HNF1B (Ochotona princeps)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSOPRG00000003933 T213713_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hnf1b
M00408_2.00
Mus musculus
NNHWCNNN

NNNGWDNN
PBM
Berger et al.(2008)
Tcf2_0913
0.867 1.000
HNF1B
M03245_2.00
Homo sapiens
GTTAATNATTAAY

RTTAATNATTAAC
SELEX
Jolma et al.(2013)
HNF1B_1
0.867 1.000
HNF1B
M03246_2.00
Homo sapiens
NGTTAATNATTAAYN

NRTTAATNATTAACN
SELEX
Jolma et al.(2013)
HNF1B_2
0.867 1.000
HNF1B
M09168_2.00
Homo sapiens
DGTTAATRATTAACH

DGTTAATYATTAACH
Misc
Kulakovskiy et al.(2013)
HNF1B_HUMAN.H11MO.0.A
0.867 1.000
Hnf1b
M09179_2.00
Mus musculus
DGTTAATRATTAACH

DGTTAATYATTAACH
Misc
Kulakovskiy et al.(2013)
HNF1B_MOUSE.H11MO.0.A
0.867 1.000
HNF1B
M10758_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1B_Q6_01
0.867 1.000
HNF1B
M10759_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1B_Q6
0.867 1.000
HNF1B
M10760_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LFA1_Q6
0.867 1.000
HNF1A
M03150_2.00
Homo sapiens
NGTTAATNATTAAYN

NRTTAATNATTAACN
SELEX
Jolma et al.(2013)
HNF1A_1
0.866 0.945
HNF1A
M09144_2.00
Homo sapiens
DGTTAATKATTAACH

DGTTAATMATTAACH
Misc
Kulakovskiy et al.(2013)
HNF1A_HUMAN.H11MO.0.C
0.866 0.945
HNF1A
M10690_2.00
Homo sapiens
RGTTAATDWTTRMHV

BDKYAAWHATTAACY
Transfac
Matys et al.(2006)
V$HNF1_01
0.866 0.945
HNF1A
M10691_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1A_Q4
0.866 0.945
HNF1A
M10692_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1A_Q5
0.866 0.945
HNF1A
M10693_2.00
Homo sapiens
DGBTAATBAWTHAMYWM

KWRKTDAWTVATTAVCH
Transfac
Matys et al.(2006)
V$HNF1_C
0.866 0.945
Hnf1a
M00171_2.00
Mus musculus
HTAAYYNN

NNRRTTAD
PBM
Badis et al.(2009)
Tcf1_2666
0.859 0.927
Hnf1a
M00444_2.00
Mus musculus
HTAAYYNNN

NNNRRTTAD
PBM
Berger et al.(2008)
Tcf1_2666
0.859 0.927
Hnf1a
M09191_2.00
Mus musculus
RGTTAATNWTTDMHN

NDKHAAWNATTAACY
Misc
Kulakovskiy et al.(2013)
HNF1A_MOUSE.H11MO.0.A
0.859 0.927
Hmbox1
M00419_2.00
Mus musculus
NNNGWNNN

NNNWCNNN
PBM
Berger et al.(2008)
Hmbox1_2674
0.638 0.382
HMBOX1
M03167_2.00
Homo sapiens
BKTAACTARB

VYTAGTTAMV
SELEX
Jolma et al.(2013)
HMBOX1_1
0.638 0.382
HMBOX1
M05180_2.00
Homo sapiens
BTAACYAGB

VCTRGTTAV
SELEX
Yin et al.(2017)
HMBOX1_eDBD_HT-SELEX
0.638 0.382
HMBOX1
M05181_2.00
Homo sapiens
NTAACTAGB

VCTAGTTAN
SELEX
Yin et al.(2017)
HMBOX1_eDBD_Methyl-HT-SELEX
0.638 0.382
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000003616 Homeodomain 232 307

Links

Other Homeodomain family TFs
Other Ochotona princeps TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R003860 Calypte anna Aan_R003860 I 0.000
Aan_R015322 Calypte anna Aan_R015322 I 0.000
Afo_R009327 Aptenodytes forsteri Afo_R009327 I 0.000
Alligator_sinensis_CCG001714.1 Alligator sinensis Alligator_sinensis_CCG001714.1 I 0.000
Cmyd_10017459 Chelonia mydas Cmyd_10017459 I 0.000
Cmyd_10021444 Chelonia mydas Cmyd_10021444 I 0.000
NFATC1 Anolis carolinensis ENSACAG00000000941 I 0.000
NFATC2 Anolis carolinensis ENSACAG00000013075 I 0.000
ENSAMEG00000015941 Ailuropoda melanoleuca ENSAMEG00000015941 I 0.000
ENSAMXG00000005881 Astyanax mexicanus ENSAMXG00000005881 I 0.000
ENSAMXG00000011048 Astyanax mexicanus ENSAMXG00000011048 I 0.000
ENSAPLG00000013017 Anas platyrhynchos ENSAPLG00000013017 I 0.000
NFATC1 Bos taurus ENSBTAG00000000656 I 0.000
NFATC4 Bos taurus ENSBTAG00000006366 I 0.000
NFATC4 Canis familiaris ENSCAFG00000012375 I 0.000
ENSCJAG00000000574 Callithrix jacchus ENSCJAG00000000574 I 0.000
NFATC4 Callithrix jacchus ENSCJAG00000006414 I 0.000
NFATC1 Callithrix jacchus ENSCJAG00000023446 I 0.000
NFATC1 Cavia porcellus ENSCPOG00000003999 I 0.000
nfatc1 Danio rerio ENSDARG00000036168 I 0.000
nfatc3a Danio rerio ENSDARG00000076297 I 0.000
nfatc2b Danio rerio ENSDARG00000079972 I 0.000
NFATC3 Dasypus novemcinctus ENSDNOG00000018583 I 0.000
NFATC1 Dasypus novemcinctus ENSDNOG00000025306 I 0.000
NFATC4 Equus caballus ENSECAG00000010992 I 0.000
NFATC1 Equus caballus ENSECAG00000019813 I 0.000
NFATC1 Echinops telfairi ENSETEG00000010848 I 0.000
ENSFALG00000007757 Ficedula albicollis ENSFALG00000007757 I 0.000
ENSFALG00000013042 Ficedula albicollis ENSFALG00000013042 I 0.000
ENSFALG00000013333 Ficedula albicollis ENSFALG00000013333 I 0.000
NFATC4 Felis catus ENSFCAG00000005602 I 0.000
NFATC3 Felis catus ENSFCAG00000030997 I 0.000
NFATC4 Homo sapiens ENSG00000100968 D 0.000
NFATC1 Gasterosteus aculeatus ENSGACG00000005481 I 0.000
NFATC3 Gallus gallus ENSGALG00000003396 I 0.000
NFATC2 Gallus gallus ENSGALG00000007963 I 0.000
ENSGALG00000012654 Gallus gallus ENSGALG00000012654 I 0.000
NFATC3 Gorilla gorilla ENSGGOG00000010145 I 0.000
ENSGMOG00000006631 Gadus morhua ENSGMOG00000006631 I 0.000
ENSGMOG00000010903 Gadus morhua ENSGMOG00000010903 N 0.000
ENSGMOG00000017004 Gadus morhua ENSGMOG00000017004 I 0.000
ENSLACG00000001332 Latimeria chalumnae ENSLACG00000001332 I 0.000
ENSLACG00000001788 Latimeria chalumnae ENSLACG00000001788 I 0.000
ENSLACG00000008030 Latimeria chalumnae ENSLACG00000008030 I 0.000
NFATC1 Loxodonta africana ENSLAFG00000008297 I 0.000
NFATC4 Loxodonta africana ENSLAFG00000014579 I 0.000
NFATC3 Loxodonta africana ENSLAFG00000014599 I 0.000
ENSLOCG00000002372 Lepisosteus oculatus ENSLOCG00000002372 I 0.000
NFATC1 Meleagris gallopavo ENSMGAG00000002215 D 0.000
NFATC3 Meleagris gallopavo ENSMGAG00000003992 I 0.000
NFATC2 Meleagris gallopavo ENSMGAG00000009346 I 0.000
NFATC2 Microcebus murinus ENSMICG00000000025 N 0.000
NFATC4 Myotis lucifugus ENSMLUG00000011274 I 0.000
NFATC2 Macaca mulatta ENSMMUG00000012657 N 0.000
NFATC4 Monodelphis domestica ENSMODG00000002992 I 0.000
NFATC2 Monodelphis domestica ENSMODG00000016363 I 0.000
ENSMPUG00000005665 Mustela putorius furo ENSMPUG00000005665 I 0.000
ENSMPUG00000006942 Mustela putorius furo ENSMPUG00000006942 I 0.000
ENSMPUG00000016650 Mustela putorius furo ENSMPUG00000016650 I 0.000
Nfatc3 Mus musculus ENSMUSG00000031902 D 0.000
Nfatc1 Mus musculus ENSMUSG00000033016 D 0.000
ENSNLEG00000005116 Nomascus leucogenys ENSNLEG00000005116 I 0.000
NFATC2 Ornithorhynchus anatinus ENSOANG00000008671 I 0.000
ENSOARG00000004215 Ovis aries ENSOARG00000004215 I 0.000
ENSOARG00000019084 Ovis aries ENSOARG00000019084 I 0.000
ENSONIG00000007307 Oreochromis niloticus ENSONIG00000007307 I 0.000
ENSONIG00000010613 Oreochromis niloticus ENSONIG00000010613 I 0.000
ENSONIG00000013792 Oreochromis niloticus ENSONIG00000013792 I 0.000
ENSONIG00000016552 Oreochromis niloticus ENSONIG00000016552 I 0.000
nfatc1 Oryzias latipes ENSORLG00000008055 I 0.000
ENSP00000388910-D1 Bos grunniens ENSP00000388910-D1 I 0.000
ENSPCAG00000002972 Procavia capensis ENSPCAG00000002972 I 0.000
NFATC3 Procavia capensis ENSPCAG00000005143 I 0.000
ENSPFOG00000000831 Poecilia formosa ENSPFOG00000000831 I 0.000
ENSPFOG00000021891 Poecilia formosa ENSPFOG00000021891 I 0.000
ENSPFOG00000022114 Poecilia formosa ENSPFOG00000022114 N 0.000
ENSPPYG00000007483 Pongo abelii ENSPPYG00000007483 I 0.000
ENSPSIG00000013745 Pelodiscus sinensis ENSPSIG00000013745 I 0.000
Nfatc1 Rattus norvegicus ENSRNOG00000017146 I 0.000
Nfatc4 Rattus norvegicus ENSRNOG00000020482 I 0.000
Nfatc3 Rattus norvegicus ENSRNOG00000054264 I 0.000
ENSSARG00000011370 Sorex araneus ENSSARG00000011370 I 0.000
ENSSHAG00000006860 Sarcophilus harrisii ENSSHAG00000006860 I 0.000
ENSSHAG00000010150 Sarcophilus harrisii ENSSHAG00000010150 I 0.000
ENSSHAG00000018222 Sarcophilus harrisii ENSSHAG00000018222 I 0.000
NFATC4 Sus scrofa ENSSSCG00000001986 I 0.000
NFATC2 Tupaia belangeri ENSTBEG00000004525 I 0.000
NFATC3 Taeniopygia guttata ENSTGUG00000007006 I 0.000
ENSTNIG00000003611 Tetraodon nigroviridis ENSTNIG00000003611 I 0.000
ENSTNIG00000018271 Tetraodon nigroviridis ENSTNIG00000018271 D 0.000
ENSTNIG00000018395 Tetraodon nigroviridis ENSTNIG00000018395 I 0.000
nfatc3a Takifugu rubripes ENSTRUG00000007833 I 0.000
ENSTRUG00000010864 Takifugu rubripes ENSTRUG00000010864 I 0.000
ENSTSYG00000005095 Tarsius syrichta ENSTSYG00000005095 I 0.000
ENSXMAG00000000761 Xiphophorus maculatus ENSXMAG00000000761 I 0.000
ENSXMAG00000003976 Xiphophorus maculatus ENSXMAG00000003976 I 0.000
ENSXMAG00000009087 Xiphophorus maculatus ENSXMAG00000009087 I 0.000
Gfo_R000615 Geospiza fortis Gfo_R000615 I 0.000
Gfo_R009589 Geospiza fortis Gfo_R009589 I 0.000
Gfo_R015940 Geospiza fortis Gfo_R015940 I 0.000
Myotis_brandtii_NFATC3_10015104 Myotis brandtii Myotis_brandtii_NFATC3_10015104 I 0.000
Myotis_brandtii_Nfatc4_10003693 Myotis brandtii Myotis_brandtii_Nfatc4_10003693 I 0.000
Ogr08131 Ophisaurus gracilis Ogr08131 I 0.000
Pvit_03343 Pogona vitticeps Pvit_03343 I 0.000
Pvit_05133 Pogona vitticeps Pvit_05133 I 0.000
Pvit_07799 Pogona vitticeps Pvit_07799 I 0.000
nfatc3.S Xenopus laevis XB-GENE-866300 I 0.000
nfatc1 Xenopus tropicalis XB-GENE-876756 D 0.000