ENSSTOG00000014748 (Ictidomys tridecemlineatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSSTOG00000014748 T216005_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PBX2
M08134_2.00
Homo sapiens
NWGAKTGACABN

NVTGTCAMTCWN
ChIP-seq
Mathelier et al.(2014)
MA1113.1
0.867 1.000
PBX2
M09165_2.00
Homo sapiens
KRVHKTGATTGAWKN

NMWTCAATCAMDBYM
Misc
Kulakovskiy et al.(2013)
PBX2_HUMAN.H11MO.0.C
0.867 1.000
Pbx2
M09199_2.00
Mus musculus
KRVHKTGATTGAWKN

NMWTCAATCAMDBYM
Misc
Kulakovskiy et al.(2013)
PBX2_MOUSE.H11MO.0.C
0.867 1.000
pbx4
M02110_2.00
Tetraodon nigroviridis
TTGAYGDV

BHCRTCAA
PBM
Weirauch et al.(2014)
pTH6425
0.867 0.982
Pbx1
M00513_2.00
Mus musculus
NNDKANNNN

NNNNTMHNN
PBM
Berger et al.(2008)
Pbx1_3203
0.867 0.965
PBX1
M05362_2.00
Homo sapiens
NTGATKGAYR

YRTCMATCAN
SELEX
Yin et al.(2017)
PBX1_eDBD_HT-SELEX
0.867 0.965
PBX1
M05364_2.00
Homo sapiens
DTGMTKGRYN

NRYCMAKCAH
SELEX
Yin et al.(2017)
PBX1_FL_HT-SELEX
0.867 0.965
PBX1
M02685_2.00
Homo sapiens
WWTGATTGATND

HNATCAATCAWW
SELEX
Mathelier et al.(2014)
MA0070.1
0.867 0.965
PBX1
M09164_2.00
Homo sapiens
DGABTGRCRG

CYGYCAVTCH
Misc
Kulakovskiy et al.(2013)
PBX1_HUMAN.H11MO.0.A
0.867 0.965
PBX1
M09561_2.00
Homo sapiens
TGABTGACAGSC

GSCTGTCAVTCA
Misc
Heinz et al.(2010)
MCF7-PBX1_GSE28007
0.867 0.965
PBX1
M10748_2.00
Homo sapiens
WTKATTRDT

AHYAATMAW
Transfac
Matys et al.(2006)
V$PBX1_01
0.867 0.965
PBX1
M10749_2.00
Homo sapiens
DNHTTGATTGATKDB

VHMATCAATCAADNH
Transfac
Matys et al.(2006)
V$PBX1_02
0.867 0.965
PBX1
M10750_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX1_03
0.867 0.965
PBX1
M10751_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX1_05
0.867 0.965
PBX1
M10752_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX1_10
0.867 0.965
PBX1
M10753_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX1_Q3
0.867 0.965
PBX1
M05363_2.00
Homo sapiens
DTGAKKGAYG

CRTCMMTCAH
SELEX
Yin et al.(2017)
PBX1_eDBD_Methyl-HT-SELEX
0.867 0.965
PBX1
M05365_2.00
Homo sapiens
MRTCAATCMH

DKGATTGAYK
SELEX
Yin et al.(2017)
PBX1_FL_Methyl-HT-SELEX
0.867 0.965
Pbx3
M09205_2.00
Mus musculus
BBBTGATTGRYNDN

NHNRYCAATCAVVV
Misc
Kulakovskiy et al.(2013)
PBX3_MOUSE.H11MO.0.A
0.865 0.965
exd
M06487_2.00
Drosophila melanogaster
YRTCAAAN

NTTTGAYR
B1H
Mathelier et al.(2014)
MA0222.1
0.822 0.947
exd
M06243_2.00
Drosophila melanogaster
YRTCAAAN

NTTTGAYR
B1H
Zhu et al.(2011)
Exd_Cell_FBgn0000611
0.822 0.947
exd
M06244_2.00
Drosophila melanogaster
NWRNWYNAAA

TTTNRWNYWN
B1H
Zhu et al.(2011)
exd_FlyReg_FBgn0000611
0.822 0.947
exd
M06245_2.00
Drosophila melanogaster
NDTGAYRW

WYRTCAHN
B1H
Zhu et al.(2011)
exd_SOLEXA_2_FBgn0000611
0.822 0.947
exd
M06246_2.00
Drosophila melanogaster
NNDTGAYR

YRTCAHNN
B1H
Zhu et al.(2011)
Exd_SOLEXA_FBgn0000611
0.822 0.947
PBX4
M00277_2.00
Homo sapiens
NNDDWHDNNN

NNNHDWHHNN
PBM
Barrera et al.(2016)
PBX4_REF
0.815 0.912
PBX4
M10649_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX4_01
0.815 0.912
CBG10835
M01243_2.00
Caenorhabditis briggsae
NNTKAYDNN

NNHRTMANN
PBM
Lambert et al.(2019)
pTH11444
0.691 0.579
PBX4
M00276_2.00
Homo sapiens
NYTAATTADNN

NNHTAATTARN
PBM
Barrera et al.(2016)
PBX4_R215Q
0.677 0.895
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000013213 Homeodomain 245 304

Links

Other Homeodomain family TFs
Other Ictidomys tridecemlineatus TFs

435 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AGABI2DRAFT_70614 Agaricus bisporus AGABI2DRAFT_70614 N 0.000
AMAG_01384 Allomyces macrogynus AMAG_01384 I 0.000
AMAG_05583 Allomyces macrogynus AMAG_05583 I 0.000
M378DRAFT_184361 Amanita muscaria M378DRAFT_184361 N 0.000
AOL_s00043g47 Arthrobotrys oligospora AOL_s00043g47 N 0.000
AGOS_AFL085C Ashbya gossypii AGOS_AFL085C I 0.000
COCC4DRAFT_83005 Bipolaris maydis COCC4DRAFT_83005 I 0.000
COCMIDRAFT_99053 Bipolaris oryzae COCMIDRAFT_99053 I 0.000
COCSADRAFT_293960 Bipolaris sorokiniana COCSADRAFT_293960 I 0.000
COCVIDRAFT_105959 Bipolaris victoriae COCVIDRAFT_105959 I 0.000
COCCADRAFT_105318 Bipolaris zeicola COCCADRAFT_105318 I 0.000
Bostr.20129s0193 Boechera stricta Bostr.20129s0193 I 0.000
BOTBODRAFT_102648 Botryobasidium botryosum BOTBODRAFT_102648 I 0.000
Cagra.0096s0075 Capsella grandiflora Cagra.0096s0075 I 0.000
Carubv10021131m.g Capsella rubella Carubv10021131m.g I 0.000
CERSUDRAFT_48013 Ceriporiopsis subvermispora CERSUDRAFT_48013 N 0.000
CMO187C Cyanidioschyzon merolae CMO187C I 0.000
DACRYDRAFT_21288 Dacryopinax sp DACRYDRAFT_21288 I 0.000
H072_3239 Dactylellina haptotyla H072_3239 N 0.000
DICSQDRAFT_139749 Dichomitus squalens DICSQDRAFT_139749 I 0.000
DOTSEDRAFT_72541 Dothistroma septosporum DOTSEDRAFT_72541 I 0.000
DRE_06964 Drechslerella stenobrocha DRE_06964 I 0.000
Ecym_2208 Eremothecium cymbalariae Ecym_2208 I 0.000
Ecym_7474 Eremothecium cymbalariae Ecym_7474 I 0.000
FIBRA_03155 Fibroporia radiculosa FIBRA_03155 I 0.000
FOMPIDRAFT_1134545 Fomitopsis pinicola FOMPIDRAFT_1134545 I 0.000
GALMADRAFT_60919 Galerina marginata GALMADRAFT_60919 N 0.000
GLOTRDRAFT_39410 Gloeophyllum trabeum GLOTRDRAFT_39410 N 0.000
GYMLUDRAFT_144307 Gymnopus luxurians GYMLUDRAFT_144307 N 0.000
M413DRAFT_74768 Hebeloma cylindrosporum M413DRAFT_74768 N 0.000
gw1.2.1743.1 Heterobasidion annosum gw1.2.1743.1 I 0.000
HETIRDRAFT_242938 Heterobasidion irregulare HETIRDRAFT_242938 I 0.000
HETIRDRAFT_244333 Heterobasidion irregulare HETIRDRAFT_244333 N 0.000
ISCW017545 Ixodes scapularis ISCW017545 N 0.000
JAAARDRAFT_122806 Jaapia argillacea JAAARDRAFT_122806 I 0.000
PAS_chr2-1_0026 Komagataella pastoris PAS_chr2-1_0026 I 0.000
K443DRAFT_90832 Laccaria amethystina K443DRAFT_90832 I 0.000
LACBIDRAFT_150048 Laccaria bicolor LACBIDRAFT_150048 I 0.000
LEMA_P023210.1 Leptosphaeria maculans LEMA_P023210.1 I 0.000
MELLADRAFT_31826 Melampsora laricipopulina MELLADRAFT_31826 N 0.000
MELLADRAFT_42736 Melampsora laricipopulina MELLADRAFT_42736 I 0.000
MVLG_00322 Microbotryum violaceum MVLG_00322 I 0.000
E5Q_05471 Mixia osmundae E5Q_05471 I 0.000
E5Q_06685 Mixia osmundae E5Q_06685 I 0.000
ML078939a Mnemiopsis leidyi ML078939a I 0.000
Moror_17043 Moniliophthora roreri Moror_17043 N 0.000
e_gw1.1.2474.1 Mucor circinelloides e_gw1.1.2474.1 I 0.000
fgeneshMC_pg.4_#_769 Mucor circinelloides fgeneshMC_pg.4_#_769 I 0.000
estExt_Genewise1.C_20646 Mucor circinelloides estExt_Genewise1.C_20646 I 0.000
gw1.1.2475.1 Mucor circinelloides gw1.1.2475.1 I 0.000
gw1.5.1361.1 Mucor circinelloides gw1.5.1361.1 N 0.000
gw1.8.772.1 Mucor circinelloides gw1.8.772.1 N 0.000
e_gw1.8.771.1 Mucor circinelloides e_gw1.8.771.1 N 0.000
gw1.8.770.1 Mucor circinelloides gw1.8.770.1 N 0.000
estExt_Genewise1Plus.C_12171 Mucor circinelloides estExt_Genewise1Plus.C_12171 N 0.000
NCAS_0D03780 Naumovozyma castellii NCAS_0D03780 I 0.000
GSPATT00036105001 Paramecium tetraurelia GSPATT00036105001 N 0.000
PAXINDRAFT_87057 Paxillus involutus PAXINDRAFT_87057 N 0.000
PAXRUDRAFT_149609 Paxillus rubicundulus PAXRUDRAFT_149609 N 0.000
PAXRUDRAFT_162335 Paxillus rubicundulus PAXRUDRAFT_162335 I 0.000
Pc21g14490 Penicillium chrysogenum Pc21g14490 I 0.000
PDIP_47800 Penicillium digitatum PDIP_47800 I 0.000
PEX1_103830 Penicillium expansum PEX1_103830 I 0.000
PITC_050180 Penicillium italicum PITC_050180 I 0.000
PMAA_039580 Penicillium marneffei PMAA_039580 I 0.000
PCH_Pc21g14490 Penicillium rubens PCH_Pc21g14490 I 0.000
U727_00430730201 Penicillium solitum U727_00430730201 I 0.000
SNOG_09038 Phaeosphaeria nodorum SNOG_09038 I 0.000
PHACADRAFT_264175 Phanerochaete carnosa PHACADRAFT_264175 I 0.000
fgenesh1_pg.C_scaffold_3000687 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_3000687 I 0.000
fgeneshPB_pg.46__69 Phycomyces blakesleeanus fgeneshPB_pg.46__69 I 0.000
XP_002490906.1 Pichia pastoris XP_002490906.1 I 0.000
gww1.3.1.288.1 Pichia stipitis gww1.3.1.288.1 I 0.000
PILCRDRAFT_30307 Piloderma croceum PILCRDRAFT_30307 N 0.000
PIIN_04679 Piriformospora indica PIIN_04679 I 0.000
PIIN_01911 Piriformospora indica PIIN_01911 I 0.000
PISMIDRAFT_648350 Pisolithus microcarpus PISMIDRAFT_648350 N 0.000
M404DRAFT_161564 Pisolithus tinctorius M404DRAFT_161564 N 0.000
PLEOSDRAFT_1046174 Pleurotus ostreatus PLEOSDRAFT_1046174 I 0.000
PLEOSDRAFT_1043224 Pleurotus ostreatus PLEOSDRAFT_1043224 N 0.000
POSPLDRAFT_96258 Postia placenta POSPLDRAFT_96258 I 0.000
PAN0_017c5548 Pseudozyma antarctica PAN0_017c5548 I 0.000
PaG_01262 Pseudozyma aphidis PaG_01262 I 0.000
PSEUBRA_SCAF21g03367 Pseudozyma brasiliensis PSEUBRA_SCAF21g03367 I 0.000
PFL1_05375 Pseudozyma flocculosa PFL1_05375 I 0.000
PHSY_005564 Pseudozyma hubeiensis PHSY_005564 I 0.000
PGTG_00887 Puccinia graminis PGTG_00887 I 0.000
PGTG_02256 Puccinia graminis PGTG_02256 I 0.000
PTTG_04989 Puccinia triticina PTTG_04989 N 0.000
V565_035120 Rhizoctonia solani V565_035120 N 0.000
GLOINDRAFT_71916 Rhizophagus irregularis GLOINDRAFT_71916 N 0.000
RO3G_15483 Rhizopus oryzae RO3G_15483 N 0.000
RO3G_12112 Rhizopus oryzae RO3G_12112 I 0.000
RO3G_05814 Rhizopus oryzae RO3G_05814 I 0.000
RO3G_03231 Rhizopus oryzae RO3G_03231 N 0.000
RHTO_06861 Rhodosporidium toruloides RHTO_06861 I 0.000
7991_YGL073W Saccharomyces bayanus 7991_YGL073W I 0.000
Scas_Contig720.20 Saccharomyces castellii Scas_Contig720.20 I 0.000
AACERI_AaceriAFL085C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFL085C I 0.000
PICST_16323 Scheffersomyces stipitis PICST_16323 I 0.000
SCHCODRAFT_269941 Schizophyllum commune SCHCODRAFT_269941 I 0.000
SCLCIDRAFT_106370 Scleroderma citrinum SCLCIDRAFT_106370 I 0.000
M408DRAFT_38378 Serendipita vermifera M408DRAFT_38378 N 0.000
SERLA73DRAFT_66913 Serpula lacrymans SERLA73DRAFT_66913 N 0.000
SETTUDRAFT_26712 Setosphaeria turcica SETTUDRAFT_26712 I 0.000
SPAPADRAFT_61457 Spathaspora passalidarum SPAPADRAFT_61457 I 0.000
SEPMUDRAFT_126550 Sphaerulina musiva SEPMUDRAFT_126550 I 0.000
SPPG_03494 Spizellomyces punctatus SPPG_03494 N 0.000
SPPG_01116 Spizellomyces punctatus SPPG_01116 I 0.000
SPPG_05445 Spizellomyces punctatus SPPG_05445 I 0.000
sr10015 Sporisorium reilianum sr10015 I 0.000
fgenesh1_pg.C_scaffold_8000068 Sporobolomyces roseus fgenesh1_pg.C_scaffold_8000068 I 0.000
SPU_019455 Strongylocentrotus purpuratus SPU_019455 N 0.000
CY34DRAFT_62325 Suillus luteus CY34DRAFT_62325 N 0.000
CY34DRAFT_22472 Suillus luteus CY34DRAFT_22472 N 0.000
PMAA_039580 Talaromyces marneffei PMAA_039580 I 0.000
TSTA_079210 Talaromyces stipitatus TSTA_079210 I 0.000
K437DRAFT_224239 Tilletiaria anomala K437DRAFT_224239 I 0.000
BN946_scf185014.g98 Trametes cinnabarina BN946_scf185014.g98 I 0.000
BN946_scf184851.g74 Trametes cinnabarina BN946_scf184851.g74 I 0.000
TRIREDRAFT_78688 Trichoderma reesei TRIREDRAFT_78688 I 0.000
TriadG23376 Trichoplax adhaerens TriadG23376 I 0.000
GSTUM_00004466001 Tuber melanosporum GSTUM_00004466001 N 0.000
M407DRAFT_35594 Tulasnella calospora M407DRAFT_35594 I 0.000
UHOR_08093 Ustilago hordei UHOR_08093 I 0.000
UM05274 Ustilago maydis UM05274 I 0.000
J056_001839 Wallemia ichthyophaga J056_001839 I 0.000
WALSEDRAFT_18221 Wallemia sebi WALSEDRAFT_18221 N 0.000