CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HNF1B
(
Ochotona princeps
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSOPRG00000003933
T213713_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hnf1b
M00408_2.00
Mus musculus
NNHWCNNN
NNNGWDNN
PBM
Berger et al.(2008)
Tcf2_0913
0.867
1.000
HNF1B
M03245_2.00
Homo sapiens
GTTAATNATTAAY
RTTAATNATTAAC
SELEX
Jolma et al.(2013)
HNF1B_1
0.867
1.000
HNF1B
M03246_2.00
Homo sapiens
NGTTAATNATTAAYN
NRTTAATNATTAACN
SELEX
Jolma et al.(2013)
HNF1B_2
0.867
1.000
HNF1B
M09168_2.00
Homo sapiens
DGTTAATRATTAACH
DGTTAATYATTAACH
Misc
Kulakovskiy et al.(2013)
HNF1B_HUMAN.H11MO.0.A
0.867
1.000
Hnf1b
M09179_2.00
Mus musculus
DGTTAATRATTAACH
DGTTAATYATTAACH
Misc
Kulakovskiy et al.(2013)
HNF1B_MOUSE.H11MO.0.A
0.867
1.000
HNF1B
M10758_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1B_Q6_01
0.867
1.000
HNF1B
M10759_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1B_Q6
0.867
1.000
HNF1B
M10760_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LFA1_Q6
0.867
1.000
HNF1A
M03150_2.00
Homo sapiens
NGTTAATNATTAAYN
NRTTAATNATTAACN
SELEX
Jolma et al.(2013)
HNF1A_1
0.866
0.945
HNF1A
M09144_2.00
Homo sapiens
DGTTAATKATTAACH
DGTTAATMATTAACH
Misc
Kulakovskiy et al.(2013)
HNF1A_HUMAN.H11MO.0.C
0.866
0.945
HNF1A
M10690_2.00
Homo sapiens
RGTTAATDWTTRMHV
BDKYAAWHATTAACY
Transfac
Matys et al.(2006)
V$HNF1_01
0.866
0.945
HNF1A
M10691_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1A_Q4
0.866
0.945
HNF1A
M10692_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1A_Q5
0.866
0.945
HNF1A
M10693_2.00
Homo sapiens
DGBTAATBAWTHAMYWM
KWRKTDAWTVATTAVCH
Transfac
Matys et al.(2006)
V$HNF1_C
0.866
0.945
Hnf1a
M00171_2.00
Mus musculus
HTAAYYNN
NNRRTTAD
PBM
Badis et al.(2009)
Tcf1_2666
0.859
0.927
Hnf1a
M00444_2.00
Mus musculus
HTAAYYNNN
NNNRRTTAD
PBM
Berger et al.(2008)
Tcf1_2666
0.859
0.927
Hnf1a
M09191_2.00
Mus musculus
RGTTAATNWTTDMHN
NDKHAAWNATTAACY
Misc
Kulakovskiy et al.(2013)
HNF1A_MOUSE.H11MO.0.A
0.859
0.927
Hmbox1
M00419_2.00
Mus musculus
NNNGWNNN
NNNWCNNN
PBM
Berger et al.(2008)
Hmbox1_2674
0.638
0.382
HMBOX1
M03167_2.00
Homo sapiens
BKTAACTARB
VYTAGTTAMV
SELEX
Jolma et al.(2013)
HMBOX1_1
0.638
0.382
HMBOX1
M05180_2.00
Homo sapiens
BTAACYAGB
VCTRGTTAV
SELEX
Yin et al.(2017)
HMBOX1_eDBD_HT-SELEX
0.638
0.382
HMBOX1
M05181_2.00
Homo sapiens
NTAACTAGB
VCTAGTTAN
SELEX
Yin et al.(2017)
HMBOX1_eDBD_Methyl-HT-SELEX
0.638
0.382
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000003616
Homeodomain
232
307
RRNRFKWGPASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWFANRRKEE
Links
Other
Homeodomain
family TFs
Other
Ochotona princeps
TFs
210 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R003860
Calypte anna
Aan_R003860
I
0.000
Aan_R015322
Calypte anna
Aan_R015322
I
0.000
Afo_R009327
Aptenodytes forsteri
Afo_R009327
I
0.000
Alligator_sinensis_CCG001714.1
Alligator sinensis
Alligator_sinensis_CCG001714.1
I
0.000
Cmyd_10017459
Chelonia mydas
Cmyd_10017459
I
0.000
Cmyd_10021444
Chelonia mydas
Cmyd_10021444
I
0.000
NFATC1
Anolis carolinensis
ENSACAG00000000941
I
0.000
NFATC2
Anolis carolinensis
ENSACAG00000013075
I
0.000
ENSAMEG00000015941
Ailuropoda melanoleuca
ENSAMEG00000015941
I
0.000
ENSAMXG00000005881
Astyanax mexicanus
ENSAMXG00000005881
I
0.000
ENSAMXG00000011048
Astyanax mexicanus
ENSAMXG00000011048
I
0.000
ENSAPLG00000013017
Anas platyrhynchos
ENSAPLG00000013017
I
0.000
NFATC1
Bos taurus
ENSBTAG00000000656
I
0.000
NFATC4
Bos taurus
ENSBTAG00000006366
I
0.000
NFATC4
Canis familiaris
ENSCAFG00000012375
I
0.000
ENSCJAG00000000574
Callithrix jacchus
ENSCJAG00000000574
I
0.000
NFATC4
Callithrix jacchus
ENSCJAG00000006414
I
0.000
NFATC1
Callithrix jacchus
ENSCJAG00000023446
I
0.000
NFATC1
Cavia porcellus
ENSCPOG00000003999
I
0.000
nfatc1
Danio rerio
ENSDARG00000036168
I
0.000
nfatc3a
Danio rerio
ENSDARG00000076297
I
0.000
nfatc2b
Danio rerio
ENSDARG00000079972
I
0.000
NFATC3
Dasypus novemcinctus
ENSDNOG00000018583
I
0.000
NFATC1
Dasypus novemcinctus
ENSDNOG00000025306
I
0.000
NFATC4
Equus caballus
ENSECAG00000010992
I
0.000
NFATC1
Equus caballus
ENSECAG00000019813
I
0.000
NFATC1
Echinops telfairi
ENSETEG00000010848
I
0.000
ENSFALG00000007757
Ficedula albicollis
ENSFALG00000007757
I
0.000
ENSFALG00000013042
Ficedula albicollis
ENSFALG00000013042
I
0.000
ENSFALG00000013333
Ficedula albicollis
ENSFALG00000013333
I
0.000
NFATC4
Felis catus
ENSFCAG00000005602
I
0.000
NFATC3
Felis catus
ENSFCAG00000030997
I
0.000
NFATC4
Homo sapiens
ENSG00000100968
D
0.000
NFATC1
Gasterosteus aculeatus
ENSGACG00000005481
I
0.000
NFATC3
Gallus gallus
ENSGALG00000003396
I
0.000
NFATC2
Gallus gallus
ENSGALG00000007963
I
0.000
ENSGALG00000012654
Gallus gallus
ENSGALG00000012654
I
0.000
NFATC3
Gorilla gorilla
ENSGGOG00000010145
I
0.000
ENSGMOG00000006631
Gadus morhua
ENSGMOG00000006631
I
0.000
ENSGMOG00000010903
Gadus morhua
ENSGMOG00000010903
N
0.000
ENSGMOG00000017004
Gadus morhua
ENSGMOG00000017004
I
0.000
ENSLACG00000001332
Latimeria chalumnae
ENSLACG00000001332
I
0.000
ENSLACG00000001788
Latimeria chalumnae
ENSLACG00000001788
I
0.000
ENSLACG00000008030
Latimeria chalumnae
ENSLACG00000008030
I
0.000
NFATC1
Loxodonta africana
ENSLAFG00000008297
I
0.000
NFATC4
Loxodonta africana
ENSLAFG00000014579
I
0.000
NFATC3
Loxodonta africana
ENSLAFG00000014599
I
0.000
ENSLOCG00000002372
Lepisosteus oculatus
ENSLOCG00000002372
I
0.000
NFATC1
Meleagris gallopavo
ENSMGAG00000002215
D
0.000
NFATC3
Meleagris gallopavo
ENSMGAG00000003992
I
0.000
NFATC2
Meleagris gallopavo
ENSMGAG00000009346
I
0.000
NFATC2
Microcebus murinus
ENSMICG00000000025
N
0.000
NFATC4
Myotis lucifugus
ENSMLUG00000011274
I
0.000
NFATC2
Macaca mulatta
ENSMMUG00000012657
N
0.000
NFATC4
Monodelphis domestica
ENSMODG00000002992
I
0.000
NFATC2
Monodelphis domestica
ENSMODG00000016363
I
0.000
ENSMPUG00000005665
Mustela putorius furo
ENSMPUG00000005665
I
0.000
ENSMPUG00000006942
Mustela putorius furo
ENSMPUG00000006942
I
0.000
ENSMPUG00000016650
Mustela putorius furo
ENSMPUG00000016650
I
0.000
Nfatc3
Mus musculus
ENSMUSG00000031902
D
0.000
Nfatc1
Mus musculus
ENSMUSG00000033016
D
0.000
ENSNLEG00000005116
Nomascus leucogenys
ENSNLEG00000005116
I
0.000
NFATC2
Ornithorhynchus anatinus
ENSOANG00000008671
I
0.000
ENSOARG00000004215
Ovis aries
ENSOARG00000004215
I
0.000
ENSOARG00000019084
Ovis aries
ENSOARG00000019084
I
0.000
ENSONIG00000007307
Oreochromis niloticus
ENSONIG00000007307
I
0.000
ENSONIG00000010613
Oreochromis niloticus
ENSONIG00000010613
I
0.000
ENSONIG00000013792
Oreochromis niloticus
ENSONIG00000013792
I
0.000
ENSONIG00000016552
Oreochromis niloticus
ENSONIG00000016552
I
0.000
nfatc1
Oryzias latipes
ENSORLG00000008055
I
0.000
ENSP00000388910-D1
Bos grunniens
ENSP00000388910-D1
I
0.000
ENSPCAG00000002972
Procavia capensis
ENSPCAG00000002972
I
0.000
NFATC3
Procavia capensis
ENSPCAG00000005143
I
0.000
ENSPFOG00000000831
Poecilia formosa
ENSPFOG00000000831
I
0.000
ENSPFOG00000021891
Poecilia formosa
ENSPFOG00000021891
I
0.000
ENSPFOG00000022114
Poecilia formosa
ENSPFOG00000022114
N
0.000
ENSPPYG00000007483
Pongo abelii
ENSPPYG00000007483
I
0.000
ENSPSIG00000013745
Pelodiscus sinensis
ENSPSIG00000013745
I
0.000
Nfatc1
Rattus norvegicus
ENSRNOG00000017146
I
0.000
Nfatc4
Rattus norvegicus
ENSRNOG00000020482
I
0.000
Nfatc3
Rattus norvegicus
ENSRNOG00000054264
I
0.000
ENSSARG00000011370
Sorex araneus
ENSSARG00000011370
I
0.000
ENSSHAG00000006860
Sarcophilus harrisii
ENSSHAG00000006860
I
0.000
ENSSHAG00000010150
Sarcophilus harrisii
ENSSHAG00000010150
I
0.000
ENSSHAG00000018222
Sarcophilus harrisii
ENSSHAG00000018222
I
0.000
NFATC4
Sus scrofa
ENSSSCG00000001986
I
0.000
NFATC2
Tupaia belangeri
ENSTBEG00000004525
I
0.000
NFATC3
Taeniopygia guttata
ENSTGUG00000007006
I
0.000
ENSTNIG00000003611
Tetraodon nigroviridis
ENSTNIG00000003611
I
0.000
ENSTNIG00000018271
Tetraodon nigroviridis
ENSTNIG00000018271
D
0.000
ENSTNIG00000018395
Tetraodon nigroviridis
ENSTNIG00000018395
I
0.000
nfatc3a
Takifugu rubripes
ENSTRUG00000007833
I
0.000
ENSTRUG00000010864
Takifugu rubripes
ENSTRUG00000010864
I
0.000
ENSTSYG00000005095
Tarsius syrichta
ENSTSYG00000005095
I
0.000
ENSXMAG00000000761
Xiphophorus maculatus
ENSXMAG00000000761
I
0.000
ENSXMAG00000003976
Xiphophorus maculatus
ENSXMAG00000003976
I
0.000
ENSXMAG00000009087
Xiphophorus maculatus
ENSXMAG00000009087
I
0.000
Gfo_R000615
Geospiza fortis
Gfo_R000615
I
0.000
Gfo_R009589
Geospiza fortis
Gfo_R009589
I
0.000
Gfo_R015940
Geospiza fortis
Gfo_R015940
I
0.000
Myotis_brandtii_NFATC3_10015104
Myotis brandtii
Myotis_brandtii_NFATC3_10015104
I
0.000
Myotis_brandtii_Nfatc4_10003693
Myotis brandtii
Myotis_brandtii_Nfatc4_10003693
I
0.000
Ogr08131
Ophisaurus gracilis
Ogr08131
I
0.000
Pvit_03343
Pogona vitticeps
Pvit_03343
I
0.000
Pvit_05133
Pogona vitticeps
Pvit_05133
I
0.000
Pvit_07799
Pogona vitticeps
Pvit_07799
I
0.000
nfatc3.S
Xenopus laevis
XB-GENE-866300
I
0.000
nfatc1
Xenopus tropicalis
XB-GENE-876756
D
0.000