEX
0.867 0.965
PBX1
M05364_2.00
Homo sapiens
DTGMTKGRYN

NRYCMAKCAH
SELEX
Yin et al.(2017)
PBX1_FL_HT-SELEX
0.867 0.965
PBX1
M02685_2.00
Homo sapiens
WWTGATTGATND

HNATCAATCAWW
SELEX
Mathelier et al.(2014)
MA0070.1
0.867 0.965
PBX1
M09164_2.00
Homo sapiens
DGABTGRCRG

CYGYCAVTCH
Misc
Kulakovskiy et al.(2013)
PBX1_HUMAN.H11MO.0.A
0.867 0.965
PBX1
M09561_2.00
Homo sapiens
TGABTGACAGSC

GSCTGTCAVTCA
Misc
Heinz et al.(2010)
MCF7-PBX1_GSE28007
0.867 0.965
PBX1
M10748_2.00
Homo sapiens
WTKATTRDT

AHYAATMAW
Transfac
Matys et al.(2006)
V$PBX1_01
0.867 0.965
PBX1
M10749_2.00
Homo sapiens
DNHTTGATTGATKDB

VHMATCAATCAADNH
Transfac
Matys et al.(2006)
V$PBX1_02
0.867 0.965
PBX1
M10750_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX1_03
0.867 0.965
PBX1
M10751_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX1_05
0.867 0.965
PBX1
M10752_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX1_10
0.867 0.965
PBX1
M10753_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX1_Q3
0.867 0.965
PBX1
M05363_2.00
Homo sapiens
DTGAKKGAYG

CRTCMMTCAH
SELEX
Yin et al.(2017)
PBX1_eDBD_Methyl-HT-SELEX
0.867 0.965
PBX1
M05365_2.00
Homo sapiens
MRTCAATCMH

DKGATTGAYK
SELEX
Yin et al.(2017)
PBX1_FL_Methyl-HT-SELEX
0.867 0.965
Pbx3
M09205_2.00
Mus musculus
BBBTGATTGRYNDN

NHNRYCAATCAVVV
Misc
Kulakovskiy et al.(2013)
PBX3_MOUSE.H11MO.0.A
0.865 0.965
exd
M06487_2.00
Drosophila melanogaster
YRTCAAAN

NTTTGAYR
B1H
Mathelier et al.(2014)
MA0222.1
0.822 0.947
exd
M06243_2.00
Drosophila melanogaster
YRTCAAAN

NTTTGAYR
B1H
Zhu et al.(2011)
Exd_Cell_FBgn0000611
0.822 0.947
exd
M06244_2.00
Drosophila melanogaster
NWRNWYNAAA

TTTNRWNYWN
B1H
Zhu et al.(2011)
exd_FlyReg_FBgn0000611
0.822 0.947
exd
M06245_2.00
Drosophila melanogaster
NDTGAYRW

WYRTCAHN
B1H
Zhu et al.(2011)
exd_SOLEXA_2_FBgn0000611
0.822 0.947
exd
M06246_2.00
Drosophila melanogaster
NNDTGAYR

YRTCAHNN
B1H
Zhu et al.(2011)
Exd_SOLEXA_FBgn0000611
0.822 0.947
PBX4
M00277_2.00
Homo sapiens
NNDDWHDNNN

NNNHDWHHNN
PBM
Barrera et al.(2016)
PBX4_REF
0.815 0.912
PBX4
M10649_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX4_01
0.815 0.912
CBG10835
M01243_2.00
Caenorhabditis briggsae
NNTKAYDNN

NNHRTMANN
PBM
Lambert et al.(2019)
pTH11444
0.691 0.579
PBX4
M00276_2.00
Homo sapiens
NYTAATTADNN

NNHTAATTARN
PBM
Barrera et al.(2016)
PBX4_R215Q
0.677 0.895
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000006981 Homeodomain 243 302
ENSOCUP00000014129 Homeodomain 245 304

Links

Other Homeodomain family TFs
Other Oryctolagus cuniculus TFs

436 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000013420 Ailuropoda melanoleuca ENSAMEG00000013420 I 0.000
ENSCSAG00000012641 Chlorocebus sabaeus ENSCSAG00000012641 I 0.000
ENSDNOG00000007738 Dasypus novemcinctus ENSDNOG00000007738 I 0.000
ENSGGOG00000023539 Gorilla gorilla ENSGGOG00000023539 I 0.000
ENSMPUG00000017875 Mustela putorius furo ENSMPUG00000017875 I 0.000
ENSNLEG00000009781 Nomascus leucogenys ENSNLEG00000009781 I 0.000
ENSOARG00000003219 Ovis aries ENSOARG00000003219 I 0.000
ENSP00000246229 Macaca fascicularis ENSP00000246229 I 0.000
ENSP00000246229-D1 Bos grunniens ENSP00000246229-D1 I 0.000
ENSPANG00000015152 Papio anubis ENSPANG00000015152 I 0.000
ENSPPYG00000010903 Pongo abelii ENSPPYG00000010903 I 0.000
ENSSSCG00000026589 Sus scrofa ENSSSCG00000026589 I 0.000
ENSSTOG00000025408 Ictidomys tridecemlineatus ENSSTOG00000025408 I 0.000
Myotis_brandtii_PLAGL2_10023751 Myotis brandtii Myotis_brandtii_PLAGL2_10023751 I 0.000
PLAGL2 Macaca mulatta ENSMMUG00000000118 I 0.000
PLAGL2 Bos taurus ENSBTAG00000018334 I 0.000
PLAGL2 Canis familiaris ENSCAFG00000031042 I 0.000
PLAGL2 Tursiops truncatus ENSTTRG00000007954 I 0.000
PLAGL2 Callithrix jacchus ENSCJAG00000020737 I 0.000
PLAGL2 Cavia porcellus ENSCPOG00000020173 I 0.000
PLAGL2 Sus scrofa ENSSSCG00000007243 I 0.000
Plagl2 Rattus norvegicus ENSRNOG00000010086 I 0.000
PLAGL2 Pan troglodytes ENSPTRG00000013374 I 0.000
PLAGL2 Equus caballus ENSECAG00000008341 I 0.000
PLAGL2 Erinaceus europaeus ENSEEUG00000005298 I 0.000
PLAGL2 Otolemur garnettii ENSOGAG00000005506 I 0.000
PLAGL2 Oryctolagus cuniculus ENSOCUG00000004370 I 0.000
PLAGL2 Felis catus ENSFCAG00000028051 I 0.000
PLAGL2 Loxodonta africana ENSLAFG00000003132 I 0.000
PLAGL2 Microcebus murinus ENSMICG00000015948 I 0.000
PLAGL2 Myotis lucifugus ENSMLUG00000008406 I 0.000
Plagl2 Mus musculus ENSMUSG00000051413 D 0.000