HNF1B (Ochotona princeps)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSOPRG00000003933 T213713_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hnf1b
M00408_2.00 		Mus musculus
NNHWCNNN
NNNGWDNN		 PBM
Berger et al.(2008)
Tcf2_0913 		0.867 1.000
HNF1B
M03245_2.00 		Homo sapiens
GTTAATNATTAAY
RTTAATNATTAAC		 SELEX
Jolma et al.(2013)
HNF1B_1 		0.867 1.000
HNF1B
M03246_2.00 		Homo sapiens
NGTTAATNATTAAYN
NRTTAATNATTAACN		 SELEX
Jolma et al.(2013)
HNF1B_2 		0.867 1.000
HNF1B
M09168_2.00 		Homo sapiens
DGTTAATRATTAACH
DGTTAATYATTAACH		 Misc
Kulakovskiy et al.(2013)
HNF1B_HUMAN.H11MO.0.A 		0.867 1.000
Hnf1b
M09179_2.00 		Mus musculus
DGTTAATRATTAACH
DGTTAATYATTAACH		 Misc
Kulakovskiy et al.(2013)
HNF1B_MOUSE.H11MO.0.A 		0.867 1.000
HNF1B
M10758_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF1B_Q6_01 		0.867 1.000
HNF1B
M10759_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF1B_Q6 		0.867 1.000
HNF1B
M10760_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LFA1_Q6 		0.867 1.000
HNF1A
M03150_2.00 		Homo sapiens
NGTTAATNATTAAYN
NRTTAATNATTAACN		 SELEX
Jolma et al.(2013)
HNF1A_1 		0.866 0.945
HNF1A
M09144_2.00 		Homo sapiens
DGTTAATKATTAACH
DGTTAATMATTAACH		 Misc
Kulakovskiy et al.(2013)
HNF1A_HUMAN.H11MO.0.C 		0.866 0.945
HNF1A
M10690_2.00 		Homo sapiens
RGTTAATDWTTRMHV
BDKYAAWHATTAACY		 Transfac
Matys et al.(2006)
V$HNF1_01 		0.866 0.945
HNF1A
M10691_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF1A_Q4 		0.866 0.945
HNF1A
M10692_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF1A_Q5 		0.866 0.945
HNF1A
M10693_2.00 		Homo sapiens
DGBTAATBAWTHAMYWM
KWRKTDAWTVATTAVCH		 Transfac
Matys et al.(2006)
V$HNF1_C 		0.866 0.945
Hnf1a
M00171_2.00 		Mus musculus
HTAAYYNN
NNRRTTAD		 PBM
Badis et al.(2009)
Tcf1_2666 		0.859 0.927
Hnf1a
M00444_2.00 		Mus musculus
HTAAYYNNN
NNNRRTTAD		 PBM
Berger et al.(2008)
Tcf1_2666 		0.859 0.927
Hnf1a
M09191_2.00 		Mus musculus
RGTTAATNWTTDMHN
NDKHAAWNATTAACY		 Misc
Kulakovskiy et al.(2013)
HNF1A_MOUSE.H11MO.0.A 		0.859 0.927
Hmbox1
M00419_2.00 		Mus musculus
NNNGWNNN
NNNWCNNN		 PBM
Berger et al.(2008)
Hmbox1_2674 		0.638 0.382
HMBOX1
M03167_2.00 		Homo sapiens
BKTAACTARB
VYTAGTTAMV		 SELEX
Jolma et al.(2013)
HMBOX1_1 		0.638 0.382
HMBOX1
M05180_2.00 		Homo sapiens
BTAACYAGB
VCTRGTTAV		 SELEX
Yin et al.(2017)
HMBOX1_eDBD_HT-SELEX 		0.638 0.382
HMBOX1
M05181_2.00 		Homo sapiens
NTAACTAGB
VCTAGTTAN		 SELEX
Yin et al.(2017)
HMBOX1_eDBD_Methyl-HT-SELEX 		0.638 0.382
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000003616 Homeodomain 232 307

Links

Other Homeodomain family TFs
Other Ochotona princeps TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL008417 Aedes aegypti AAEL008417 N 0.000
AARA009694 Anopheles arabiensis AARA009694 N 0.000
ACAC_0000409101 Angiostrongylus cantonensis ACAC_0000409101 N 0.000
ACEP12759 Atta cephalotes ACEP12759 I 0.000
ACHR002403 Anopheles christyi ACHR002403 N 0.000
ACOC_0001323101 Angiostrongylus costaricensis ACOC_0001323101 N 0.000
ACOM033320 Anopheles coluzzii ACOM033320 N 0.000
ACUA003510 Anopheles culicifacies ACUA003510 N 0.000
ACYPI003297 Acyrthosiphon pisum ACYPI003297 I 0.000
AEPI008570 Anopheles epiroticus AEPI008570 N 0.000
AGAP004110 Anopheles gambiae AGAP004110 N 0.000
ALUE_0001851001 Ascaris lumbricoides ALUE_0001851001 N 0.000
AMAM021723 Anopheles maculatus AMAM021723 N 0.000
AMEC005071 Anopheles melas AMEC005071 N 0.000
AMEM002948 Anopheles merus AMEM002948 N 0.000
ANCCAN_29654 Ancylostoma caninum ANCCAN_29654 N 0.000
ANCCEY_08672 Ancylostoma ceylanicum ANCCEY_08672 N 0.000
AQUA009805 Anopheles quadriannulatus AQUA009805 N 0.000
ASIS023527 Anopheles sinensis ASIS023527 N 0.000
ASTEI04275 Anopheles stephensi ASTEI04275 N 0.000
ASU_10445 Ascaris suum ASU_10445 N 0.000
A_06553 Schistosoma haematobium A_06553 N 0.000
BGIBMGA013514 Bombyx mori BGIBMGA013514 N 0.000
CAOG_02676 Capsaspora owczarzaki CAOG_02676 N 0.000
CapteG178344 Capitella teleta CapteG178344 N 0.000
CapteG224864 Capitella teleta CapteG224864 I 0.000
CBN09380 Caenorhabditis brenneri CBN09380 N 0.000
ccdc124 Oryzias latipes ENSORLG00000015728 N 0.000
Cflo_06133--XP_394373.1_APIME Camponotus floridanus Cflo_06133--XP_394373.1_APIME I 0.000
cgd2_870 Cryptosporidium parvum cgd2_870 N 0.000
CGI_10019404 Crassostrea gigas CGI_10019404 N 0.000
CHD4 Microcebus murinus ENSMICG00000006588 N 0.000
CHD4 Ochotona princeps ENSOPRG00000003477 N 0.000
CHD4 Echinops telfairi ENSETEG00000005912 N 0.000
CJA05209 Caenorhabditis japonica CJA05209 N 0.000
CLEC002888 Cimex lectularius CLEC002888 N 0.000
CMU_009510 Cryptosporidium muris CMU_009510 N 0.000
CPIJ005084 Culex quinquefasciatus CPIJ005084 N 0.000
CpipJ_CPIJ005084 Culex pipiens CpipJ_CPIJ005084 N 0.000
CRE03905 Caenorhabditis remanei CRE03905 N 0.000
CY34DRAFT_106474 Suillus luteus CY34DRAFT_106474 N 0.000
D917_07703 Trichinella nativa D917_07703 N 0.000
D918_07944 Trichuris suis D918_07944 N 0.000
DAPPUDRAFT_303074 Daphnia pulex DAPPUDRAFT_303074 N 0.000
DICVIV_03175 Dictyocaulus viviparus DICVIV_03175 N 0.000
EMIHUDRAFT_117867 Emiliania huxleyi EMIHUDRAFT_117867 I 0.000
ENSCING00000023833 Ciona intestinalis ENSCING00000023833 N 0.000
ENSMODG00000024829 Monodelphis domestica ENSMODG00000024829 N 0.000
ENSSHAG00000004107 Sarcophilus harrisii ENSSHAG00000004107 N 0.000
estExt_fgenesh1_kg.C_80399 Phytophthora capsici estExt_fgenesh1_kg.C_80399 N 0.000
estExt_fgenesh2_pg.C_1070085 Branchiostoma floridae estExt_fgenesh2_pg.C_1070085 N 0.000
estExt_fgenesh2_pm.C_3240002 Branchiostoma floridae estExt_fgenesh2_pm.C_3240002 N 0.000
ETH_00032160 Eimeria tenella ETH_00032160 N 0.000
F443_19335 Phytophthora parasitica F443_19335 N 0.000
fgenesh1_pg.C_scaffold_73784000001 Phytophthora capsici fgenesh1_pg.C_scaffold_73784000001 N 0.000
fgenesh1_pm.2_#_13 Coccomyxa subellipsoidea C169 fgenesh1_pm.2_#_13 N 0.000
fgeneshCV_pg.C_scaffold_2000022 Chlorella vulgaris fgeneshCV_pg.C_scaffold_2000022 N 0.000
fgenesh_scip_prom.46568.2049 Phytophthora kernoviae fgenesh_scip_prom.46568.2049 N 0.000
GB50764 Apis mellifera GB50764 I 0.000
GE25578 Drosophila yakuba FBgn0242642 I 0.000
GG13363 Drosophila erecta FBgn0105635 N 0.000
GH18160 Drosophila grimshawi FBgn0125628 I 0.000
GK13574 Drosophila willistoni FBgn0215582 I 0.000
GLOINDRAFT_6870 Rhizophagus irregularis GLOINDRAFT_6870 N 0.000
GLYMA01G28820 Glycine max GLYMA01G28820 I 0.000
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.000
GPUH_0000676401 Gongylonema pulchrum GPUH_0000676401 N 0.000
GSTUM_00007488001 Tuber melanosporum GSTUM_00007488001 N 0.000
GUITHDRAFT_162866 Guillardia theta GUITHDRAFT_162866 N 0.000
HCOI00594600 Haemonchus contortus HCOI00594600 N 0.000
HelroG66455 Helobdella robusta HelroG66455 N 0.000
HHAL005242-PA Halyomorpha halys HHAL005242-PA I 0.000
HMEL009197 Heliconius melpomene HMEL009197 N 0.000
HPBE_0001252601 Heligmosomoides bakeri HPBE_0001252601 N 0.000
HPLM_0000348901 Haemonchus placei HPLM_0000348901 N 0.000
Hsal_04778--XP_394373.1_APIME Harpegnathos saltator Hsal_04778--XP_394373.1_APIME I 0.000
ISCW011313 Ixodes scapularis ISCW011313 N 0.000
KGM_20190 Danaus plexippus KGM_20190 I 0.000
LCUP006380 Lucilia cuprina LCUP006380 N 0.000
LotgiG105193 Lottia gigantea LotgiG105193 N 0.000
LotgiG126557 Lottia gigantea LotgiG126557 N 0.000
M404DRAFT_79773 Pisolithus tinctorius M404DRAFT_79773 N 0.000
M407DRAFT_16670 Tulasnella calospora M407DRAFT_16670 N 0.000
maker-nMf.1.1.scaf18285-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf18285-snap-gene-0.4 N 0.000
maker-pir_contig_430-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_430-fgenesh-gene-0.3 N 0.000
maker-piw_contig_1911-snap-gene-0.6 Pythium iwayamai maker-piw_contig_1911-snap-gene-0.6 N 0.000
MCINX012524 Melitaea cinxia MCINX012524 I 0.000
MDOA001488 Musca domestica MDOA001488 I 0.000
mgf012563m Mimulus guttatus mgf012563m I 0.000
MhA1_Contig1250.frz3.gene10 Meloidogyne hapla MhA1_Contig1250.frz3.gene10 N 0.000
Minc12734 Meloidogyne incognita Minc12734 N 0.000
ML11467a Mnemiopsis leidyi ML11467a N 0.000
Moror_16065 Moniliophthora roreri Moror_16065 I 0.000
MPER_07337 Moniliophthora perniciosa MPER_07337 N 0.000
MYCTH_2308522 Myceliophthora thermophila MYCTH_2308522 I 0.000
NBR_0000605501 Nippostrongylus brasiliensis NBR_0000605501 N 0.000
NECAME_12352 Necator americanus NECAME_12352 N 0.000
NEMVEDRAFT_v1g201358 Nematostella vectensis NEMVEDRAFT_v1g201358 I 0.000
NV13812 Nasonia vitripennis NV13812 I 0.000
Ocbimv22013575m.g Octopus bimaculoides Ocbimv22013575m.g I 0.000
OESDEN_05486 Oesophagostomum dentatum OESDEN_05486 N 0.000
PEQ_0000413701 Parascaris equorum PEQ_0000413701 N 0.000
PHACADRAFT_58554 Phanerochaete carnosa PHACADRAFT_58554 N 0.000
PHUM036320 Pediculus humanus PHUM036320 N 0.000
Physo132366 Phytophthora sojae Physo132366 N 0.000
PLICRDRAFT_179042 Plicaturopsis crispa PLICRDRAFT_179042 I 0.000
PTSG_02585 Salpingoeca rosetta PTSG_02585 N 0.000
PYU1_G003004 Pythium ultimum PYU1_G003004 N 0.000
RPRC009760 Rhodnius prolixus RPRC009760 N 0.000
S40285_07156 Stachybotrys chlorohalonata S40285_07156 N 0.000
S40288_05696 Stachybotrys chartarum S40288_05696 N 0.000
SBAD_0000307901 Soboliphyme baturini SBAD_0000307901 N 0.000
SINV12391 Solenopsis invicta SINV12391 I 0.000
Sjc_0011880 Schistosoma japonicum Sjc_0011880 N 0.000
Smp_004360 Schistosoma mansoni Smp_004360 N 0.000
SMRZ_0002114501 Schistosoma margrebowiei SMRZ_0002114501 N 0.000
SPPG_03193 Spizellomyces punctatus SPPG_03193 N 0.000
SPRG_06372 Saprolegnia parasitica SPRG_06372 N 0.000
TC004658 Tribolium castaneum TC004658 N 0.000
TCLT_0001081001 Thelazia callipaeda TCLT_0001081001 N 0.000
TELCIR_11967 Teladorsagia circumcincta TELCIR_11967 N 0.000
tetur18g00680 Tetranychus urticae tetur18g00680 I 0.000
TGME49_037260 Toxoplasma gondii TGME49_037260 N 0.000
THITE_22048 Thielavia terrestris THITE_22048 I 0.000
TMUE_s0148001000 Trichuris muris TMUE_s0148001000 N 0.000
TRE_0001918901 Trichobilharzia regenti TRE_0001918901 N 0.000
TTRE_0000309701 Trichuris trichiura TTRE_0000309701 N 0.000
XP_002941963 Xenopus tropicalis XP_002941963 N 0.000
Y73E7A.1 Caenorhabditis elegans WBGene00022268 N 0.000