ENSONIG00000010351 (Oreochromis niloticus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSONIG00000010351 T213573_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Cdx1
M00427_2.00
Mus musculus
NWWATDRNN

NNYHATWWN
PBM
Berger et al.(2008)
Cdx1_2245
0.640 0.474
CDX1
M03115_2.00
Homo sapiens
NTTTATKRB

VYMATAAAN
SELEX
Jolma et al.(2013)
CDX1_1
0.640 0.474
CDX1
M05018_2.00
Homo sapiens
VKTTTATKRCN

NGYMATAAAMB
SELEX
Yin et al.(2017)
CDX1_eDBD_HT-SELEX
0.640 0.474
CDX1
M09140_2.00
Homo sapiens
HCWTAAAD

HTTTAWGD
Misc
Kulakovskiy et al.(2013)
CDX1_HUMAN.H11MO.0.C
0.640 0.474
Cdx1
M09186_2.00
Mus musculus
HCWTAAAD

HTTTAWGD
Misc
Kulakovskiy et al.(2013)
CDX1_MOUSE.H11MO.0.C
0.640 0.474
CDX1
M10670_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDX1_Q4
0.640 0.474
CDX1
M10671_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDX1_Q5
0.640 0.474
CDX1
M10761_2.00
Gallus gallus
BDBWAAK

MTTWVHV
Transfac
Matys et al.(2006)
V$CDXA_01
0.640 0.474
CDX1
M10762_2.00
Gallus gallus
WWWWMYR

YRKWAWW
Transfac
Matys et al.(2006)
V$CDXA_02
0.640 0.474
CDX1
M05019_2.00
Homo sapiens
NGTCGTAAAWB

VWTTTACGACN
SELEX
Yin et al.(2017)
CDX1_eDBD_Methyl-HT-SELEX
0.640 0.474
Cdx2
M00447_2.00
Mus musculus
NWWAYDRNN

NNYHRTWWN
PBM
Berger et al.(2008)
Cdx2_4272
0.640 0.456
Q70LF3_ARTSF
M02211_2.00
Artemia franciscana
BTAATTAB

VTAATTAV
PBM
Weirauch et al.(2014)
pTH5553
0.640 0.456
CDX2
M03196_2.00
Homo sapiens
KTTTATKRB

VYMATAAAM
SELEX
Jolma et al.(2013)
CDX2_1
0.640 0.456
CDX4
M05129_2.00
Homo sapiens
VKTTTATKRCH

DGYMATAAAMB
SELEX
Yin et al.(2017)
CDX4_FL_HT-SELEX
0.640 0.456
CDX2
M05248_2.00
Homo sapiens
NDTWAYRRYN

NRYYRTWAHN
SELEX
Yin et al.(2017)
CDX2_eDBD_HT-SELEX_1
0.640 0.456
CDX2
M05249_2.00
Homo sapiens
NDWWATKRB

VYMATWWHN
SELEX
Yin et al.(2017)
CDX2_eDBD_HT-SELEX_2
0.640 0.456
CDX2
M08131_2.00
Homo sapiens
YTTTATKRCHB

VDGYMATAAAR
ChIP-seq
Mathelier et al.(2014)
MA0465.1
0.640 0.456
CDX2
M09152_2.00
Homo sapiens
DTTBATKGCHNB

VNDGCMATVAAH
Misc
Kulakovskiy et al.(2013)
CDX2_HUMAN.H11MO.0.A
0.640 0.456
Cdx2
M09193_2.00
Mus musculus
BTTTATKRCYBY

RVRGYMATAAAV
Misc
Kulakovskiy et al.(2013)
CDX2_MOUSE.H11MO.0.A
0.640 0.456
Cdx4
M09197_2.00
Mus musculus
WGATTTATDRBH

DVYHATAAATCW
Misc
Kulakovskiy et al.(2013)
CDX4_MOUSE.H11MO.0.A
0.640 0.456
Cdx2
M09572_2.00
Mus musculus
NTTTTATKRC

GYMATAAAAN
Misc
Heinz et al.(2010)
mES-Cdx2_GSE14586
0.640 0.456
CDX2
M10723_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDX2_Q5_01
0.640 0.456
CDX2
M10724_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDX2_Q5_02
0.640 0.456
CDX2
M10725_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDX2_Q5
0.640 0.456
CDX2
M10726_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CDX2_Q6
0.640 0.456
CDX2
M05250_2.00
Homo sapiens
NRTCGTAWHBNN

NNVDWTACGAYN
SELEX
Yin et al.(2017)
CDX2_eDBD_Methyl-HT-SELEX
0.640 0.456
CDX4
M05130_2.00
Homo sapiens
BGTCGTAAAHN

NDTTTACGACV
SELEX
Yin et al.(2017)
CDX4_FL_Methyl-HT-SELEX_1
0.640 0.456
CDX4
M05131_2.00
Homo sapiens
VKTTTATKGCN

NGCMATAAAMB
SELEX
Yin et al.(2017)
CDX4_FL_Methyl-HT-SELEX_2
0.640 0.456
cad
M03780_2.00
Drosophila melanogaster
NKTTTATKRCHB

VDGYMATAAAMN
SELEX
Nitta et al.(2015)
cad_1
0.632 0.456
cad
M03781_2.00
Drosophila melanogaster
NDTTTATKRCHN

NDGYMATAAAHN
SELEX
Nitta et al.(2015)
cad_2
0.632 0.456
cad
M03782_2.00
Drosophila melanogaster
NDTTTATKRCNB

VNGYMATAAAHN
SELEX
Nitta et al.(2015)
cad_3
0.632 0.456
cad
M03783_2.00
Drosophila melanogaster
NNTTTAYGRYNN

NNRYCRTAAANN
SELEX
Nitta et al.(2015)
cad_4
0.632 0.456
cad
M06223_2.00
Drosophila melanogaster
HTTWATTR

YAATWAAD
B1H
Zhu et al.(2011)
Cad_Cell_FBgn0000251
0.632 0.456
cad
M06224_2.00
Drosophila melanogaster
RBYVDAAMV

BKTTHBRVY
B1H
Zhu et al.(2011)
cad_FlyReg_FBgn0000251
0.632 0.456
cad
M06225_2.00
Drosophila melanogaster
NTTWATKR

YMATWAAN
B1H
Zhu et al.(2011)
Cad_SOLEXA_FBgn0000251
0.632 0.456
cad
M08420_2.00
Drosophila melanogaster
DTTTTATKRYY

RRYMATAAAAH
ChIP-chip
Mathelier et al.(2014)
MA0216.2
0.632 0.456
cad
M09580_2.00
Drosophila melanogaster
DTTTAYGRYN

NRYCRTAAAH
Misc
Heinz et al.(2010)
Drosophila-Embryos_modEncode
0.632 0.456
cad
M09674_2.00
Drosophila melanogaster
HTTTATKRBY

RVYMATAAAD
Misc
Kulakovskiy et al.(2009)
cad
0.632 0.456
cad
M10783_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$CAD_Q6
0.632 0.456
VSX1
M00268_2.00
Homo sapiens
NNWRAYNNN

NNNRTYWNN
PBM
Barrera et al.(2016)
VSX1_R166Q
0.614 0.614
ISX
M00319_2.00
Homo sapiens
DTAATTRK

MYAATTAH
PBM
Barrera et al.(2016)
ISX_REF
0.614 0.649
ISX
M03218_2.00
Homo sapiens
NTAATTARATTAN

NTAATYTAATTAN
SELEX
Jolma et al.(2013)
ISX_1
0.614 0.649
ISX
M03219_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Jolma et al.(2013)
ISX_2
0.614 0.649
ISX
M03220_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
ISX_3
0.614 0.649
ISX
M05304_2.00
Homo sapiens
BTAATTRG

CYAATTAV
SELEX
Yin et al.(2017)
ISX_eDBD_HT-SELEX
0.614 0.649
ISX
M05307_2.00
Homo sapiens
YTAATTRS

SYAATTAR
SELEX
Yin et al.(2017)
ISX_FL_HT-SELEX
0.614 0.649
ISX
M05305_2.00
Homo sapiens
NTAATTAG

CTAATTAN
SELEX
Yin et al.(2017)
ISX_eDBD_Methyl-HT-SELEX_1
0.614 0.649
ISX
M05306_2.00
Homo sapiens
HTAAYGHN

NDCRTTAD
SELEX
Yin et al.(2017)
ISX_eDBD_Methyl-HT-SELEX_2
0.614 0.649
ISX
M05308_2.00
Homo sapiens
YTAATTRS

SYAATTAR
SELEX
Yin et al.(2017)
ISX_FL_Methyl-HT-SELEX_1
0.614 0.649
ISX
M05309_2.00
Homo sapiens
HTAAYGHN

NDCRTTAD
SELEX
Yin et al.(2017)
ISX_FL_Methyl-HT-SELEX_2
0.614 0.649
ARX
M00264_2.00
Homo sapiens
NNWRATNNN

NNNATYWNN
PBM
Barrera et al.(2016)
ARX_REF
0.613 0.684
Arx
M00467_2.00
Mus musculus
NTAATTDN

NHAATTAN
PBM
Berger et al.(2008)
Arx_1738
0.613 0.684
ARX
M03076_2.00
Homo sapiens
NTAATYNRATTAN

NTAATYNRATTAN
SELEX
Jolma et al.(2013)
ARX_1
0.613 0.684
Arx
M03269_2.00
Mus musculus
NTAATYNRATTAN

NTAATYNRATTAN
SELEX
Jolma et al.(2013)
Arx_1
0.613 0.684
ARX
M04895_2.00
Homo sapiens
BTAATTRR

YYAATTAV
SELEX
Yin et al.(2017)
ARX_eDBD_HT-SELEX
0.613 0.684
Arx
M10775_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ARX_05
0.613 0.684
ARX
M00265_2.00
Homo sapiens
DTAATTRK

MYAATTAH
PBM
Barrera et al.(2016)
ARX_T333N
0.613 0.684
ARX
M04896_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
ARX_eDBD_Methyl-HT-SELEX
0.613 0.684
ARX
M00260_2.00
Homo sapiens
NMTAATTANNN

NNNTAATTAKN
PBM
Barrera et al.(2016)
ARX_L343Q
0.613 0.667
ARX
M00261_2.00
Homo sapiens
NNWRAYNNN

NNNRTYWNN
PBM
Barrera et al.(2016)
ARX_P353L
0.613 0.667
ARX
M00262_2.00
Homo sapiens
ATAATTAT

ATAATTAT
PBM
Barrera et al.(2016)
ARX_P353R
0.613 0.667
Nkx2-6
M00496_2.00
Mus musculus
HYAAGTRBNN

NNVYACTTRD
PBM
Berger et al.(2008)
Nkx2-6_3437
0.612 0.474
NKX2-5
M00323_2.00
Homo sapiens
NWYAAGTGSNN

NNSCACTTRWN
PBM
Barrera et al.(2016)
NKX2-5_REF
0.610 0.509
Nkx2-5
M00404_2.00
Mus musculus
NNNRAGDRBN

NVYHCTYNNN
PBM
Berger et al.(2008)
Nkx2-5_3436
0.610 0.509
NKX2-5
M05346_2.00
Homo sapiens
BHYAAGTGBN

NVCACTTRDV
SELEX
Yin et al.(2017)
NKX2-5_FL_HT-SELEX
0.610 0.509
Nkx2-5
M02686_2.00
Mus musculus
WTAAKWK

MWMTTAW
SELEX
Mathelier et al.(2014)
MA0063.1
0.610 0.509
Nkx2-5
M08136_2.00
Mus musculus
SYTGAGWGSYH

DRSCWCTCARS
ChIP-seq
Mathelier et al.(2014)
MA0503.1
0.610 0.509
NKX2-5
M09163_2.00
Homo sapiens
BKRAGWGV

BCWCTYMV
Misc
Kulakovskiy et al.(2013)
NKX25_HUMAN.H11MO.0.B
0.610 0.509
Nkx2-5
M09177_2.00
Mus musculus
NBYBRAGTGS

SCACTYVRVN
Misc
Kulakovskiy et al.(2013)
NKX25_MOUSE.H11MO.0.A
0.610 0.509
Nkx2-5
M09567_2.00
Mus musculus
HBRAGWGBNN

NNVCWCTYVD
Misc
Heinz et al.(2010)
HL1-Nkx2.5.biotin_GSE21529
0.610 0.509
NKX2-5
M10742_2.00
Homo sapiens
TYAAGTG

CACTTRA
Transfac
Matys et al.(2006)
V$NKX25_01
0.610 0.509
NKX2-5
M10743_2.00
Homo sapiens
CWTAATTV

BAATTAWG
Transfac
Matys et al.(2006)
V$NKX25_02
0.610 0.509
NKX2-5
M10744_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX25_Q5
0.610 0.509
NKX2-5
M10745_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX25_Q6
0.610 0.509
NKX2-5
M00320_2.00
Homo sapiens
NHBAAKWRN

NYWMTTVDN
PBM
Barrera et al.(2016)
NKX2-5_K183E
0.610 0.509
NKX2-5
M00321_2.00
Homo sapiens
HNAAGTRBNN

NNVYACTTND
PBM
Barrera et al.(2016)
NKX2-5_R161P
0.610 0.509
NKX2-5
M05347_2.00
Homo sapiens
BTYAAGTGGN

NCCACTTRAV
SELEX
Yin et al.(2017)
NKX2-5_FL_Methyl-HT-SELEX_1
0.610 0.509
NKX2-5
M05348_2.00
Homo sapiens
BTYAACGAB

VTCGTTRAV
SELEX
Yin et al.(2017)
NKX2-5_FL_Methyl-HT-SELEX_2
0.610 0.509
NKX2-5
M00322_2.00
Homo sapiens
NNNRNNN

NNNYNNN
PBM
Barrera et al.(2016)
NKX2-5_R190C
0.610 0.491
NKX2-5
M00324_2.00
Homo sapiens
NHNNNNN

NNNNNDN
PBM
Barrera et al.(2016)
NKX2-5_T178M
0.610 0.491
Nkx2-3
M00497_2.00
Mus musculus
NNRAGDRNN

NNYHCTYNN
PBM
Berger et al.(2008)
Nkx2-3_3435
0.610 0.474
NKX2-3
M05042_2.00
Homo sapiens
NNBAAGTGBN

NVCACTTVNN
SELEX
Yin et al.(2017)
NKX2-3_eDBD_HT-SELEX
0.610 0.474
NKX2-3
M05045_2.00
Homo sapiens
BNBAAGTGBN

NVCACTTVNV
SELEX
Yin et al.(2017)
NKX2-3_FL_HT-SELEX
0.610 0.474
NKX2-3
M05043_2.00
Homo sapiens
BNBAAGTGBN

NVCACTTVNV
SELEX
Yin et al.(2017)
NKX2-3_eDBD_Methyl-HT-SELEX_1
0.610 0.474
NKX2-3
M05044_2.00
Homo sapiens
SDYAACGHB

VDCGTTRHS
SELEX
Yin et al.(2017)
NKX2-3_eDBD_Methyl-HT-SELEX_2
0.610 0.474
NKX2-3
M05046_2.00
Homo sapiens
BNBAAGTGBN

NVCACTTVNV
SELEX
Yin et al.(2017)
NKX2-3_FL_Methyl-HT-SELEX_1
0.610 0.474
NKX2-3
M05047_2.00
Homo sapiens
SWYAACSHB

VDSGTTRWS
SELEX
Yin et al.(2017)
NKX2-3_FL_Methyl-HT-SELEX_2
0.610 0.474
Pph13
M03845_2.00
Drosophila melanogaster
NTAATTRN

NYAATTAN
SELEX
Nitta et al.(2015)
Pph13_1
0.608 0.649
Pph13
M06522_2.00
Drosophila melanogaster
NTAATTR

YAATTAN
B1H
Mathelier et al.(2014)
MA0200.1
0.608 0.649
Pph13
M06321_2.00
Drosophila melanogaster
NHTAATTR

YAATTADN
B1H
Zhu et al.(2011)
Pph13_Cell_FBgn0023489
0.608 0.649
Pph13
M06322_2.00
Drosophila melanogaster
YTAATTR

YAATTAR
B1H
Zhu et al.(2011)
Pph13_SOLEXA_FBgn0023489
0.608 0.649
CG11294
M03855_2.00
Drosophila melanogaster
TAATTVVATTA

TAATBBAATTA
SELEX
Nitta et al.(2015)
CG11294_1
0.608 0.649
CG11294
M03856_2.00
Drosophila melanogaster
TAATTDVATTA

TAATBHAATTA
SELEX
Nitta et al.(2015)
CG11294_2
0.608 0.649
CG11294
M06531_2.00
Drosophila melanogaster
TAATTAA

TTAATTA
B1H
Mathelier et al.(2014)
MA0172.1
0.608 0.649
CG11294
M06337_2.00
Drosophila melanogaster
TAATTAA

TTAATTA
B1H
Zhu et al.(2011)
CG11294_Cell_FBgn0030058
0.608 0.649
CG11294
M06338_2.00
Drosophila melanogaster
HTAATTR

YAATTAD
B1H
Zhu et al.(2011)
CG11294_SOLEXA_FBgn0030058
0.608 0.649
Uncx
M00443_2.00
Mus musculus
NTAATNDN

NHNATTAN
PBM
Berger et al.(2008)
Uncx4
0.608 0.649
uncx
M02111_2.00
Tetraodon nigroviridis
NNTAATTRN

NYAATTANN
PBM
Weirauch et al.(2014)
pTH5474
0.608 0.649
UNCX
M03191_2.00
Homo sapiens
NWAATTVVRTHWN

NWDAYBBAATTWN
SELEX
Jolma et al.(2013)
UNCX_1
0.608 0.649
UNCX
M03192_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
UNCX_2
0.608 0.649
Uncx
M03264_2.00
Mus musculus
NTAATTVRATTAN

NTAATYBAATTAN
SELEX
Jolma et al.(2013)
Uncx_1
0.608 0.649
Uncx
M03265_2.00
Mus musculus
NTAATTRR

YYAATTAN
SELEX
Jolma et al.(2013)
Uncx_2
0.608 0.649
UNCX
M05240_2.00
Homo sapiens
NYAATTRV

BYAATTRN
SELEX
Yin et al.(2017)
UNCX_eDBD_HT-SELEX
0.608 0.649
UNCX
M05241_2.00
Homo sapiens
NYRRYKNN

NNMRYYRN
SELEX
Yin et al.(2017)
UNCX_eDBD_Methyl-HT-SELEX
0.608 0.649
hbn
M03813_2.00
Drosophila melanogaster
HTAATYTAATTAD

HTAATTARATTAD
SELEX
Nitta et al.(2015)
hbn_1
0.608 0.632
hbn
M06506_2.00
Drosophila melanogaster
TTAATTR

YAATTAA
B1H
Mathelier et al.(2014)
MA0226.1
0.608 0.632
hbn
M06291_2.00
Drosophila melanogaster
TWAWTTR

YAAWTWA
B1H
Zhu et al.(2011)
Hbn_Cell_FBgn0008636
0.608 0.632
hbn
M06292_2.00
Drosophila melanogaster
NHTAATTR

YAATTADN
B1H
Zhu et al.(2011)
Hbn_SOLEXA_FBgn0008636
0.608 0.632
Alx3
M00402_2.00
Mus musculus
WAATNDN

NHNATTW
PBM
Berger et al.(2008)
Alx3_3418
0.607 0.702
Alx1
M00471_2.00
Mus musculus
NTAATTRN

NYAATTAN
PBM
Berger et al.(2008)
Cart1_0997
0.607 0.702
Alx1
M00472_2.00
Mus musculus
NTAATDDN

NHHATTAN
PBM
Berger et al.(2008)
Cart1_1275
0.607 0.702
Alx4
M00487_2.00
Mus musculus
NTAATDDN

NHHATTAN
PBM
Berger et al.(2008)
Alx4_1744
0.607 0.702
ALX3
M03172_2.00
Homo sapiens
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
ALX3_1
0.607 0.702
ALX3
M03173_2.00
Homo sapiens
NNTAATTRNN

NNYAATTANN
SELEX
Jolma et al.(2013)
ALX3_2
0.607 0.702
ALX3
M03174_2.00
Homo sapiens
NTAATYNRATTAN

NTAATYNRATTAN
SELEX
Jolma et al.(2013)
ALX3_3
0.607 0.702
ALX4
M03079_2.00
Homo sapiens
NTAATYNRRTTAN

NTAAYYNRATTAN
SELEX
Jolma et al.(2013)
ALX4_1
0.607 0.702
ALX1
M03226_2.00
Homo sapiens
NTAATTRVRTTAN

NTAAYBYAATTAN
SELEX
Jolma et al.(2013)
CART1_1
0.607 0.702
Alx1
M03272_2.00
Mus musculus
NNTAATTRRD

HYYAATTANN
SELEX
Jolma et al.(2013)
Alx1_1
0.607 0.702
Alx1
M03273_2.00
Mus musculus
NTAATYNRATTAN

NTAATYNRATTAN
SELEX
Jolma et al.(2013)
Alx1_2
0.607 0.702
Alx4
M03278_2.00
Mus musculus
NTAATYNRATTAN

NTAATYNRATTAN
SELEX
Jolma et al.(2013)
Alx4_1
0.607 0.702
ALX1
M05327_2.00
Homo sapiens
TAATYTAATTA

TAATTARATTA
SELEX
Yin et al.(2017)
ALX1_FL_HT-SELEX
0.607 0.702
ALX3
M05195_2.00
Homo sapiens
NTAATTRR

YYAATTAN
SELEX
Yin et al.(2017)
ALX3_eDBD_HT-SELEX
0.607 0.702
ALX3
M05198_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
ALX3_FL_HT-SELEX
0.607 0.702
ALX4
M04917_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
ALX4_eDBD_HT-SELEX
0.607 0.702
ALX1
M09160_2.00
Homo sapiens
VTAATYRVATTA

TAATBYRATTAB
Misc
Kulakovskiy et al.(2013)
ALX1_HUMAN.H11MO.0.B
0.607 0.702
Alx1
M09201_2.00
Mus musculus
VTAATYRVATTA

TAATBYRATTAB
Misc
Kulakovskiy et al.(2013)
ALX1_MOUSE.H11MO.0.B
0.607 0.702
ALX4
M10637_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ALX4_01
0.607 0.702
ALX1
M10741_2.00
Homo sapiens
VVHTAATKNNHATTABYN

NRVTAATDNNMATTADBB
Transfac
Matys et al.(2006)
V$CART1_01
0.607 0.702
ALX1
M05328_2.00
Homo sapiens
TAATYTAATTA

TAATTARATTA
SELEX
Yin et al.(2017)
ALX1_FL_Methyl-HT-SELEX
0.607 0.702
ALX3
M05196_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
ALX3_eDBD_Methyl-HT-SELEX_1
0.607 0.702
ALX3
M05197_2.00
Homo sapiens
NTAAYBHN

NDVRTTAN
SELEX
Yin et al.(2017)
ALX3_eDBD_Methyl-HT-SELEX_2
0.607 0.702
ALX3
M05199_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
ALX3_FL_Methyl-HT-SELEX_1
0.607 0.702
ALX3
M05200_2.00
Homo sapiens
NTAAYGHN

NDCRTTAN
SELEX
Yin et al.(2017)
ALX3_FL_Methyl-HT-SELEX_2
0.607 0.702
ALX4
M04918_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
ALX4_eDBD_Methyl-HT-SELEX_1
0.607 0.702
ALX4
M04919_2.00
Homo sapiens
NTWAYGHN

NDCRTWAN
SELEX
Yin et al.(2017)
ALX4_eDBD_Methyl-HT-SELEX_2
0.607 0.702
ENSCING00000016045
M02078_2.00
Ciona intestinalis
NNYTAATTRGN

NCYAATTARNN
PBM
Weirauch et al.(2014)
pTH6551
0.606 0.684
ceh-28
M08210_2.00
Caenorhabditis elegans
AATCGATW

WATCGATT
ChIP-seq
Contrino et al.(2012)
Mw138
0.606 0.456
Isx
M00452_2.00
Mus musculus
NNHDATNN

NNATHDNN
PBM
Berger et al.(2008)
Isx_3445
0.605 0.667
tin
M00559_2.00
Drosophila melanogaster
NWYAAGTGGNN

NNCCACTTRWN
PBM
Busser et al.(2012a)
Tin
0.601 0.404
tin
M03809_2.00
Drosophila melanogaster
BTYAAGTGSN

NSCACTTRAV
SELEX
Nitta et al.(2015)
tin_1
0.601 0.404
tin
M06284_2.00
Drosophila melanogaster
BTYAAGTG

CACTTRAV
B1H
Zhu et al.(2011)
Tin_Cell_FBgn0004110
0.601 0.404
tin
M06285_2.00
Drosophila melanogaster
BCTCAAGTGSVN

NBSCACTTGAGV
B1H
Zhu et al.(2011)
tin_FlyReg_FBgn0004110
0.601 0.404
tin
M06286_2.00
Drosophila melanogaster
BWYAAGTR

YACTTRWV
B1H
Zhu et al.(2011)
Tin_SOLEXA_FBgn0004110
0.601 0.404
tin
M08421_2.00
Drosophila melanogaster
DBTCRAGTGS

SCACTYGAVH
ChIP-chip
Mathelier et al.(2014)
MA0247.2
0.601 0.404
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000013013 Homeodomain 54 110

Links

Other Homeodomain family TFs
Other Oreochromis niloticus TFs

Invalid Input OrderBy

1089 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action