CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSOPRG00000003187
(
Ochotona princeps
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSOPRG00000003187
T213707_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARX
M00265_2.00
Homo sapiens
DTAATTRK
MYAATTAH
PBM
Barrera et al.(2016)
ARX_T333N
0.730
0.614
UM04928
M02178_2.00
Ustilago maydis
NNNHMATHHN
NDDATKDNNN
PBM
Weirauch et al.(2014)
pTH5932
0.631
0.421
ESX1
M00292_2.00
Homo sapiens
NNTAATNDN
NHNATTANN
PBM
Barrera et al.(2016)
ESX1_REF
0.630
0.667
ESX1
M03137_2.00
Homo sapiens
NNTAATTRNN
NNYAATTANN
SELEX
Jolma et al.(2013)
ESX1_1
0.630
0.667
ESX1
M03138_2.00
Homo sapiens
NNTAATTRNN
NNYAATTANN
SELEX
Jolma et al.(2013)
ESX1_2
0.630
0.667
ESX1
M05087_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
ESX1_eDBD_HT-SELEX
0.630
0.667
ESX1
M05089_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
ESX1_FL_HT-SELEX
0.630
0.667
ESX1
M05088_2.00
Homo sapiens
NTAATTRR
YYAATTAN
SELEX
Yin et al.(2017)
ESX1_eDBD_Methyl-HT-SELEX
0.630
0.667
ESX1
M05090_2.00
Homo sapiens
NTAATTRR
YYAATTAN
SELEX
Yin et al.(2017)
ESX1_FL_Methyl-HT-SELEX
0.630
0.667
Esx1
M00424_2.00
Mus musculus
NYTAATWR
YWATTARN
PBM
Berger et al.(2008)
Esx1_3124
0.614
0.667
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000002932
Homeodomain
83
139
ERRRNVYTEVQVQELERFFLRVQYPDVIARAQLAERLNLAEAKVQVWFQNRRAKWRR
Links
Other
Homeodomain
family TFs
Other
Ochotona princeps
TFs
70 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy