CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Homez
(
Rattus norvegicus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSRNOG00000014887
T215408_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HOMEZ
M03242_2.00
Homo sapiens
WWWAATCGTTTW
WAAACGATTWWW
SELEX
Jolma et al.(2013)
HOMEZ_1
0.854
0.927
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000019979
Homeodomain
60
105
DGNEHLLQAFSYFPYPSLADIALLCLRHGLQMEKVKTWFMAQRLRC
ENSRNOP00000019979
Homeodomain
345
401
QRKTKRKTKEQLAILKSFFLQCQWARREDYHKLEQITGLPRPEIIQWFGDTRYALKH
ENSRNOP00000019979
Homeodomain
443
489
PPPPPDIRPLERYWAAHQQLQEADILKLSQASRLSTQQVLDWFDSRL
Links
Other
Homeodomain
family TFs
Other
Rattus norvegicus
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy