HNF1B (Pteropus vampyrus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSPVAG00000010466 T215246_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hnf1b
M00408_2.00
Mus musculus
NNHWCNNN

NNNGWDNN
PBM
Berger et al.(2008)
Tcf2_0913
0.867 1.000
HNF1B
M03245_2.00
Homo sapiens
GTTAATNATTAAY

RTTAATNATTAAC
SELEX
Jolma et al.(2013)
HNF1B_1
0.867 1.000
HNF1B
M03246_2.00
Homo sapiens
NGTTAATNATTAAYN

NRTTAATNATTAACN
SELEX
Jolma et al.(2013)
HNF1B_2
0.867 1.000
HNF1B
M09168_2.00
Homo sapiens
DGTTAATRATTAACH

DGTTAATYATTAACH
Misc
Kulakovskiy et al.(2013)
HNF1B_HUMAN.H11MO.0.A
0.867 1.000
Hnf1b
M09179_2.00
Mus musculus
DGTTAATRATTAACH

DGTTAATYATTAACH
Misc
Kulakovskiy et al.(2013)
HNF1B_MOUSE.H11MO.0.A
0.867 1.000
HNF1B
M10758_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1B_Q6_01
0.867 1.000
HNF1B
M10759_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1B_Q6
0.867 1.000
HNF1B
M10760_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LFA1_Q6
0.867 1.000
HNF1A
M03150_2.00
Homo sapiens
NGTTAATNATTAAYN

NRTTAATNATTAACN
SELEX
Jolma et al.(2013)
HNF1A_1
0.866 0.945
HNF1A
M09144_2.00
Homo sapiens
DGTTAATKATTAACH

DGTTAATMATTAACH
Misc
Kulakovskiy et al.(2013)
HNF1A_HUMAN.H11MO.0.C
0.866 0.945
HNF1A
M10690_2.00
Homo sapiens
RGTTAATDWTTRMHV

BDKYAAWHATTAACY
Transfac
Matys et al.(2006)
V$HNF1_01
0.866 0.945
HNF1A
M10691_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1A_Q4
0.866 0.945
HNF1A
M10692_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF1A_Q5
0.866 0.945
HNF1A
M10693_2.00
Homo sapiens
DGBTAATBAWTHAMYWM

KWRKTDAWTVATTAVCH
Transfac
Matys et al.(2006)
V$HNF1_C
0.866 0.945
Hnf1a
M00171_2.00
Mus musculus
HTAAYYNN

NNRRTTAD
PBM
Badis et al.(2009)
Tcf1_2666
0.859 0.927
Hnf1a
M00444_2.00
Mus musculus
HTAAYYNNN

NNNRRTTAD
PBM
Berger et al.(2008)
Tcf1_2666
0.859 0.927
Hnf1a
M09191_2.00
Mus musculus
RGTTAATNWTTDMHN

NDKHAAWNATTAACY
Misc
Kulakovskiy et al.(2013)
HNF1A_MOUSE.H11MO.0.A
0.859 0.927
Hmbox1
M00419_2.00
Mus musculus
NNNGWNNN

NNNWCNNN
PBM
Berger et al.(2008)
Hmbox1_2674
0.638 0.382
HMBOX1
M03167_2.00
Homo sapiens
BKTAACTARB

VYTAGTTAMV
SELEX
Jolma et al.(2013)
HMBOX1_1
0.638 0.382
HMBOX1
M05180_2.00
Homo sapiens
BTAACYAGB

VCTRGTTAV
SELEX
Yin et al.(2017)
HMBOX1_eDBD_HT-SELEX
0.638 0.382
HMBOX1
M05181_2.00
Homo sapiens
NTAACTAGB

VCTAGTTAN
SELEX
Yin et al.(2017)
HMBOX1_eDBD_Methyl-HT-SELEX
0.638 0.382
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000009862 Homeodomain 232 307

Links

Other Homeodomain family TFs
Other Pteropus vampyrus TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1Q1_06955 Trichosporon asahii A1Q1_06955 N 0.000
AGABI2DRAFT_191645 Agaricus bisporus AGABI2DRAFT_191645 N 0.000
BN946_scf185043.g242 Trametes cinnabarina BN946_scf185043.g242 N 0.000
BOTBODRAFT_90657 Botryobasidium botryosum BOTBODRAFT_90657 N 0.000
CC1G_11400 Coprinopsis cinerea CC1G_11400 N 0.000
CERSUDRAFT_111715 Ceriporiopsis subvermispora CERSUDRAFT_111715 N 0.000
CNE04220 Cryptococcus neoformans CNE04220 N 0.000
e_gwh2.2.1019.1 Phanerochaete chrysosporium e_gwh2.2.1019.1 N 0.000
FOMPIDRAFT_1116461 Fomitopsis pinicola FOMPIDRAFT_1116461 N 0.000
GALMADRAFT_227586 Galerina marginata GALMADRAFT_227586 N 0.000
GLOTRDRAFT_119701 Gloeophyllum trabeum GLOTRDRAFT_119701 N 0.000
K443DRAFT_167654 Laccaria amethystina K443DRAFT_167654 N 0.000
L804_03290 Cryptococcus gattii L804_03290 N 0.000
M378DRAFT_22958 Amanita muscaria M378DRAFT_22958 N 0.000
M408DRAFT_53001 Serendipita vermifera M408DRAFT_53001 N 0.000
M408DRAFT_54305 Serendipita vermifera M408DRAFT_54305 N 0.000
M413DRAFT_292945 Hebeloma cylindrosporum M413DRAFT_292945 N 0.000
PHACADRAFT_250106 Phanerochaete carnosa PHACADRAFT_250106 N 0.000
PHLGIDRAFT_91671 Phlebiopsis gigantea PHLGIDRAFT_91671 N 0.000
PILCRDRAFT_819051 Piloderma croceum PILCRDRAFT_819051 N 0.000